RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
KARS-205ENST00000565738 SEC24BO95487 1268 aa14.01□□□□□ -0.17
KARS-205ENST00000565738 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
KARS-205ENST00000565738 GPHNQ9NQX3 736 aaPredicted RBP14.01□□□□□ -0.17
KARS-205ENST00000565738 TMC2Q8TDI7 906 aa14□□□□□ -0.17
KARS-205ENST00000565738 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
KARS-205ENST00000565738 SEMA3EO15041 775 aa13.97□□□□□ -0.17
KARS-205ENST00000565738 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
KARS-205ENST00000565738 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
KARS-205ENST00000565738 DSG2Q14126 1118 aa13.95□□□□□ -0.18
KARS-205ENST00000565738 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
KARS-205ENST00000565738 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
KARS-205ENST00000565738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
KARS-205ENST00000565738 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
KARS-205ENST00000565738 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
KARS-205ENST00000565738 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
KARS-205ENST00000565738 C2orf72A6NCS6 295 aa13.9□□□□□ -0.18
KARS-205ENST00000565738 FOXK1P85037 733 aa13.88□□□□□ -0.19
KARS-205ENST00000565738 ARIH1Q9Y4X5 557 aaPredicted RBP13.88□□□□□ -0.19
KARS-205ENST00000565738 C7P10643 843 aa13.87□□□□□ -0.19
KARS-205ENST00000565738 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
KARS-205ENST00000565738 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
KARS-205ENST00000565738 DPYSL4O14531 572 aa13.86□□□□□ -0.19
KARS-205ENST00000565738 EMILIN3Q9NT22 766 aa13.86□□□□□ -0.19
KARS-205ENST00000565738 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
KARS-205ENST00000565738 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
KARS-205ENST00000565738 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
KARS-205ENST00000565738 KIF3CO14782 793 aa13.83□□□□□ -0.2
KARS-205ENST00000565738 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
KARS-205ENST00000565738 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
KARS-205ENST00000565738 C3orf67Q6ZVT6 689 aa13.78□□□□□ -0.2
KARS-205ENST00000565738 MLLT3P42568 568 aaPredicted RBP13.77□□□□□ -0.21
KARS-205ENST00000565738 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
KARS-205ENST00000565738 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
KARS-205ENST00000565738 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
KARS-205ENST00000565738 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
KARS-205ENST00000565738 PDIA6Q15084 440 aa13.73□□□□□ -0.21
KARS-205ENST00000565738 RBM26Q5T8P6 1007 aaKnown RBP13.69□□□□□ -0.22
KARS-205ENST00000565738 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
KARS-205ENST00000565738 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
KARS-205ENST00000565738 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
KARS-205ENST00000565738 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
KARS-205ENST00000565738 SLC24A3Q9HC58 644 aa13.6□□□□□ -0.23
KARS-205ENST00000565738 TBC1D12O60347 775 aa13.59□□□□□ -0.23
KARS-205ENST00000565738 ZMYND10O75800 440 aa13.58□□□□□ -0.24
KARS-205ENST00000565738 EVI5O60447 810 aa13.57□□□□□ -0.24
KARS-205ENST00000565738 DDX12PQ92771 950 aa13.57□□□□□ -0.24
KARS-205ENST00000565738 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
KARS-205ENST00000565738 PTCD2Q8WV60 388 aaKnown RBP13.53□□□□□ -0.24
KARS-205ENST00000565738 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
KARS-205ENST00000565738 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
KARS-205ENST00000565738 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
KARS-205ENST00000565738 SLC34A2O95436 690 aa13.49□□□□□ -0.25
KARS-205ENST00000565738 OSBPP22059 807 aa13.49□□□□□ -0.25
KARS-205ENST00000565738 PTGER2P43116 358 aa13.48□□□□□ -0.25
KARS-205ENST00000565738 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
KARS-205ENST00000565738 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
KARS-205ENST00000565738 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
KARS-205ENST00000565738 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
KARS-205ENST00000565738 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
KARS-205ENST00000565738 GPR37O15354 613 aa13.43□□□□□ -0.26
KARS-205ENST00000565738 SLAIN1Q8ND83 568 aa13.42□□□□□ -0.26
KARS-205ENST00000565738 AK7Q96M32 723 aa13.42□□□□□ -0.26
KARS-205ENST00000565738 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
KARS-205ENST00000565738 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
KARS-205ENST00000565738 SCUBE2Q9NQ36 999 aa13.39□□□□□ -0.27
KARS-205ENST00000565738 FCHSD2O94868 740 aa13.37□□□□□ -0.27
KARS-205ENST00000565738 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
KARS-205ENST00000565738 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
KARS-205ENST00000565738 PHF14O94880 888 aa13.35□□□□□ -0.27
KARS-205ENST00000565738 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
KARS-205ENST00000565738 MAP3K7O43318 606 aa13.34□□□□□ -0.27
KARS-205ENST00000565738 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
KARS-205ENST00000565738 EPAS1Q99814 870 aa13.34□□□□□ -0.27
KARS-205ENST00000565738 GNPATO15228 680 aa13.33□□□□□ -0.28
KARS-205ENST00000565738 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
KARS-205ENST00000565738 NUDT7P0C024 238 aa13.32□□□□□ -0.28
KARS-205ENST00000565738 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
KARS-205ENST00000565738 HIC1Q14526 733 aa13.32□□□□□ -0.28
KARS-205ENST00000565738 ARSIQ5FYB1 569 aa13.32□□□□□ -0.28
KARS-205ENST00000565738 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
KARS-205ENST00000565738 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
KARS-205ENST00000565738 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
KARS-205ENST00000565738 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
KARS-205ENST00000565738 FECHP22830 423 aa13.31□□□□□ -0.28
KARS-205ENST00000565738 TRIM66O15016 1216 aa13.3□□□□□ -0.28
KARS-205ENST00000565738 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
KARS-205ENST00000565738 PTGDRQ13258 359 aa13.3□□□□□ -0.28
KARS-205ENST00000565738 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
KARS-205ENST00000565738 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
KARS-205ENST00000565738 CCDC102AQ96A19 550 aa13.29□□□□□ -0.28
KARS-205ENST00000565738 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
KARS-205ENST00000565738 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
KARS-205ENST00000565738 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
KARS-205ENST00000565738 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
KARS-205ENST00000565738 PDE4DQ08499 809 aa13.27□□□□□ -0.29
KARS-205ENST00000565738 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
KARS-205ENST00000565738 ZNF454Q8N9F8 522 aa13.27□□□□□ -0.29
KARS-205ENST00000565738 IRF6O14896 467 aa13.26□□□□□ -0.29
KARS-205ENST00000565738 FOSBP53539 338 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms