RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-205ENST00000577667 SOX12O15370 315 aa10.4□□□□□ -0.74
PPP4R1-205ENST00000577667 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-205ENST00000577667 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
PPP4R1-205ENST00000577667 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
PPP4R1-205ENST00000577667 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
PPP4R1-205ENST00000577667 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
PPP4R1-205ENST00000577667 MS4A4AQ96JQ5 239 aa10.35□□□□□ -0.75
PPP4R1-205ENST00000577667 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
PPP4R1-205ENST00000577667 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
PPP4R1-205ENST00000577667 NLRP6P59044 892 aa10.33□□□□□ -0.76
PPP4R1-205ENST00000577667 GPR153Q6NV75 609 aa10.33□□□□□ -0.76
PPP4R1-205ENST00000577667 MFRPQ9BY79 579 aa10.32□□□□□ -0.76
PPP4R1-205ENST00000577667 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
PPP4R1-205ENST00000577667 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
PPP4R1-205ENST00000577667 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
PPP4R1-205ENST00000577667 HS6ST3Q8IZP7 471 aa10.3□□□□□ -0.76
PPP4R1-205ENST00000577667 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-205ENST00000577667 PTGER2P43116 358 aa10.22□□□□□ -0.77
PPP4R1-205ENST00000577667 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
PPP4R1-205ENST00000577667 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
PPP4R1-205ENST00000577667 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
PPP4R1-205ENST00000577667 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
PPP4R1-205ENST00000577667 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
PPP4R1-205ENST00000577667 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
PPP4R1-205ENST00000577667 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
PPP4R1-205ENST00000577667 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
PPP4R1-205ENST00000577667 PPP1R37O75864 691 aa10.14□□□□□ -0.79
PPP4R1-205ENST00000577667 LSM11P83369 360 aaKnown RBP eCLIP10.13□□□□□ -0.79
PPP4R1-205ENST00000577667 RTN4Q9NQC3 1192 aaKnown RBP10.12□□□□□ -0.79
PPP4R1-205ENST00000577667 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
PPP4R1-205ENST00000577667 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
PPP4R1-205ENST00000577667 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
PPP4R1-205ENST00000577667 KIF3CO14782 793 aa10.05□□□□□ -0.8
PPP4R1-205ENST00000577667 PBX2P40425 430 aa10.04□□□□□ -0.8
PPP4R1-205ENST00000577667 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
PPP4R1-205ENST00000577667 GTPBP6O43824 516 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-205ENST00000577667 NUDT7P0C024 238 aa10.02□□□□□ -0.81
PPP4R1-205ENST00000577667 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
PPP4R1-205ENST00000577667 AXIN2Q9Y2T1 843 aa10.02□□□□□ -0.81
PPP4R1-205ENST00000577667 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
PPP4R1-205ENST00000577667 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
PPP4R1-205ENST00000577667 SLC34A2O95436 690 aa9.97□□□□□ -0.81
PPP4R1-205ENST00000577667 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
PPP4R1-205ENST00000577667 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-205ENST00000577667 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-205ENST00000577667 FOXK1P85037 733 aa9.92□□□□□ -0.82
PPP4R1-205ENST00000577667 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
PPP4R1-205ENST00000577667 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
PPP4R1-205ENST00000577667 DSG2Q14126 1118 aa9.9□□□□□ -0.82
PPP4R1-205ENST00000577667 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
PPP4R1-205ENST00000577667 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
PPP4R1-205ENST00000577667 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
PPP4R1-205ENST00000577667 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
PPP4R1-205ENST00000577667 HRO43593 1189 aa9.87□□□□□ -0.83
PPP4R1-205ENST00000577667 TK2O00142 265 aa9.86□□□□□ -0.83
PPP4R1-205ENST00000577667 PDE4AP27815 886 aa9.85□□□□□ -0.83
PPP4R1-205ENST00000577667 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
PPP4R1-205ENST00000577667 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
PPP4R1-205ENST00000577667 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
PPP4R1-205ENST00000577667 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
PPP4R1-205ENST00000577667 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
PPP4R1-205ENST00000577667 PTCD2Q8WV60 388 aaKnown RBP9.83□□□□□ -0.84
PPP4R1-205ENST00000577667 PSEN2P49810 448 aa9.82□□□□□ -0.84
PPP4R1-205ENST00000577667 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
PPP4R1-205ENST00000577667 LARP6Q9BRS8 491 aaKnown RBP9.81□□□□□ -0.84
PPP4R1-205ENST00000577667 KCTD12Q96CX2 325 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-205ENST00000577667 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-205ENST00000577667 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-205ENST00000577667 TBC1D12O60347 775 aa9.77□□□□□ -0.85
PPP4R1-205ENST00000577667 MFSD10Q14728 455 aa9.77□□□□□ -0.85
PPP4R1-205ENST00000577667 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
PPP4R1-205ENST00000577667 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
PPP4R1-205ENST00000577667 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
PPP4R1-205ENST00000577667 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
PPP4R1-205ENST00000577667 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
PPP4R1-205ENST00000577667 RGS20O76081 388 aa9.69□□□□□ -0.86
PPP4R1-205ENST00000577667 IFFO2Q5TF58 517 aa9.69□□□□□ -0.86
PPP4R1-205ENST00000577667 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
PPP4R1-205ENST00000577667 PTPN5P54829 565 aa9.68□□□□□ -0.86
PPP4R1-205ENST00000577667 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
PPP4R1-205ENST00000577667 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
PPP4R1-205ENST00000577667 MAP3K9P80192 1104 aa9.65□□□□□ -0.86
PPP4R1-205ENST00000577667 EVI5O60447 810 aa9.64□□□□□ -0.87
PPP4R1-205ENST00000577667 IRX2Q9BZI1 471 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-205ENST00000577667 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
PPP4R1-205ENST00000577667 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
PPP4R1-205ENST00000577667 BHMG1C9JSJ3 638 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-205ENST00000577667 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
PPP4R1-205ENST00000577667 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
PPP4R1-205ENST00000577667 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-205ENST00000577667 A0A0G2JS52 829 aa9.6□□□□□ -0.87
PPP4R1-205ENST00000577667 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
PPP4R1-205ENST00000577667 DPYSL4O14531 572 aa9.59□□□□□ -0.87
PPP4R1-205ENST00000577667 FOSBP53539 338 aa9.59□□□□□ -0.87
PPP4R1-205ENST00000577667 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
PPP4R1-205ENST00000577667 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
PPP4R1-205ENST00000577667 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
PPP4R1-205ENST00000577667 E2F4Q16254 413 aa9.55□□□□□ -0.88
PPP4R1-205ENST00000577667 TSHZ2Q9NRE2 1034 aa9.55□□□□□ -0.88
PPP4R1-205ENST00000577667 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms