RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
CDH1-207ENST00000564745 SEMA3EO15041 775 aa10.71□□□□□ -0.69
CDH1-207ENST00000564745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDH1-207ENST00000564745 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
CDH1-207ENST00000564745 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
CDH1-207ENST00000564745 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
CDH1-207ENST00000564745 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
CDH1-207ENST00000564745 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
CDH1-207ENST00000564745 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
CDH1-207ENST00000564745 IER5LQ5T953 404 aa10.67□□□□□ -0.7
CDH1-207ENST00000564745 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
CDH1-207ENST00000564745 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
CDH1-207ENST00000564745 DSG2Q14126 1118 aa10.66□□□□□ -0.7
CDH1-207ENST00000564745 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
CDH1-207ENST00000564745 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
CDH1-207ENST00000564745 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
CDH1-207ENST00000564745 COLQQ9Y215 455 aaPredicted RBP10.64□□□□□ -0.71
CDH1-207ENST00000564745 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
CDH1-207ENST00000564745 PLCG2P16885 1265 aa10.62□□□□□ -0.71
CDH1-207ENST00000564745 EMILIN3Q9NT22 766 aa10.62□□□□□ -0.71
CDH1-207ENST00000564745 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
CDH1-207ENST00000564745 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
CDH1-207ENST00000564745 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
CDH1-207ENST00000564745 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
CDH1-207ENST00000564745 POTEFA5A3E0 1075 aa10.59□□□□□ -0.71
CDH1-207ENST00000564745 C7P10643 843 aa10.59□□□□□ -0.71
CDH1-207ENST00000564745 FOXK1P85037 733 aa10.58□□□□□ -0.72
CDH1-207ENST00000564745 TMEM92Q6UXU6 159 aa10.58□□□□□ -0.72
CDH1-207ENST00000564745 DPYSL4O14531 572 aa10.57□□□□□ -0.72
CDH1-207ENST00000564745 KIF3CO14782 793 aa10.57□□□□□ -0.72
CDH1-207ENST00000564745 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
CDH1-207ENST00000564745 G3V3G9 751 aa10.56□□□□□ -0.72
CDH1-207ENST00000564745 SEC24BO95487 1268 aa10.56□□□□□ -0.72
CDH1-207ENST00000564745 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
CDH1-207ENST00000564745 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
CDH1-207ENST00000564745 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
CDH1-207ENST00000564745 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
CDH1-207ENST00000564745 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
CDH1-207ENST00000564745 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
CDH1-207ENST00000564745 PDIA6Q15084 440 aa10.48□□□□□ -0.73
CDH1-207ENST00000564745 SMYD5Q6GMV2 418 aa10.48□□□□□ -0.73
CDH1-207ENST00000564745 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDH1-207ENST00000564745 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
CDH1-207ENST00000564745 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
CDH1-207ENST00000564745 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
CDH1-207ENST00000564745 ZMYND10O75800 440 aa10.42□□□□□ -0.74
CDH1-207ENST00000564745 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
CDH1-207ENST00000564745 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
CDH1-207ENST00000564745 OXER1Q8TDS5 423 aa10.41□□□□□ -0.74
CDH1-207ENST00000564745 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
CDH1-207ENST00000564745 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
CDH1-207ENST00000564745 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
CDH1-207ENST00000564745 GPIHBP1Q8IV16 184 aa10.39□□□□□ -0.75
CDH1-207ENST00000564745 BRPF1P55201 1214 aaPredicted RBP10.37□□□□□ -0.75
CDH1-207ENST00000564745 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
CDH1-207ENST00000564745 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
CDH1-207ENST00000564745 DDX12PQ92771 950 aa10.34□□□□□ -0.75
CDH1-207ENST00000564745 GPR37O15354 613 aa10.33□□□□□ -0.76
CDH1-207ENST00000564745 EVI5O60447 810 aa10.32□□□□□ -0.76
CDH1-207ENST00000564745 OSBPP22059 807 aa10.32□□□□□ -0.76
CDH1-207ENST00000564745 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
CDH1-207ENST00000564745 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
CDH1-207ENST00000564745 PTGER2P43116 358 aa10.3□□□□□ -0.76
CDH1-207ENST00000564745 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
CDH1-207ENST00000564745 TBC1D12O60347 775 aa10.29□□□□□ -0.76
CDH1-207ENST00000564745 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
CDH1-207ENST00000564745 NUTM2FA1L443 756 aa10.28□□□□□ -0.76
CDH1-207ENST00000564745 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
CDH1-207ENST00000564745 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
CDH1-207ENST00000564745 SLC34A2O95436 690 aa10.27□□□□□ -0.77
CDH1-207ENST00000564745 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
CDH1-207ENST00000564745 AK7Q96M32 723 aa10.25□□□□□ -0.77
CDH1-207ENST00000564745 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
CDH1-207ENST00000564745 PCDHGA4Q9Y5G9 962 aa10.23□□□□□ -0.77
CDH1-207ENST00000564745 FECHP22830 423 aa10.22□□□□□ -0.77
CDH1-207ENST00000564745 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
CDH1-207ENST00000564745 TRIM66O15016 1216 aa10.2□□□□□ -0.78
CDH1-207ENST00000564745 GTF3C3Q9Y5Q9 886 aa10.19□□□□□ -0.78
CDH1-207ENST00000564745 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
CDH1-207ENST00000564745 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
CDH1-207ENST00000564745 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH1-207ENST00000564745 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
CDH1-207ENST00000564745 FCHSD2O94868 740 aa10.17□□□□□ -0.78
CDH1-207ENST00000564745 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
CDH1-207ENST00000564745 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
CDH1-207ENST00000564745 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
CDH1-207ENST00000564745 GNPATO15228 680 aa10.16□□□□□ -0.78
CDH1-207ENST00000564745 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
CDH1-207ENST00000564745 PDE4DQ08499 809 aa10.16□□□□□ -0.78
CDH1-207ENST00000564745 PTGDRQ13258 359 aa10.16□□□□□ -0.78
CDH1-207ENST00000564745 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
CDH1-207ENST00000564745 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
CDH1-207ENST00000564745 PHF14O94880 888 aa10.15□□□□□ -0.78
CDH1-207ENST00000564745 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
CDH1-207ENST00000564745 MAP2K5Q13163 448 aa10.15□□□□□ -0.78
CDH1-207ENST00000564745 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
CDH1-207ENST00000564745 IRF6O14896 467 aa10.14□□□□□ -0.79
CDH1-207ENST00000564745 HIC1Q14526 733 aa10.14□□□□□ -0.79
CDH1-207ENST00000564745 NPDC1Q9NQX5 325 aaPredicted RBP10.14□□□□□ -0.79
CDH1-207ENST00000564745 MAP3K7O43318 606 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms