RNA–Protein interactions for RNA: ENST00000581442.5

GAPLINC-204, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 450 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-204ENST00000581442 RIMBP2O15034 1052 aa8.67□□□□□ -1.02
GAPLINC-204ENST00000581442 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
GAPLINC-204ENST00000581442 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
GAPLINC-204ENST00000581442 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
GAPLINC-204ENST00000581442 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
GAPLINC-204ENST00000581442 EMP3P54852 163 aa8.65□□□□□ -1.02
GAPLINC-204ENST00000581442 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
GAPLINC-204ENST00000581442 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
GAPLINC-204ENST00000581442 MARVELD3Q96A59 401 aa8.63□□□□□ -1.03
GAPLINC-204ENST00000581442 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
GAPLINC-204ENST00000581442 KIF3CO14782 793 aa8.62□□□□□ -1.03
GAPLINC-204ENST00000581442 HOXB1P14653 301 aaPredicted RBP8.61□□□□□ -1.03
GAPLINC-204ENST00000581442 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
GAPLINC-204ENST00000581442 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
GAPLINC-204ENST00000581442 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
GAPLINC-204ENST00000581442 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
GAPLINC-204ENST00000581442 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
GAPLINC-204ENST00000581442 GPR153Q6NV75 609 aa8.53□□□□□ -1.04
GAPLINC-204ENST00000581442 SLC34A2O95436 690 aa8.52□□□□□ -1.05
GAPLINC-204ENST00000581442 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
GAPLINC-204ENST00000581442 ERBB3P21860 1342 aa8.52□□□□□ -1.05
GAPLINC-204ENST00000581442 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
GAPLINC-204ENST00000581442 NCKAP5LQ9HCH0 1330 aa8.51□□□□□ -1.05
GAPLINC-204ENST00000581442 FOXK1P85037 733 aa8.5□□□□□ -1.05
GAPLINC-204ENST00000581442 DSG2Q14126 1118 aa8.5□□□□□ -1.05
GAPLINC-204ENST00000581442 POTEB3A0JP26 581 aa8.49□□□□□ -1.05
GAPLINC-204ENST00000581442 POTEBQ6S5H4 581 aa8.49□□□□□ -1.05
GAPLINC-204ENST00000581442 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
GAPLINC-204ENST00000581442 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
GAPLINC-204ENST00000581442 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
GAPLINC-204ENST00000581442 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
GAPLINC-204ENST00000581442 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
GAPLINC-204ENST00000581442 SPRYD3Q8NCJ5 442 aa8.47□□□□□ -1.05
GAPLINC-204ENST00000581442 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
GAPLINC-204ENST00000581442 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
GAPLINC-204ENST00000581442 PCDHGA4Q9Y5G9 962 aa8.45□□□□□ -1.06
GAPLINC-204ENST00000581442 ZNF316A6NFI3 1004 aaPredicted RBP8.44□□□□□ -1.06
GAPLINC-204ENST00000581442 PDE4AP27815 886 aa8.44□□□□□ -1.06
GAPLINC-204ENST00000581442 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
GAPLINC-204ENST00000581442 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
GAPLINC-204ENST00000581442 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
GAPLINC-204ENST00000581442 PPP1R15BQ5SWA1 713 aa8.43□□□□□ -1.06
GAPLINC-204ENST00000581442 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
GAPLINC-204ENST00000581442 NUDT7P0C024 238 aa8.42□□□□□ -1.06
GAPLINC-204ENST00000581442 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
GAPLINC-204ENST00000581442 PTCD2Q8WV60 388 aaKnown RBP8.42□□□□□ -1.06
GAPLINC-204ENST00000581442 MFSD10Q14728 455 aa8.41□□□□□ -1.06
GAPLINC-204ENST00000581442 SPNS2Q8IVW8 549 aa8.41□□□□□ -1.06
GAPLINC-204ENST00000581442 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
GAPLINC-204ENST00000581442 TBC1D12O60347 775 aa8.4□□□□□ -1.06
GAPLINC-204ENST00000581442 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
GAPLINC-204ENST00000581442 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
GAPLINC-204ENST00000581442 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
GAPLINC-204ENST00000581442 UPF1Q92900 1129 aaKnown RBP eCLIP8.37□□□□□ -1.07
GAPLINC-204ENST00000581442 PBX2P40425 430 aa8.36□□□□□ -1.07
GAPLINC-204ENST00000581442 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
GAPLINC-204ENST00000581442 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
GAPLINC-204ENST00000581442 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
GAPLINC-204ENST00000581442 PTGER2P43116 358 aa8.32□□□□□ -1.08
GAPLINC-204ENST00000581442 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
GAPLINC-204ENST00000581442 TSHZ2Q9NRE2 1034 aa8.3□□□□□ -1.08
GAPLINC-204ENST00000581442 LSM11P83369 360 aaKnown RBP eCLIP8.29□□□□□ -1.08
GAPLINC-204ENST00000581442 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
GAPLINC-204ENST00000581442 POTEEQ6S8J3 1075 aa8.27□□□□□ -1.09
GAPLINC-204ENST00000581442 EVI5O60447 810 aa8.26□□□□□ -1.09
GAPLINC-204ENST00000581442 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
GAPLINC-204ENST00000581442 ANKRD13DQ6ZTN6 518 aa8.26□□□□□ -1.09
GAPLINC-204ENST00000581442 KCNH8Q96L42 1107 aa8.26□□□□□ -1.09
GAPLINC-204ENST00000581442 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
GAPLINC-204ENST00000581442 ARHGAP33O14559 1287 aa8.25□□□□□ -1.09
GAPLINC-204ENST00000581442 DPYSL4O14531 572 aa8.24□□□□□ -1.09
GAPLINC-204ENST00000581442 RNF166Q96A37 237 aaPredicted RBP8.24□□□□□ -1.09
GAPLINC-204ENST00000581442 MYT1LQ9UL68 1186 aa8.24□□□□□ -1.09
GAPLINC-204ENST00000581442 AXIN2Q9Y2T1 843 aa8.24□□□□□ -1.09
GAPLINC-204ENST00000581442 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
GAPLINC-204ENST00000581442 FOSBP53539 338 aa8.21□□□□□ -1.1
GAPLINC-204ENST00000581442 E2F4Q16254 413 aa8.21□□□□□ -1.1
GAPLINC-204ENST00000581442 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
GAPLINC-204ENST00000581442 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
GAPLINC-204ENST00000581442 WDR70Q9NW82 654 aa8.21□□□□□ -1.1
GAPLINC-204ENST00000581442 TK2O00142 265 aa8.2□□□□□ -1.1
GAPLINC-204ENST00000581442 PSEN2P49810 448 aa8.19□□□□□ -1.1
GAPLINC-204ENST00000581442 ADGRD1Q6QNK2 874 aa8.19□□□□□ -1.1
GAPLINC-204ENST00000581442 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
GAPLINC-204ENST00000581442 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
GAPLINC-204ENST00000581442 DMRTA1Q5VZB9 504 aa8.17□□□□□ -1.1
GAPLINC-204ENST00000581442 PTPREP23469 700 aa8.16□□□□□ -1.1
GAPLINC-204ENST00000581442 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
GAPLINC-204ENST00000581442 PCDHGA10Q9Y5H3 936 aa8.16□□□□□ -1.1
GAPLINC-204ENST00000581442 PDIA6Q15084 440 aa8.15□□□□□ -1.1
GAPLINC-204ENST00000581442 ADAM33Q9BZ11 813 aa8.15□□□□□ -1.1
GAPLINC-204ENST00000581442 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
GAPLINC-204ENST00000581442 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
GAPLINC-204ENST00000581442 PHF14O94880 888 aa8.13□□□□□ -1.11
GAPLINC-204ENST00000581442 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
GAPLINC-204ENST00000581442 HRO43593 1189 aa8.12□□□□□ -1.11
GAPLINC-204ENST00000581442 DDX12PQ92771 950 aa8.12□□□□□ -1.11
GAPLINC-204ENST00000581442 SPDYE16A6NNV3 312 aaPredicted RBP8.11□□□□□ -1.11
GAPLINC-204ENST00000581442 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
GAPLINC-204ENST00000581442 KCNV2Q8TDN2 545 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms