RNA–Protein interactions for RNA: ENST00000581290.1

AP003028.1-202, humanhuman

TSL 5

Gene AP003028.1, Length 415 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-202ENST00000581290 KIF12Q96FN5 646 aa8.3□□□□□ -1.08
AP003028.1-202ENST00000581290 CHRDL2Q6WN34 429 aa8.29□□□□□ -1.08
AP003028.1-202ENST00000581290 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
AP003028.1-202ENST00000581290 SPDYE16A6NNV3 312 aaPredicted RBP8.25□□□□□ -1.09
AP003028.1-202ENST00000581290 PRKAR2AP13861 404 aaKnown RBP8.25□□□□□ -1.09
AP003028.1-202ENST00000581290 PPP1R15BQ5SWA1 713 aa8.24□□□□□ -1.09
AP003028.1-202ENST00000581290 GOLGA2Q08379 1002 aa8.23□□□□□ -1.09
AP003028.1-202ENST00000581290 TRIM26Q12899 539 aaPredicted RBP8.22□□□□□ -1.09
AP003028.1-202ENST00000581290 MKRN3Q13064 507 aaKnown RBP8.21□□□□□ -1.1
AP003028.1-202ENST00000581290 PDIA6Q15084 440 aa8.21□□□□□ -1.1
AP003028.1-202ENST00000581290 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
AP003028.1-202ENST00000581290 GPHNQ9NQX3 736 aaPredicted RBP8.21□□□□□ -1.1
AP003028.1-202ENST00000581290 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
AP003028.1-202ENST00000581290 DPYSL4O14531 572 aa8.2□□□□□ -1.1
AP003028.1-202ENST00000581290 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
AP003028.1-202ENST00000581290 GPR37O15354 613 aa8.19□□□□□ -1.1
AP003028.1-202ENST00000581290 FLIIQ13045 1269 aa8.19□□□□□ -1.1
AP003028.1-202ENST00000581290 ARID3AQ99856 593 aa8.19□□□□□ -1.1
AP003028.1-202ENST00000581290 MINK1Q8N4C8 1332 aaPredicted RBP8.19□□□□□ -1.1
AP003028.1-202ENST00000581290 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
AP003028.1-202ENST00000581290 TMEM106CQ9BVX2 250 aa8.17□□□□□ -1.1
AP003028.1-202ENST00000581290 EMILIN3Q9NT22 766 aa8.17□□□□□ -1.1
AP003028.1-202ENST00000581290 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
AP003028.1-202ENST00000581290 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
AP003028.1-202ENST00000581290 HRCP23327 699 aa8.15□□□□□ -1.1
AP003028.1-202ENST00000581290 FXR2P51116 673 aaKnown RBP eCLIP8.15□□□□□ -1.1
AP003028.1-202ENST00000581290 IRF6O14896 467 aa8.14□□□□□ -1.11
AP003028.1-202ENST00000581290 AMHR2Q16671 573 aa8.14□□□□□ -1.11
AP003028.1-202ENST00000581290 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
AP003028.1-202ENST00000581290 APBB1O00213 710 aa8.13□□□□□ -1.11
AP003028.1-202ENST00000581290 DSG2Q14126 1118 aa8.12□□□□□ -1.11
AP003028.1-202ENST00000581290 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
AP003028.1-202ENST00000581290 GOPCQ9HD26 462 aa8.12□□□□□ -1.11
AP003028.1-202ENST00000581290 ZRANB1Q9UGI0 708 aa8.12□□□□□ -1.11
AP003028.1-202ENST00000581290 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
AP003028.1-202ENST00000581290 ARID3CA6NKF2 412 aa8.11□□□□□ -1.11
AP003028.1-202ENST00000581290 ILDR1Q86SU0 546 aaPredicted RBP8.11□□□□□ -1.11
AP003028.1-202ENST00000581290 PHF12Q96QT6 1004 aa8.1□□□□□ -1.11
AP003028.1-202ENST00000581290 A6NJR5 290 aa8.09□□□□□ -1.11
AP003028.1-202ENST00000581290 GNPATO15228 680 aa8.09□□□□□ -1.11
AP003028.1-202ENST00000581290 TMC2Q8TDI7 906 aa8.09□□□□□ -1.11
AP003028.1-202ENST00000581290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.09□□□□□ -1.11
AP003028.1-202ENST00000581290 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
AP003028.1-202ENST00000581290 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
AP003028.1-202ENST00000581290 FOXK1P85037 733 aa8.08□□□□□ -1.12
AP003028.1-202ENST00000581290 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
AP003028.1-202ENST00000581290 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
AP003028.1-202ENST00000581290 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
AP003028.1-202ENST00000581290 FCHSD2O94868 740 aa8.07□□□□□ -1.12
AP003028.1-202ENST00000581290 HIC1Q14526 733 aa8.07□□□□□ -1.12
AP003028.1-202ENST00000581290 CD44P16070 742 aaKnown RBP8.06□□□□□ -1.12
AP003028.1-202ENST00000581290 ZBTB7CA1YPR0 619 aa8.05□□□□□ -1.12
AP003028.1-202ENST00000581290 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
AP003028.1-202ENST00000581290 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
AP003028.1-202ENST00000581290 TRAK2O60296 914 aa8.04□□□□□ -1.12
AP003028.1-202ENST00000581290 OSBPP22059 807 aa8.04□□□□□ -1.12
AP003028.1-202ENST00000581290 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
AP003028.1-202ENST00000581290 PLPP6Q8IY26 295 aa8.04□□□□□ -1.12
AP003028.1-202ENST00000581290 TRPC6Q9Y210 931 aa8.04□□□□□ -1.12
AP003028.1-202ENST00000581290 HAX1O00165 279 aa8.03□□□□□ -1.12
AP003028.1-202ENST00000581290 MICALL2Q8IY33 904 aa8.03□□□□□ -1.12
AP003028.1-202ENST00000581290 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
AP003028.1-202ENST00000581290 TIE1P35590 1138 aa8.02□□□□□ -1.13
AP003028.1-202ENST00000581290 PIP4P2Q8N4L2 257 aa8.01□□□□□ -1.13
AP003028.1-202ENST00000581290 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
AP003028.1-202ENST00000581290 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
AP003028.1-202ENST00000581290 TTLL13PA6NNM8 815 aa8□□□□□ -1.13
AP003028.1-202ENST00000581290 FECHP22830 423 aa8□□□□□ -1.13
AP003028.1-202ENST00000581290 PTGER2P43116 358 aa8□□□□□ -1.13
AP003028.1-202ENST00000581290 GIGYF2Q6Y7W6 1299 aaKnown RBP8□□□□□ -1.13
AP003028.1-202ENST00000581290 CCDC9Q9Y3X0 531 aaKnown RBP8□□□□□ -1.13
AP003028.1-202ENST00000581290 MCM6Q14566 821 aa7.99□□□□□ -1.13
AP003028.1-202ENST00000581290 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
AP003028.1-202ENST00000581290 DPY19L2Q6NUT2 758 aa7.99□□□□□ -1.13
AP003028.1-202ENST00000581290 MS4A1P11836 297 aa7.98□□□□□ -1.13
AP003028.1-202ENST00000581290 C2orf72A6NCS6 295 aa7.97□□□□□ -1.13
AP003028.1-202ENST00000581290 KIF3CO14782 793 aa7.96□□□□□ -1.14
AP003028.1-202ENST00000581290 PTGDRQ13258 359 aa7.96□□□□□ -1.14
AP003028.1-202ENST00000581290 DDX12PQ92771 950 aa7.96□□□□□ -1.14
AP003028.1-202ENST00000581290 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
AP003028.1-202ENST00000581290 TMEM121BQ9BXQ6 578 aaPredicted RBP7.95□□□□□ -1.14
AP003028.1-202ENST00000581290 CLCN1P35523 988 aa7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 OXER1Q8TDS5 423 aa7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 NECTIN2Q92692 538 aa7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 UPF1Q92900 1129 aaKnown RBP eCLIP7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 BMP2KQ9NSY1 1161 aaPredicted RBP7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
AP003028.1-202ENST00000581290 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
AP003028.1-202ENST00000581290 G3V3G9 751 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 RAD21O60216 631 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 TBC1D12O60347 775 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 PDCD7Q8N8D1 485 aaKnown RBP7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 REPIN1Q9BWE0 567 aaKnown RBP7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 SERPINA10Q9UK55 444 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
AP003028.1-202ENST00000581290 PRIM1P49642 420 aaKnown RBP7.91□□□□□ -1.14
AP003028.1-202ENST00000581290 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
AP003028.1-202ENST00000581290 TRAIPQ9BWF2 469 aa7.91□□□□□ -1.14
AP003028.1-202ENST00000581290 ZNF777Q9ULD5 760 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms