RNA–Protein interactions for RNA: ENST00000563724.1

LINC02516-201, Transcript of long intergenic non-protein coding RNA 2516, humanhuman

TSL 2 BASIC

Gene LINC02516, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02516-201ENST00000563724 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
LINC02516-201ENST00000563724 PPP1R37O75864 691 aa7.94□□□□□ -1.14
LINC02516-201ENST00000563724 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
LINC02516-201ENST00000563724 BRPF1P55201 1214 aaPredicted RBP7.94□□□□□ -1.14
LINC02516-201ENST00000563724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC02516-201ENST00000563724 COLQQ9Y215 455 aaPredicted RBP7.94□□□□□ -1.14
LINC02516-201ENST00000563724 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
LINC02516-201ENST00000563724 POTEFA5A3E0 1075 aa7.9□□□□□ -1.14
LINC02516-201ENST00000563724 WDR70Q9NW82 654 aa7.89□□□□□ -1.15
LINC02516-201ENST00000563724 G3V3G9 751 aa7.89□□□□□ -1.15
LINC02516-201ENST00000563724 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
LINC02516-201ENST00000563724 PODXL2Q9NZ53 605 aa7.88□□□□□ -1.15
LINC02516-201ENST00000563724 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
LINC02516-201ENST00000563724 NEUROD2Q15784 382 aa7.87□□□□□ -1.15
LINC02516-201ENST00000563724 MICALL2Q8IY33 904 aa7.87□□□□□ -1.15
LINC02516-201ENST00000563724 KCNV2Q8TDN2 545 aa7.87□□□□□ -1.15
LINC02516-201ENST00000563724 L3MBTL3Q96JM7 780 aaPredicted RBP7.87□□□□□ -1.15
LINC02516-201ENST00000563724 CADPS2Q86UW7 1296 aa7.85□□□□□ -1.15
LINC02516-201ENST00000563724 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
LINC02516-201ENST00000563724 C3orf67Q6ZVT6 689 aa7.82□□□□□ -1.16
LINC02516-201ENST00000563724 ZC3H15Q8WU90 426 aaKnown RBP7.81□□□□□ -1.16
LINC02516-201ENST00000563724 NCKAP5LQ9HCH0 1330 aa7.8□□□□□ -1.16
LINC02516-201ENST00000563724 POTEB2H3BUK9 544 aa7.78□□□□□ -1.16
LINC02516-201ENST00000563724 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
LINC02516-201ENST00000563724 TMC2Q8TDI7 906 aa7.77□□□□□ -1.17
LINC02516-201ENST00000563724 CRISPLD2Q9H0B8 497 aa7.77□□□□□ -1.17
LINC02516-201ENST00000563724 PDE4AP27815 886 aa7.76□□□□□ -1.17
LINC02516-201ENST00000563724 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
LINC02516-201ENST00000563724 POTEJP0CG39 1038 aa7.75□□□□□ -1.17
LINC02516-201ENST00000563724 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
LINC02516-201ENST00000563724 GPHNQ9NQX3 736 aaPredicted RBP7.75□□□□□ -1.17
LINC02516-201ENST00000563724 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.75□□□□□ -1.17
LINC02516-201ENST00000563724 ARHGEF1Q92888 912 aaKnown RBP7.74□□□□□ -1.17
LINC02516-201ENST00000563724 DDX27Q96GQ7 796 aaKnown RBP7.74□□□□□ -1.17
LINC02516-201ENST00000563724 C2orf72A6NCS6 295 aa7.74□□□□□ -1.17
LINC02516-201ENST00000563724 SCUBE2Q9NQ36 999 aa7.74□□□□□ -1.17
LINC02516-201ENST00000563724 TMEM92Q6UXU6 159 aa7.73□□□□□ -1.17
LINC02516-201ENST00000563724 KIF3CO14782 793 aa7.72□□□□□ -1.17
LINC02516-201ENST00000563724 MFSD10Q14728 455 aa7.72□□□□□ -1.17
LINC02516-201ENST00000563724 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
LINC02516-201ENST00000563724 PPP1R15BQ5SWA1 713 aa7.71□□□□□ -1.17
LINC02516-201ENST00000563724 DSG2Q14126 1118 aa7.71□□□□□ -1.18
LINC02516-201ENST00000563724 FOXK1P85037 733 aa7.7□□□□□ -1.18
LINC02516-201ENST00000563724 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
LINC02516-201ENST00000563724 ZMYND15Q9H091 742 aa7.69□□□□□ -1.18
LINC02516-201ENST00000563724 TESPA1A2RU30 521 aaPredicted RBP7.69□□□□□ -1.18
LINC02516-201ENST00000563724 SEMA3EO15041 775 aa7.69□□□□□ -1.18
LINC02516-201ENST00000563724 LHX8Q68G74 356 aa7.69□□□□□ -1.18
LINC02516-201ENST00000563724 ZMYND10O75800 440 aa7.68□□□□□ -1.18
LINC02516-201ENST00000563724 E2F4Q16254 413 aa7.68□□□□□ -1.18
LINC02516-201ENST00000563724 SLAIN1Q8ND83 568 aa7.68□□□□□ -1.18
LINC02516-201ENST00000563724 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
LINC02516-201ENST00000563724 RSPH6AQ9H0K4 717 aa7.67□□□□□ -1.18
LINC02516-201ENST00000563724 SMYD5Q6GMV2 418 aa7.65□□□□□ -1.18
LINC02516-201ENST00000563724 OTUD5Q96G74 571 aa7.65□□□□□ -1.18
LINC02516-201ENST00000563724 CAMK2BQ13554 666 aa7.64□□□□□ -1.19
LINC02516-201ENST00000563724 NPM2Q86SE8 214 aaKnown RBP7.64□□□□□ -1.19
LINC02516-201ENST00000563724 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
LINC02516-201ENST00000563724 HRCP23327 699 aa7.61□□□□□ -1.19
LINC02516-201ENST00000563724 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
LINC02516-201ENST00000563724 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
LINC02516-201ENST00000563724 UPF1Q92900 1129 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC02516-201ENST00000563724 AK7Q96M32 723 aa7.59□□□□□ -1.19
LINC02516-201ENST00000563724 ARID3AQ99856 593 aa7.59□□□□□ -1.19
LINC02516-201ENST00000563724 GPBP1L1Q9HC44 474 aaPredicted RBP7.59□□□□□ -1.19
LINC02516-201ENST00000563724 DPYSL4O14531 572 aa7.58□□□□□ -1.2
LINC02516-201ENST00000563724 SLC34A2O95436 690 aa7.57□□□□□ -1.2
LINC02516-201ENST00000563724 DOK7Q18PE1 504 aa7.57□□□□□ -1.2
LINC02516-201ENST00000563724 OXER1Q8TDS5 423 aa7.56□□□□□ -1.2
LINC02516-201ENST00000563724 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
LINC02516-201ENST00000563724 RIMBP2O15034 1052 aa7.56□□□□□ -1.2
LINC02516-201ENST00000563724 HOXB3P14651 431 aaPredicted RBP7.56□□□□□ -1.2
LINC02516-201ENST00000563724 KRI1Q8N9T8 703 aaKnown RBP7.56□□□□□ -1.2
LINC02516-201ENST00000563724 SNPHO15079 494 aa7.55□□□□□ -1.2
LINC02516-201ENST00000563724 MAP3K9P80192 1104 aa7.55□□□□□ -1.2
LINC02516-201ENST00000563724 PTCD2Q8WV60 388 aaKnown RBP7.55□□□□□ -1.2
LINC02516-201ENST00000563724 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
LINC02516-201ENST00000563724 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
LINC02516-201ENST00000563724 TBC1D12O60347 775 aa7.54□□□□□ -1.2
LINC02516-201ENST00000563724 PDIA6Q15084 440 aa7.53□□□□□ -1.2
LINC02516-201ENST00000563724 PCDHGA4Q9Y5G9 962 aa7.53□□□□□ -1.2
LINC02516-201ENST00000563724 ZNF316A6NFI3 1004 aaPredicted RBP7.52□□□□□ -1.21
LINC02516-201ENST00000563724 GPIHBP1Q8IV16 184 aa7.51□□□□□ -1.21
LINC02516-201ENST00000563724 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
LINC02516-201ENST00000563724 C1orf115Q9H7X2 142 aa7.51□□□□□ -1.21
LINC02516-201ENST00000563724 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
LINC02516-201ENST00000563724 SPDYE16A6NNV3 312 aaPredicted RBP7.5□□□□□ -1.21
LINC02516-201ENST00000563724 EVI5O60447 810 aa7.5□□□□□ -1.21
LINC02516-201ENST00000563724 ARSIQ5FYB1 569 aa7.49□□□□□ -1.21
LINC02516-201ENST00000563724 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
LINC02516-201ENST00000563724 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
LINC02516-201ENST00000563724 APBB1O00213 710 aa7.48□□□□□ -1.21
LINC02516-201ENST00000563724 NUDT7P0C024 238 aa7.48□□□□□ -1.21
LINC02516-201ENST00000563724 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
LINC02516-201ENST00000563724 PDE4DQ08499 809 aa7.48□□□□□ -1.21
LINC02516-201ENST00000563724 RBM26Q5T8P6 1007 aaKnown RBP7.48□□□□□ -1.21
LINC02516-201ENST00000563724 TRIM66O15016 1216 aa7.47□□□□□ -1.21
LINC02516-201ENST00000563724 KHSRPQ92945 711 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC02516-201ENST00000563724 ARID3CA6NKF2 412 aa7.46□□□□□ -1.21
LINC02516-201ENST00000563724 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms