RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 PPP1R15BQ5SWA1 713 aa17.56■□□□□ 0.4
ITGAE-208ENST00000572433 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
ITGAE-208ENST00000572433 SEMA3EO15041 775 aa17.54■□□□□ 0.4
ITGAE-208ENST00000572433 G3V3G9 751 aa17.52■□□□□ 0.4
ITGAE-208ENST00000572433 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
ITGAE-208ENST00000572433 PLCG2P16885 1265 aa17.49■□□□□ 0.39
ITGAE-208ENST00000572433 SMYD5Q6GMV2 418 aa17.49■□□□□ 0.39
ITGAE-208ENST00000572433 BOLA1Q9Y3E2 137 aa17.49■□□□□ 0.39
ITGAE-208ENST00000572433 GABBR2O75899 941 aa17.48■□□□□ 0.39
ITGAE-208ENST00000572433 TMEM121BQ9BXQ6 578 aaPredicted RBP17.45■□□□□ 0.38
ITGAE-208ENST00000572433 DSG2Q14126 1118 aa17.43■□□□□ 0.38
ITGAE-208ENST00000572433 DCBLD2Q96PD2 775 aa17.43■□□□□ 0.38
ITGAE-208ENST00000572433 L3MBTL3Q96JM7 780 aaPredicted RBP17.42■□□□□ 0.38
ITGAE-208ENST00000572433 FOXK1P85037 733 aa17.41■□□□□ 0.38
ITGAE-208ENST00000572433 SEC24BO95487 1268 aa17.38■□□□□ 0.37
ITGAE-208ENST00000572433 ZC3H15Q8WU90 426 aaKnown RBP17.35■□□□□ 0.37
ITGAE-208ENST00000572433 C2orf72A6NCS6 295 aa17.34■□□□□ 0.37
ITGAE-208ENST00000572433 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
ITGAE-208ENST00000572433 SPDYE16A6NNV3 312 aaPredicted RBP17.33■□□□□ 0.36
ITGAE-208ENST00000572433 DPYSL4O14531 572 aa17.33■□□□□ 0.36
ITGAE-208ENST00000572433 PLPP6Q8IY26 295 aa17.33■□□□□ 0.36
ITGAE-208ENST00000572433 KIF3CO14782 793 aa17.32■□□□□ 0.36
ITGAE-208ENST00000572433 POTEHQ6S545 545 aa17.32■□□□□ 0.36
ITGAE-208ENST00000572433 SLC39A7Q92504 469 aa17.32■□□□□ 0.36
ITGAE-208ENST00000572433 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
ITGAE-208ENST00000572433 PDIA6Q15084 440 aa17.28■□□□□ 0.36
ITGAE-208ENST00000572433 C7P10643 843 aa17.27■□□□□ 0.36
ITGAE-208ENST00000572433 COLQQ9Y215 455 aaPredicted RBP17.27■□□□□ 0.36
ITGAE-208ENST00000572433 MLLT3P42568 568 aaPredicted RBP17.24■□□□□ 0.35
ITGAE-208ENST00000572433 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
ITGAE-208ENST00000572433 METRNQ9UJH8 293 aa17.18■□□□□ 0.34
ITGAE-208ENST00000572433 ZMYND10O75800 440 aa17.17■□□□□ 0.34
ITGAE-208ENST00000572433 TMEM92Q6UXU6 159 aa17.17■□□□□ 0.34
ITGAE-208ENST00000572433 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
ITGAE-208ENST00000572433 GPIHBP1Q8IV16 184 aa17.16■□□□□ 0.34
ITGAE-208ENST00000572433 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
ITGAE-208ENST00000572433 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
ITGAE-208ENST00000572433 SLC24A3Q9HC58 644 aa17.13■□□□□ 0.33
ITGAE-208ENST00000572433 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGAE-208ENST00000572433 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
ITGAE-208ENST00000572433 OXER1Q8TDS5 423 aa17.1■□□□□ 0.33
ITGAE-208ENST00000572433 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
ITGAE-208ENST00000572433 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
ITGAE-208ENST00000572433 TBC1D12O60347 775 aa17.06■□□□□ 0.32
ITGAE-208ENST00000572433 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
ITGAE-208ENST00000572433 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
ITGAE-208ENST00000572433 GRXCR2A6NFK2 248 aa17.03■□□□□ 0.32
ITGAE-208ENST00000572433 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
ITGAE-208ENST00000572433 NEUROD2Q15784 382 aa17■□□□□ 0.31
ITGAE-208ENST00000572433 PTGER2P43116 358 aa16.99■□□□□ 0.31
ITGAE-208ENST00000572433 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
ITGAE-208ENST00000572433 AK7Q96M32 723 aa16.97■□□□□ 0.31
ITGAE-208ENST00000572433 EVI5O60447 810 aa16.96■□□□□ 0.31
ITGAE-208ENST00000572433 PTCD2Q8WV60 388 aaKnown RBP16.96■□□□□ 0.31
ITGAE-208ENST00000572433 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
ITGAE-208ENST00000572433 SLC34A2O95436 690 aa16.94■□□□□ 0.3
ITGAE-208ENST00000572433 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
ITGAE-208ENST00000572433 OSBPP22059 807 aa16.92■□□□□ 0.3
ITGAE-208ENST00000572433 DDX12PQ92771 950 aa16.92■□□□□ 0.3
ITGAE-208ENST00000572433 GPR37O15354 613 aa16.9■□□□□ 0.3
ITGAE-208ENST00000572433 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
ITGAE-208ENST00000572433 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
ITGAE-208ENST00000572433 FCHSD2O94868 740 aa16.82■□□□□ 0.28
ITGAE-208ENST00000572433 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
ITGAE-208ENST00000572433 HIC1Q14526 733 aa16.8■□□□□ 0.28
ITGAE-208ENST00000572433 TRIM66O15016 1216 aa16.79■□□□□ 0.28
ITGAE-208ENST00000572433 GNPATO15228 680 aa16.79■□□□□ 0.28
ITGAE-208ENST00000572433 MAP2K5Q13163 448 aa16.78■□□□□ 0.28
ITGAE-208ENST00000572433 EPAS1Q99814 870 aa16.77■□□□□ 0.28
ITGAE-208ENST00000572433 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
ITGAE-208ENST00000572433 PHF14O94880 888 aa16.76■□□□□ 0.27
ITGAE-208ENST00000572433 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
ITGAE-208ENST00000572433 PDE4DQ08499 809 aa16.74■□□□□ 0.27
ITGAE-208ENST00000572433 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
ITGAE-208ENST00000572433 IRF6O14896 467 aa16.71■□□□□ 0.27
ITGAE-208ENST00000572433 PTGDRQ13258 359 aa16.71■□□□□ 0.27
ITGAE-208ENST00000572433 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.27
ITGAE-208ENST00000572433 GPBP1L1Q9HC44 474 aaPredicted RBP16.71■□□□□ 0.27
ITGAE-208ENST00000572433 EN1Q05925 392 aaPredicted RBP16.7■□□□□ 0.26
ITGAE-208ENST00000572433 CCDC102AQ96A19 550 aa16.7■□□□□ 0.26
ITGAE-208ENST00000572433 KDM4CQ9H3R0 1056 aa16.68■□□□□ 0.26
ITGAE-208ENST00000572433 MAP3K7O43318 606 aa16.67■□□□□ 0.26
ITGAE-208ENST00000572433 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
ITGAE-208ENST00000572433 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
ITGAE-208ENST00000572433 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
ITGAE-208ENST00000572433 PCDHGA10Q9Y5H3 936 aa16.66■□□□□ 0.26
ITGAE-208ENST00000572433 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
ITGAE-208ENST00000572433 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
ITGAE-208ENST00000572433 FECHP22830 423 aa16.63■□□□□ 0.25
ITGAE-208ENST00000572433 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
ITGAE-208ENST00000572433 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
ITGAE-208ENST00000572433 RBM33Q96EV2 1170 aaKnown RBP16.62■□□□□ 0.25
ITGAE-208ENST00000572433 SCUBE2Q9NQ36 999 aa16.62■□□□□ 0.25
ITGAE-208ENST00000572433 AMHR2Q16671 573 aa16.61■□□□□ 0.25
ITGAE-208ENST00000572433 MAMSTRQ6ZN01 415 aa16.61■□□□□ 0.25
ITGAE-208ENST00000572433 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
ITGAE-208ENST00000572433 CDHR5Q9HBB8 845 aa16.6■□□□□ 0.25
ITGAE-208ENST00000572433 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
ITGAE-208ENST00000572433 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
ITGAE-208ENST00000572433 FOSBP53539 338 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms