RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SEC24BO95487 1268 aa11.72□□□□□ -0.53
SHCBP1-206ENST00000567698 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
SHCBP1-206ENST00000567698 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
SHCBP1-206ENST00000567698 KIF3CO14782 793 aa11.71□□□□□ -0.53
SHCBP1-206ENST00000567698 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
SHCBP1-206ENST00000567698 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
SHCBP1-206ENST00000567698 CAMK2BQ13554 666 aa11.67□□□□□ -0.54
SHCBP1-206ENST00000567698 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
SHCBP1-206ENST00000567698 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
SHCBP1-206ENST00000567698 E2F4Q16254 413 aa11.66□□□□□ -0.54
SHCBP1-206ENST00000567698 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
SHCBP1-206ENST00000567698 DSG2Q14126 1118 aa11.65□□□□□ -0.54
SHCBP1-206ENST00000567698 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
SHCBP1-206ENST00000567698 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
SHCBP1-206ENST00000567698 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
SHCBP1-206ENST00000567698 FOXK1P85037 733 aa11.62□□□□□ -0.55
SHCBP1-206ENST00000567698 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
SHCBP1-206ENST00000567698 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
SHCBP1-206ENST00000567698 G3V3G9 751 aa11.59□□□□□ -0.55
SHCBP1-206ENST00000567698 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
SHCBP1-206ENST00000567698 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
SHCBP1-206ENST00000567698 NBR1Q14596 966 aa11.56□□□□□ -0.56
SHCBP1-206ENST00000567698 PLPP6Q8IY26 295 aa11.56□□□□□ -0.56
SHCBP1-206ENST00000567698 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
SHCBP1-206ENST00000567698 SEMA3EO15041 775 aa11.47□□□□□ -0.57
SHCBP1-206ENST00000567698 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.47□□□□□ -0.57
SHCBP1-206ENST00000567698 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
SHCBP1-206ENST00000567698 DPYSL4O14531 572 aa11.46□□□□□ -0.57
SHCBP1-206ENST00000567698 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
SHCBP1-206ENST00000567698 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
SHCBP1-206ENST00000567698 PDIA6Q15084 440 aa11.43□□□□□ -0.58
SHCBP1-206ENST00000567698 SLC34A2O95436 690 aa11.41□□□□□ -0.58
SHCBP1-206ENST00000567698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHCBP1-206ENST00000567698 PTCD2Q8WV60 388 aaKnown RBP11.4□□□□□ -0.58
SHCBP1-206ENST00000567698 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
SHCBP1-206ENST00000567698 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHCBP1-206ENST00000567698 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
SHCBP1-206ENST00000567698 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
SHCBP1-206ENST00000567698 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
SHCBP1-206ENST00000567698 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
SHCBP1-206ENST00000567698 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SHCBP1-206ENST00000567698 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
SHCBP1-206ENST00000567698 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
SHCBP1-206ENST00000567698 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
SHCBP1-206ENST00000567698 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
SHCBP1-206ENST00000567698 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
SHCBP1-206ENST00000567698 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
SHCBP1-206ENST00000567698 PTGER2P43116 358 aa11.29□□□□□ -0.6
SHCBP1-206ENST00000567698 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
SHCBP1-206ENST00000567698 EVI5O60447 810 aa11.28□□□□□ -0.6
SHCBP1-206ENST00000567698 LHX8Q68G74 356 aa11.27□□□□□ -0.61
SHCBP1-206ENST00000567698 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-206ENST00000567698 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-206ENST00000567698 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
SHCBP1-206ENST00000567698 TBC1D12O60347 775 aa11.23□□□□□ -0.61
SHCBP1-206ENST00000567698 OSBPP22059 807 aa11.23□□□□□ -0.61
SHCBP1-206ENST00000567698 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■□□□□ 8.4
SHCBP1-206ENST00000567698 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
SHCBP1-206ENST00000567698 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
SHCBP1-206ENST00000567698 ZC3H15Q8WU90 426 aaKnown RBP11.21□□□□□ -0.61
SHCBP1-206ENST00000567698 DDX12PQ92771 950 aa11.21□□□□□ -0.61
SHCBP1-206ENST00000567698 GPR37O15354 613 aa11.2□□□□□ -0.62
SHCBP1-206ENST00000567698 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
SHCBP1-206ENST00000567698 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
SHCBP1-206ENST00000567698 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
SHCBP1-206ENST00000567698 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
SHCBP1-206ENST00000567698 NUDT7P0C024 238 aa11.16□□□□□ -0.62
SHCBP1-206ENST00000567698 PCDHGA10Q9Y5H3 936 aa11.15□□□□□ -0.62
SHCBP1-206ENST00000567698 ZMYND10O75800 440 aa11.13□□□□□ -0.63
SHCBP1-206ENST00000567698 PHF14O94880 888 aa11.13□□□□□ -0.63
SHCBP1-206ENST00000567698 FOSBP53539 338 aa11.12□□□□□ -0.63
SHCBP1-206ENST00000567698 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-206ENST00000567698 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
SHCBP1-206ENST00000567698 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
SHCBP1-206ENST00000567698 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
SHCBP1-206ENST00000567698 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
SHCBP1-206ENST00000567698 SNPHO15079 494 aa11.1□□□□□ -0.63
SHCBP1-206ENST00000567698 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
SHCBP1-206ENST00000567698 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
SHCBP1-206ENST00000567698 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
SHCBP1-206ENST00000567698 EPAS1Q99814 870 aa11.09□□□□□ -0.63
SHCBP1-206ENST00000567698 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
SHCBP1-206ENST00000567698 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
SHCBP1-206ENST00000567698 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
SHCBP1-206ENST00000567698 NPDC1Q9NQX5 325 aaPredicted RBP11.06□□□□□ -0.64
SHCBP1-206ENST00000567698 PTGDRQ13258 359 aa11.04□□□□□ -0.64
SHCBP1-206ENST00000567698 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
SHCBP1-206ENST00000567698 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
SHCBP1-206ENST00000567698 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
SHCBP1-206ENST00000567698 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
SHCBP1-206ENST00000567698 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-206ENST00000567698 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
SHCBP1-206ENST00000567698 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
SHCBP1-206ENST00000567698 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
SHCBP1-206ENST00000567698 ST18O60284 1047 aa11.01□□□□□ -0.65
SHCBP1-206ENST00000567698 FECHP22830 423 aa11.01□□□□□ -0.65
SHCBP1-206ENST00000567698 ZDHHC16Q969W1 377 aa11.01□□□□□ -0.65
SHCBP1-206ENST00000567698 MAP3K7O43318 606 aa10.99□□□□□ -0.65
SHCBP1-206ENST00000567698 FCHSD2O94868 740 aa10.98□□□□□ -0.65
SHCBP1-206ENST00000567698 HIC1Q14526 733 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 695.5 ms