RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 RGS20O76081 388 aa9.87□□□□□ -0.83
KPNB1-208ENST00000580019 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
KPNB1-208ENST00000580019 AXIN2Q9Y2T1 843 aa9.83□□□□□ -0.84
KPNB1-208ENST00000580019 FKBP8Q14318 412 aa9.82□□□□□ -0.84
KPNB1-208ENST00000580019 ADGRD1Q6QNK2 874 aa9.82□□□□□ -0.84
KPNB1-208ENST00000580019 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
KPNB1-208ENST00000580019 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
KPNB1-208ENST00000580019 NUDT7P0C024 238 aa9.77□□□□□ -0.85
KPNB1-208ENST00000580019 CIZ1Q9ULV3 898 aaPredicted RBP9.77□□□□□ -0.85
KPNB1-208ENST00000580019 SOX12O15370 315 aa9.76□□□□□ -0.85
KPNB1-208ENST00000580019 LHX6Q9UPM6 363 aa9.76□□□□□ -0.85
KPNB1-208ENST00000580019 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
KPNB1-208ENST00000580019 TK2O00142 265 aa9.73□□□□□ -0.85
KPNB1-208ENST00000580019 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
KPNB1-208ENST00000580019 KCTD12Q96CX2 325 aaKnown RBP9.72□□□□□ -0.85
KPNB1-208ENST00000580019 IFFO2Q5TF58 517 aa9.71□□□□□ -0.86
KPNB1-208ENST00000580019 HRO43593 1189 aa9.7□□□□□ -0.86
KPNB1-208ENST00000580019 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
KPNB1-208ENST00000580019 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
KPNB1-208ENST00000580019 SPOCK2Q92563 424 aa9.67□□□□□ -0.86
KPNB1-208ENST00000580019 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
KPNB1-208ENST00000580019 PCDHGA4Q9Y5G9 962 aa9.67□□□□□ -0.86
KPNB1-208ENST00000580019 A0A0G2JS52 829 aa9.65□□□□□ -0.86
KPNB1-208ENST00000580019 SLC34A2O95436 690 aa9.64□□□□□ -0.87
KPNB1-208ENST00000580019 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
KPNB1-208ENST00000580019 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
KPNB1-208ENST00000580019 KIF3CO14782 793 aa9.61□□□□□ -0.87
KPNB1-208ENST00000580019 PTPN5P54829 565 aa9.61□□□□□ -0.87
KPNB1-208ENST00000580019 Q6ZNB5 142 aa9.61□□□□□ -0.87
KPNB1-208ENST00000580019 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
KPNB1-208ENST00000580019 PSEN2P49810 448 aa9.59□□□□□ -0.87
KPNB1-208ENST00000580019 NLRP6P59044 892 aa9.57□□□□□ -0.88
KPNB1-208ENST00000580019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
KPNB1-208ENST00000580019 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
KPNB1-208ENST00000580019 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
KPNB1-208ENST00000580019 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
KPNB1-208ENST00000580019 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
KPNB1-208ENST00000580019 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
KPNB1-208ENST00000580019 FBXO22Q8NEZ5 403 aa9.5□□□□□ -0.89
KPNB1-208ENST00000580019 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
KPNB1-208ENST00000580019 KDM4FA0A1W2PPD8 638 aa9.48□□□□□ -0.89
KPNB1-208ENST00000580019 THSD4Q6ZMP0 1018 aa9.48□□□□□ -0.89
KPNB1-208ENST00000580019 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
KPNB1-208ENST00000580019 VPS9D1Q9Y2B5 631 aa9.47□□□□□ -0.89
KPNB1-208ENST00000580019 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
KPNB1-208ENST00000580019 GOLGA8CPA6NN73 597 aa9.42□□□□□ -0.9
KPNB1-208ENST00000580019 LAPTM4AQ15012 233 aa9.42□□□□□ -0.9
KPNB1-208ENST00000580019 PTCD2Q8WV60 388 aaKnown RBP9.42□□□□□ -0.9
KPNB1-208ENST00000580019 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
KPNB1-208ENST00000580019 WNT2BQ93097 391 aa9.4□□□□□ -0.9
KPNB1-208ENST00000580019 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
KPNB1-208ENST00000580019 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
KPNB1-208ENST00000580019 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
KPNB1-208ENST00000580019 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
KPNB1-208ENST00000580019 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
KPNB1-208ENST00000580019 LCE2BO14633 110 aa9.34□□□□□ -0.91
KPNB1-208ENST00000580019 MRPL50Q8N5N7 158 aaKnown RBP9.34□□□□□ -0.91
KPNB1-208ENST00000580019 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
KPNB1-208ENST00000580019 TBC1D12O60347 775 aa9.33□□□□□ -0.92
KPNB1-208ENST00000580019 TAOK2Q9UL54 1235 aa9.31□□□□□ -0.92
KPNB1-208ENST00000580019 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
KPNB1-208ENST00000580019 GFRA3O60609 400 aa9.28□□□□□ -0.92
KPNB1-208ENST00000580019 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
KPNB1-208ENST00000580019 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
KPNB1-208ENST00000580019 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
KPNB1-208ENST00000580019 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
KPNB1-208ENST00000580019 PTPREP23469 700 aa9.24□□□□□ -0.93
KPNB1-208ENST00000580019 FOXK1P85037 733 aa9.24□□□□□ -0.93
KPNB1-208ENST00000580019 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
KPNB1-208ENST00000580019 KCNC4Q03721 635 aa9.22□□□□□ -0.93
KPNB1-208ENST00000580019 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
KPNB1-208ENST00000580019 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
KPNB1-208ENST00000580019 NRG2O14511 850 aaPredicted RBP9.2□□□□□ -0.94
KPNB1-208ENST00000580019 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
KPNB1-208ENST00000580019 STK25O00506 426 aa9.18□□□□□ -0.94
KPNB1-208ENST00000580019 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-208ENST00000580019 FOSBP53539 338 aa9.15□□□□□ -0.94
KPNB1-208ENST00000580019 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
KPNB1-208ENST00000580019 PPP1R37O75864 691 aa9.13□□□□□ -0.95
KPNB1-208ENST00000580019 BCAMP50895 628 aa9.13□□□□□ -0.95
KPNB1-208ENST00000580019 DSG2Q14126 1118 aa9.13□□□□□ -0.95
KPNB1-208ENST00000580019 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
KPNB1-208ENST00000580019 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
KPNB1-208ENST00000580019 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
KPNB1-208ENST00000580019 JPH4Q96JJ6 628 aa9.08□□□□□ -0.96
KPNB1-208ENST00000580019 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
KPNB1-208ENST00000580019 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
KPNB1-208ENST00000580019 UPF1Q92900 1129 aaKnown RBP eCLIP9.07□□□□□ -0.96
KPNB1-208ENST00000580019 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
KPNB1-208ENST00000580019 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
KPNB1-208ENST00000580019 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
KPNB1-208ENST00000580019 PPP1R3GB7ZBB8 358 aa9.04□□□□□ -0.96
KPNB1-208ENST00000580019 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
KPNB1-208ENST00000580019 ZFRQ96KR1 1074 aaKnown RBP9.03□□□□□ -0.96
KPNB1-208ENST00000580019 PROX2Q3B8N5 592 aa9.01□□□□□ -0.97
KPNB1-208ENST00000580019 ANO8Q9HCE9 1232 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-208ENST00000580019 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
KPNB1-208ENST00000580019 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
KPNB1-208ENST00000580019 EVI5O60447 810 aa8.95□□□□□ -0.98
KPNB1-208ENST00000580019 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms