RNA–Protein interactions for RNA: ENST00000582469.1

SMG8-206, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 1,144 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-206ENST00000582469 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
SMG8-206ENST00000582469 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
SMG8-206ENST00000582469 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
SMG8-206ENST00000582469 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
SMG8-206ENST00000582469 G3V3G9 751 aa12.84□□□□□ -0.35
SMG8-206ENST00000582469 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
SMG8-206ENST00000582469 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
SMG8-206ENST00000582469 E2F4Q16254 413 aa12.83□□□□□ -0.36
SMG8-206ENST00000582469 KIF3CO14782 793 aa12.81□□□□□ -0.36
SMG8-206ENST00000582469 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
SMG8-206ENST00000582469 NBR1Q14596 966 aa12.79□□□□□ -0.36
SMG8-206ENST00000582469 FOXK1P85037 733 aa12.78□□□□□ -0.36
SMG8-206ENST00000582469 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
SMG8-206ENST00000582469 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
SMG8-206ENST00000582469 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
SMG8-206ENST00000582469 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
SMG8-206ENST00000582469 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
SMG8-206ENST00000582469 DSG2Q14126 1118 aa12.75□□□□□ -0.37
SMG8-206ENST00000582469 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
SMG8-206ENST00000582469 LHX8Q68G74 356 aa12.71□□□□□ -0.37
SMG8-206ENST00000582469 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
SMG8-206ENST00000582469 PLPP6Q8IY26 295 aa12.68□□□□□ -0.38
SMG8-206ENST00000582469 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
SMG8-206ENST00000582469 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
SMG8-206ENST00000582469 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
SMG8-206ENST00000582469 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
SMG8-206ENST00000582469 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
SMG8-206ENST00000582469 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
SMG8-206ENST00000582469 DPYSL4O14531 572 aa12.55□□□□□ -0.4
SMG8-206ENST00000582469 SEMA3EO15041 775 aa12.55□□□□□ -0.4
SMG8-206ENST00000582469 SPDYE16A6NNV3 312 aaPredicted RBP12.54□□□□□ -0.4
SMG8-206ENST00000582469 SLC34A2O95436 690 aa12.54□□□□□ -0.4
SMG8-206ENST00000582469 PDIA6Q15084 440 aa12.54□□□□□ -0.4
SMG8-206ENST00000582469 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
SMG8-206ENST00000582469 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
SMG8-206ENST00000582469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMG8-206ENST00000582469 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
SMG8-206ENST00000582469 MAP3K9P80192 1104 aa12.48□□□□□ -0.41
SMG8-206ENST00000582469 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
SMG8-206ENST00000582469 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
SMG8-206ENST00000582469 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMG8-206ENST00000582469 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
SMG8-206ENST00000582469 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
SMG8-206ENST00000582469 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
SMG8-206ENST00000582469 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
SMG8-206ENST00000582469 TBC1D12O60347 775 aa12.43□□□□□ -0.42
SMG8-206ENST00000582469 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
SMG8-206ENST00000582469 PTGER2P43116 358 aa12.42□□□□□ -0.42
SMG8-206ENST00000582469 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
SMG8-206ENST00000582469 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
SMG8-206ENST00000582469 EVI5O60447 810 aa12.39□□□□□ -0.43
SMG8-206ENST00000582469 KDM4FA0A1W2PPD8 638 aa12.38□□□□□ -0.43
SMG8-206ENST00000582469 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
SMG8-206ENST00000582469 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
SMG8-206ENST00000582469 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
SMG8-206ENST00000582469 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
SMG8-206ENST00000582469 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
SMG8-206ENST00000582469 OSBPP22059 807 aa12.3□□□□□ -0.44
SMG8-206ENST00000582469 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
SMG8-206ENST00000582469 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
SMG8-206ENST00000582469 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
SMG8-206ENST00000582469 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
SMG8-206ENST00000582469 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
SMG8-206ENST00000582469 SNPHO15079 494 aa12.29□□□□□ -0.44
SMG8-206ENST00000582469 DDX12PQ92771 950 aa12.27□□□□□ -0.45
SMG8-206ENST00000582469 PHF14O94880 888 aa12.25□□□□□ -0.45
SMG8-206ENST00000582469 ARSIQ5FYB1 569 aa12.25□□□□□ -0.45
SMG8-206ENST00000582469 ZMYND10O75800 440 aa12.23□□□□□ -0.45
SMG8-206ENST00000582469 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
SMG8-206ENST00000582469 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
SMG8-206ENST00000582469 EPAS1Q99814 870 aa12.23□□□□□ -0.45
SMG8-206ENST00000582469 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
SMG8-206ENST00000582469 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMG8-206ENST00000582469 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
SMG8-206ENST00000582469 GPR37O15354 613 aa12.21□□□□□ -0.45
SMG8-206ENST00000582469 NUDT7P0C024 238 aa12.21□□□□□ -0.45
SMG8-206ENST00000582469 PCDHGA10Q9Y5H3 936 aa12.21□□□□□ -0.45
SMG8-206ENST00000582469 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
SMG8-206ENST00000582469 FOSBP53539 338 aa12.2□□□□□ -0.46
SMG8-206ENST00000582469 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
SMG8-206ENST00000582469 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
SMG8-206ENST00000582469 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
SMG8-206ENST00000582469 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
SMG8-206ENST00000582469 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
SMG8-206ENST00000582469 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
SMG8-206ENST00000582469 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
SMG8-206ENST00000582469 PTGDRQ13258 359 aa12.11□□□□□ -0.47
SMG8-206ENST00000582469 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
SMG8-206ENST00000582469 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
SMG8-206ENST00000582469 FCHSD2O94868 740 aa12.1□□□□□ -0.47
SMG8-206ENST00000582469 MAP3K7O43318 606 aa12.09□□□□□ -0.47
SMG8-206ENST00000582469 HIC1Q14526 733 aa12.09□□□□□ -0.47
SMG8-206ENST00000582469 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
SMG8-206ENST00000582469 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
SMG8-206ENST00000582469 GNPATO15228 680 aa12.07□□□□□ -0.48
SMG8-206ENST00000582469 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
SMG8-206ENST00000582469 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
SMG8-206ENST00000582469 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
SMG8-206ENST00000582469 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
SMG8-206ENST00000582469 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms