RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
CDK5RAP3-230ENST00000584042 PLCH2O75038 1416 aa25.61■■□□□ 1.69
CDK5RAP3-230ENST00000584042 ARHGAP5Q13017 1502 aa25.6■■□□□ 1.69
CDK5RAP3-230ENST00000584042 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
CDK5RAP3-230ENST00000584042 CFAP74Q9C0B2 1584 aa25.58■■□□□ 1.69
CDK5RAP3-230ENST00000584042 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
CDK5RAP3-230ENST00000584042 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
CDK5RAP3-230ENST00000584042 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
CDK5RAP3-230ENST00000584042 CD109Q6YHK3 1445 aa25.53■■□□□ 1.68
CDK5RAP3-230ENST00000584042 PLEKHH2Q8IVE3 1493 aa25.51■■□□□ 1.67
CDK5RAP3-230ENST00000584042 ABCC1P33527 1531 aa25.51■■□□□ 1.67
CDK5RAP3-230ENST00000584042 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
CDK5RAP3-230ENST00000584042 FANCAO15360 1455 aa25.49■■□□□ 1.67
CDK5RAP3-230ENST00000584042 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
CDK5RAP3-230ENST00000584042 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
CDK5RAP3-230ENST00000584042 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
CDK5RAP3-230ENST00000584042 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
CDK5RAP3-230ENST00000584042 SYCP2Q9BX26 1530 aa25.45■■□□□ 1.66
CDK5RAP3-230ENST00000584042 NEO1Q92859 1461 aa25.45■■□□□ 1.66
CDK5RAP3-230ENST00000584042 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
CDK5RAP3-230ENST00000584042 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
CDK5RAP3-230ENST00000584042 EFCAB2Q5VUJ9 269 aa25.44■■□□□ 1.66
CDK5RAP3-230ENST00000584042 TEX14Q8IWB6 1497 aa25.42■■□□□ 1.66
CDK5RAP3-230ENST00000584042 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
CDK5RAP3-230ENST00000584042 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
CDK5RAP3-230ENST00000584042 DAPK1P53355 1430 aa25.4■■□□□ 1.66
CDK5RAP3-230ENST00000584042 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
CDK5RAP3-230ENST00000584042 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.66
CDK5RAP3-230ENST00000584042 ADGRL1O94910 1474 aa25.39■■□□□ 1.65
CDK5RAP3-230ENST00000584042 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
CDK5RAP3-230ENST00000584042 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
CDK5RAP3-230ENST00000584042 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
CDK5RAP3-230ENST00000584042 ADGBQ8N7X0 1667 aa25.37■■□□□ 1.65
CDK5RAP3-230ENST00000584042 ABCC5O15440 1437 aa25.37■■□□□ 1.65
CDK5RAP3-230ENST00000584042 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
CDK5RAP3-230ENST00000584042 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
CDK5RAP3-230ENST00000584042 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
CDK5RAP3-230ENST00000584042 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
CDK5RAP3-230ENST00000584042 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
CDK5RAP3-230ENST00000584042 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
CDK5RAP3-230ENST00000584042 POGZQ7Z3K3 1410 aa25.29■■□□□ 1.64
CDK5RAP3-230ENST00000584042 KDM5CP41229 1560 aa25.28■■□□□ 1.64
CDK5RAP3-230ENST00000584042 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
CDK5RAP3-230ENST00000584042 SCAPERQ9BY12 1400 aa25.28■■□□□ 1.64
CDK5RAP3-230ENST00000584042 ZNF518AQ6AHZ1 1483 aa25.28■■□□□ 1.64
CDK5RAP3-230ENST00000584042 C9orf84Q5VXU9 1444 aa25.27■■□□□ 1.64
CDK5RAP3-230ENST00000584042 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
CDK5RAP3-230ENST00000584042 RICTORQ6R327 1708 aa25.26■■□□□ 1.63
CDK5RAP3-230ENST00000584042 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
CDK5RAP3-230ENST00000584042 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
CDK5RAP3-230ENST00000584042 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
CDK5RAP3-230ENST00000584042 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
CDK5RAP3-230ENST00000584042 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
CDK5RAP3-230ENST00000584042 ITGAEP38570 1179 aa25.24■■□□□ 1.63
CDK5RAP3-230ENST00000584042 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
CDK5RAP3-230ENST00000584042 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
CDK5RAP3-230ENST00000584042 HFM1A2PYH4 1435 aa25.21■■□□□ 1.63
CDK5RAP3-230ENST00000584042 HECW2Q9P2P5 1572 aa25.2■■□□□ 1.62
CDK5RAP3-230ENST00000584042 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
CDK5RAP3-230ENST00000584042 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
CDK5RAP3-230ENST00000584042 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
CDK5RAP3-230ENST00000584042 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
CDK5RAP3-230ENST00000584042 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
CDK5RAP3-230ENST00000584042 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
CDK5RAP3-230ENST00000584042 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
CDK5RAP3-230ENST00000584042 NCOA1Q15788 1441 aa25.16■■□□□ 1.62
CDK5RAP3-230ENST00000584042 NAIPQ13075 1403 aa25.15■■□□□ 1.62
CDK5RAP3-230ENST00000584042 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
CDK5RAP3-230ENST00000584042 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
CDK5RAP3-230ENST00000584042 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
CDK5RAP3-230ENST00000584042 SPAG9O60271 1321 aaKnown RBP25.12■■□□□ 1.61
CDK5RAP3-230ENST00000584042 CHIC2Q9UKJ5 165 aa25.11■■□□□ 1.61
CDK5RAP3-230ENST00000584042 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CDK5RAP3-230ENST00000584042 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
CDK5RAP3-230ENST00000584042 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.61
CDK5RAP3-230ENST00000584042 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
CDK5RAP3-230ENST00000584042 KDM6BO15054 1643 aa25.07■■□□□ 1.6
CDK5RAP3-230ENST00000584042 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
CDK5RAP3-230ENST00000584042 COL17A1Q9UMD9 1497 aaPredicted RBP25.06■■□□□ 1.6
CDK5RAP3-230ENST00000584042 DIP2CQ9Y2E4 1556 aa25.05■■□□□ 1.6
CDK5RAP3-230ENST00000584042 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
CDK5RAP3-230ENST00000584042 RRP7BPQ9NSQ0 103 aa25.04■■□□□ 1.6
CDK5RAP3-230ENST00000584042 ARHGEF40Q8TER5 1519 aa25.03■■□□□ 1.6
CDK5RAP3-230ENST00000584042 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
CDK5RAP3-230ENST00000584042 EIF2AK4Q9P2K8 1649 aaKnown RBP25.02■■□□□ 1.6
CDK5RAP3-230ENST00000584042 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
CDK5RAP3-230ENST00000584042 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
CDK5RAP3-230ENST00000584042 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
CDK5RAP3-230ENST00000584042 HRCP23327 699 aa24.98■■□□□ 1.59
CDK5RAP3-230ENST00000584042 BCORL1Q5H9F3 1711 aa24.97■■□□□ 1.59
CDK5RAP3-230ENST00000584042 UNC13BO14795 1591 aa24.96■■□□□ 1.59
CDK5RAP3-230ENST00000584042 A2MP01023 1474 aa24.96■■□□□ 1.59
CDK5RAP3-230ENST00000584042 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
CDK5RAP3-230ENST00000584042 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
CDK5RAP3-230ENST00000584042 DEPDC5O75140 1603 aa24.93■■□□□ 1.58
CDK5RAP3-230ENST00000584042 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
CDK5RAP3-230ENST00000584042 KDM5DQ9BY66 1539 aa24.91■■□□□ 1.58
CDK5RAP3-230ENST00000584042 MYT1LQ9UL68 1186 aa24.91■■□□□ 1.58
CDK5RAP3-230ENST00000584042 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
CDK5RAP3-230ENST00000584042 ATP10AO60312 1499 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms