RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 AKT1S1Q96B36 256 aa6.83□□□□□ -1.32
SMG1-207ENST00000563235 KCNV2Q8TDN2 545 aa6.83□□□□□ -1.32
SMG1-207ENST00000563235 CADPSQ9ULU8 1353 aa6.82□□□□□ -1.32
SMG1-207ENST00000563235 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
SMG1-207ENST00000563235 CLUAP1Q96AJ1 413 aa6.82□□□□□ -1.32
SMG1-207ENST00000563235 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
SMG1-207ENST00000563235 SPDYE4A6NLX3 237 aa6.81□□□□□ -1.32
SMG1-207ENST00000563235 TEX2Q8IWB9 1127 aa6.81□□□□□ -1.32
SMG1-207ENST00000563235 CECR2Q9BXF3 1484 aa6.8□□□□□ -1.32
SMG1-207ENST00000563235 FBXW7Q969H0 707 aa6.8□□□□□ -1.32
SMG1-207ENST00000563235 NACADO15069 1562 aa6.79□□□□□ -1.32
SMG1-207ENST00000563235 GTPBP6O43824 516 aaPredicted RBP6.79□□□□□ -1.32
SMG1-207ENST00000563235 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
SMG1-207ENST00000563235 SMARCA5O60264 1052 aaPredicted RBP6.79□□□□□ -1.32
SMG1-207ENST00000563235 UNC13AQ9UPW8 1703 aa6.79□□□□□ -1.32
SMG1-207ENST00000563235 CNPY4Q8N129 248 aa6.78□□□□□ -1.32
SMG1-207ENST00000563235 SPOCK2Q92563 424 aa6.78□□□□□ -1.32
SMG1-207ENST00000563235 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
SMG1-207ENST00000563235 UNCXA6NJT0 531 aa6.77□□□□□ -1.33
SMG1-207ENST00000563235 TRAK2O60296 914 aa6.77□□□□□ -1.33
SMG1-207ENST00000563235 CC2D2AQ9P2K1 1620 aa6.76□□□□□ -1.33
SMG1-207ENST00000563235 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
SMG1-207ENST00000563235 P3H3Q8IVL6 736 aa6.74□□□□□ -1.33
SMG1-207ENST00000563235 PLCD4Q9BRC7 762 aa6.74□□□□□ -1.33
SMG1-207ENST00000563235 BRD1O95696 1058 aa6.74□□□□□ -1.33
SMG1-207ENST00000563235 LOC102724159A0A0B4J2E5 919 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 PWP2Q15269 919 aaKnown RBP6.73□□□□□ -1.33
SMG1-207ENST00000563235 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 ZMYND10O75800 440 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 TRIM41Q8WV44 630 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 KDM4CQ9H3R0 1056 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
SMG1-207ENST00000563235 ZNF777Q9ULD5 760 aaPredicted RBP6.73□□□□□ -1.33
SMG1-207ENST00000563235 ONECUT3O60422 494 aaPredicted RBP6.71□□□□□ -1.33
SMG1-207ENST00000563235 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
SMG1-207ENST00000563235 REM2Q8IYK8 340 aaPredicted RBP6.71□□□□□ -1.34
SMG1-207ENST00000563235 ANAPC15P60006 121 aa6.7□□□□□ -1.34
SMG1-207ENST00000563235 FAM43BQ6ZT52 329 aaPredicted RBP6.7□□□□□ -1.34
SMG1-207ENST00000563235 RIPOR2Q9Y4F9 1068 aa6.7□□□□□ -1.34
SMG1-207ENST00000563235 NOL8Q76FK4 1167 aaKnown RBP6.68□□□□□ -1.34
SMG1-207ENST00000563235 SPATA32Q96LK8 384 aa6.68□□□□□ -1.34
SMG1-207ENST00000563235 FAM117AQ9C073 453 aa6.68□□□□□ -1.34
SMG1-207ENST00000563235 CENPBP07199 599 aaPredicted RBP6.67□□□□□ -1.34
SMG1-207ENST00000563235 SP7Q8TDD2 431 aaPredicted RBP6.67□□□□□ -1.34
SMG1-207ENST00000563235 EXOC8Q8IYI6 725 aa6.67□□□□□ -1.34
SMG1-207ENST00000563235 MAFGO15525 162 aa6.66□□□□□ -1.34
SMG1-207ENST00000563235 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
SMG1-207ENST00000563235 RNF25Q96BH1 459 aaPredicted RBP6.66□□□□□ -1.34
SMG1-207ENST00000563235 ARIH1Q9Y4X5 557 aaPredicted RBP6.66□□□□□ -1.34
SMG1-207ENST00000563235 A6NJR5 290 aa6.66□□□□□ -1.34
SMG1-207ENST00000563235 FAM50AQ14320 339 aaKnown RBP6.66□□□□□ -1.34
SMG1-207ENST00000563235 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
SMG1-207ENST00000563235 PIP4P2Q8N4L2 257 aa6.66□□□□□ -1.34
SMG1-207ENST00000563235 SGSM3Q96HU1 749 aa6.66□□□□□ -1.34
SMG1-207ENST00000563235 SEMA3EO15041 775 aa6.65□□□□□ -1.34
SMG1-207ENST00000563235 OSCARQ8IYS5 282 aa6.65□□□□□ -1.34
SMG1-207ENST00000563235 SIRT1Q96EB6 747 aa6.65□□□□□ -1.34
SMG1-207ENST00000563235 MARCH6O60337 910 aa6.65□□□□□ -1.35
SMG1-207ENST00000563235 FXR2P51116 673 aaKnown RBP eCLIP6.65□□□□□ -1.351e-7■■■■□ 20.5
SMG1-207ENST00000563235 FLIIQ13045 1269 aa6.64□□□□□ -1.35
SMG1-207ENST00000563235 PABPN1Q86U42 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMG1-207ENST00000563235 ANKRD13AQ8IZ07 590 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 WWC1Q8IX03 1113 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 KCNG1Q9UIX4 513 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 MYT1LQ9UL68 1186 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 PTMSP20962 102 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 GPATCH11Q8N954 259 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 SLC52A1Q9NWF4 448 aa6.63□□□□□ -1.35
SMG1-207ENST00000563235 PLEKHD1A6NEE1 506 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 CHRM1P11229 460 aaPredicted RBP6.62□□□□□ -1.35
SMG1-207ENST00000563235 GRIPAP1Q4V328 841 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
SMG1-207ENST00000563235 SPDYE2BA6NHP3 402 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 SPDYE6P0CI01 402 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 SPDYE2Q495Y8 402 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 CADPS2Q86UW7 1296 aa6.62□□□□□ -1.35
SMG1-207ENST00000563235 PITPNM1O00562 1244 aa6.61□□□□□ -1.35
SMG1-207ENST00000563235 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 HSP90AB4PQ58FF6 505 aa6.61□□□□□ -1.35
SMG1-207ENST00000563235 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
SMG1-207ENST00000563235 SECISBP2LQ93073 1101 aaKnown RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 EIF4G1Q04637 1599 aaKnown RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 ZNF662Q6ZS27 426 aa6.61□□□□□ -1.35
SMG1-207ENST00000563235 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 DNAJC2Q99543 621 aaKnown RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
SMG1-207ENST00000563235 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
SMG1-207ENST00000563235 FAM9BQ8IZU0 186 aa6.6□□□□□ -1.35
SMG1-207ENST00000563235 CLSPNQ9HAW4 1339 aa6.6□□□□□ -1.35
SMG1-207ENST00000563235 ZC3H4Q9UPT8 1303 aaKnown RBP6.6□□□□□ -1.35
SMG1-207ENST00000563235 PLEKHG3A1L390 1219 aa6.6□□□□□ -1.35
SMG1-207ENST00000563235 CIZ1Q9ULV3 898 aaPredicted RBP6.6□□□□□ -1.35
SMG1-207ENST00000563235 SUGT1Q9Y2Z0 365 aa6.6□□□□□ -1.35
SMG1-207ENST00000563235 MYO15BQ96JP2 1530 aa6.59□□□□□ -1.35
SMG1-207ENST00000563235 POM121Q96HA1 1249 aa6.59□□□□□ -1.35
SMG1-207ENST00000563235 SERPINA10Q9UK55 444 aa6.59□□□□□ -1.35
SMG1-207ENST00000563235 ANKRD62A6NC57 917 aa6.59□□□□□ -1.36
SMG1-207ENST00000563235 MKRN4PQ13434 485 aaPredicted RBP6.59□□□□□ -1.36
SMG1-207ENST00000563235 RBM27Q9P2N5 1060 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms