RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 POGZQ7Z3K3 1410 aa24.55■■□□□ 1.52
RAB40B-203ENST00000570676 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
RAB40B-203ENST00000570676 SIGLEC1Q9BZZ2 1709 aa24.54■■□□□ 1.52
RAB40B-203ENST00000570676 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
RAB40B-203ENST00000570676 ARHGAP5Q13017 1502 aa24.51■■□□□ 1.51
RAB40B-203ENST00000570676 SCAPERQ9BY12 1400 aa24.51■■□□□ 1.51
RAB40B-203ENST00000570676 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
RAB40B-203ENST00000570676 MAGI2Q86UL8 1455 aa24.49■■□□□ 1.51
RAB40B-203ENST00000570676 MADDQ8WXG6 1647 aa24.49■■□□□ 1.51
RAB40B-203ENST00000570676 YEATS2Q9ULM3 1422 aa24.48■■□□□ 1.51
RAB40B-203ENST00000570676 KDM5CP41229 1560 aa24.46■■□□□ 1.51
RAB40B-203ENST00000570676 HECW2Q9P2P5 1572 aa24.46■■□□□ 1.51
RAB40B-203ENST00000570676 CEP162Q5TB80 1403 aa24.44■■□□□ 1.5
RAB40B-203ENST00000570676 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
RAB40B-203ENST00000570676 EFCAB2Q5VUJ9 269 aa24.44■■□□□ 1.5
RAB40B-203ENST00000570676 ABCC1P33527 1531 aa24.43■■□□□ 1.5
RAB40B-203ENST00000570676 PTPRMP28827 1452 aa24.41■■□□□ 1.5
RAB40B-203ENST00000570676 ZNF518AQ6AHZ1 1483 aa24.41■■□□□ 1.5
RAB40B-203ENST00000570676 RIMS1Q86UR5 1692 aaKnown RBP24.4■■□□□ 1.5
RAB40B-203ENST00000570676 ARHGEF12Q9NZN5 1544 aa24.36■■□□□ 1.49
RAB40B-203ENST00000570676 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
RAB40B-203ENST00000570676 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
RAB40B-203ENST00000570676 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
RAB40B-203ENST00000570676 ABCA6Q8N139 1617 aa24.34■■□□□ 1.49
RAB40B-203ENST00000570676 C9orf84Q5VXU9 1444 aa24.34■■□□□ 1.49
RAB40B-203ENST00000570676 FER1L4A9Z1Z3 1794 aa24.34■■□□□ 1.49
RAB40B-203ENST00000570676 ATP10AO60312 1499 aa24.32■■□□□ 1.48
RAB40B-203ENST00000570676 EHBP1L1Q8N3D4 1523 aa24.32■■□□□ 1.48
RAB40B-203ENST00000570676 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
RAB40B-203ENST00000570676 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
RAB40B-203ENST00000570676 TRAPPC8Q9Y2L5 1435 aa24.3■■□□□ 1.48
RAB40B-203ENST00000570676 MLH3Q9UHC1 1453 aa24.29■■□□□ 1.48
RAB40B-203ENST00000570676 TIAM1Q13009 1591 aa24.29■■□□□ 1.48
RAB40B-203ENST00000570676 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
RAB40B-203ENST00000570676 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
RAB40B-203ENST00000570676 AFAP1Q8N556 730 aa24.27■■□□□ 1.48
RAB40B-203ENST00000570676 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
RAB40B-203ENST00000570676 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
RAB40B-203ENST00000570676 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.46
RAB40B-203ENST00000570676 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
RAB40B-203ENST00000570676 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
RAB40B-203ENST00000570676 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
RAB40B-203ENST00000570676 AGLP35573 1532 aa24.18■■□□□ 1.46
RAB40B-203ENST00000570676 LMTK3Q96Q04 1460 aa24.18■■□□□ 1.46
RAB40B-203ENST00000570676 PLEKHH2Q8IVE3 1493 aa24.17■■□□□ 1.46
RAB40B-203ENST00000570676 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
RAB40B-203ENST00000570676 MLECQ14165 292 aa24.15■■□□□ 1.46
RAB40B-203ENST00000570676 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
RAB40B-203ENST00000570676 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
RAB40B-203ENST00000570676 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
RAB40B-203ENST00000570676 CFDP1Q9UEE9 299 aaPredicted RBP24.12■■□□□ 1.45
RAB40B-203ENST00000570676 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
RAB40B-203ENST00000570676 PLXNC1O60486 1568 aa24.1■■□□□ 1.45
RAB40B-203ENST00000570676 HNRNPMP52272 730 aaKnown RBP eCLIP24.08■■□□□ 1.45
RAB40B-203ENST00000570676 PREX1Q8TCU6 1659 aa24.08■■□□□ 1.44
RAB40B-203ENST00000570676 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
RAB40B-203ENST00000570676 C3P01024 1663 aa24.07■■□□□ 1.44
RAB40B-203ENST00000570676 ADGBQ8N7X0 1667 aa24.06■■□□□ 1.44
RAB40B-203ENST00000570676 LRRC9Q6ZRR7 1453 aa24.06■■□□□ 1.44
RAB40B-203ENST00000570676 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
RAB40B-203ENST00000570676 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
RAB40B-203ENST00000570676 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
RAB40B-203ENST00000570676 ZNF644Q9H582 1327 aaPredicted RBP24.04■■□□□ 1.44
RAB40B-203ENST00000570676 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
RAB40B-203ENST00000570676 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
RAB40B-203ENST00000570676 A2MP01023 1474 aa23.99■■□□□ 1.43
RAB40B-203ENST00000570676 ARHGEF5Q12774 1597 aa23.97■■□□□ 1.43
RAB40B-203ENST00000570676 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
RAB40B-203ENST00000570676 RTEL1-TNFRSF6BF6WH68 1400 aa23.95■■□□□ 1.42
RAB40B-203ENST00000570676 CEBPAP49715 358 aaPredicted RBP23.95■■□□□ 1.42
RAB40B-203ENST00000570676 CNTLNQ9NXG0 1405 aa23.94■■□□□ 1.42
RAB40B-203ENST00000570676 CLTCQ00610 1675 aaKnown RBP23.94■■□□□ 1.42
RAB40B-203ENST00000570676 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
RAB40B-203ENST00000570676 HSPA2P54652 639 aa23.92■■□□□ 1.42
RAB40B-203ENST00000570676 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-203ENST00000570676 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
RAB40B-203ENST00000570676 MYOM3Q5VTT5 1437 aa23.87■■□□□ 1.41
RAB40B-203ENST00000570676 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
RAB40B-203ENST00000570676 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
RAB40B-203ENST00000570676 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
RAB40B-203ENST00000570676 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
RAB40B-203ENST00000570676 DHX29Q7Z478 1369 aaKnown RBP23.82■■□□□ 1.4
RAB40B-203ENST00000570676 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-203ENST00000570676 NPATQ14207 1427 aa23.82■■□□□ 1.4
RAB40B-203ENST00000570676 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
RAB40B-203ENST00000570676 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
RAB40B-203ENST00000570676 ZNF142P52746 1687 aaPredicted RBP23.8■■□□□ 1.4
RAB40B-203ENST00000570676 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
RAB40B-203ENST00000570676 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
RAB40B-203ENST00000570676 FAM135AQ9P2D6 1515 aa23.79■■□□□ 1.4
RAB40B-203ENST00000570676 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
RAB40B-203ENST00000570676 RNF17Q9BXT8 1623 aaKnown RBP23.76■■□□□ 1.39
RAB40B-203ENST00000570676 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
RAB40B-203ENST00000570676 EIF2AK4Q9P2K8 1649 aaKnown RBP23.75■■□□□ 1.39
RAB40B-203ENST00000570676 GGT6Q6P531 493 aa23.75■■□□□ 1.39
RAB40B-203ENST00000570676 PTPRKQ15262 1439 aa23.75■■□□□ 1.39
RAB40B-203ENST00000570676 DNMT1P26358 1616 aaKnown RBP23.71■■□□□ 1.39
RAB40B-203ENST00000570676 CEP170BQ9Y4F5 1589 aaPredicted RBP23.71■■□□□ 1.39
RAB40B-203ENST00000570676 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
RAB40B-203ENST00000570676 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms