RNA–Protein interactions for RNA: ENST00000562997.5

PKM-207, Transcript of pyruvate kinase M1/2, humanhuman

TSL 4

Gene PKM, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-207ENST00000562997 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
PKM-207ENST00000562997 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
PKM-207ENST00000562997 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
PKM-207ENST00000562997 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
PKM-207ENST00000562997 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
PKM-207ENST00000562997 KDM5CP41229 1560 aa16.65■□□□□ 0.26
PKM-207ENST00000562997 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
PKM-207ENST00000562997 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
PKM-207ENST00000562997 MAGI2Q86UL8 1455 aa16.64■□□□□ 0.25
PKM-207ENST00000562997 ARHGEF12Q9NZN5 1544 aa16.64■□□□□ 0.25
PKM-207ENST00000562997 LOC105371045A0A1W2PR82 267 aa16.61■□□□□ 0.25
PKM-207ENST00000562997 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
PKM-207ENST00000562997 ABCC1P33527 1531 aa16.6■□□□□ 0.25
PKM-207ENST00000562997 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
PKM-207ENST00000562997 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
PKM-207ENST00000562997 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
PKM-207ENST00000562997 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
PKM-207ENST00000562997 MADDQ8WXG6 1647 aa16.57■□□□□ 0.24
PKM-207ENST00000562997 SAMD9LQ8IVG5 1584 aa16.57■□□□□ 0.24
PKM-207ENST00000562997 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
PKM-207ENST00000562997 TRAPPC8Q9Y2L5 1435 aa16.56■□□□□ 0.24
PKM-207ENST00000562997 PTPRMP28827 1452 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
PKM-207ENST00000562997 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
PKM-207ENST00000562997 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
PKM-207ENST00000562997 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
PKM-207ENST00000562997 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
PKM-207ENST00000562997 ATP10AO60312 1499 aa16.53■□□□□ 0.24
PKM-207ENST00000562997 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
PKM-207ENST00000562997 C9orf84Q5VXU9 1444 aa16.49■□□□□ 0.23
PKM-207ENST00000562997 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
PKM-207ENST00000562997 RIMS1Q86UR5 1692 aaKnown RBP16.49■□□□□ 0.23
PKM-207ENST00000562997 SYCP2Q9BX26 1530 aa16.49■□□□□ 0.23
PKM-207ENST00000562997 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
PKM-207ENST00000562997 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
PKM-207ENST00000562997 AGLP35573 1532 aa16.46■□□□□ 0.23
PKM-207ENST00000562997 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
PKM-207ENST00000562997 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
PKM-207ENST00000562997 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.22
PKM-207ENST00000562997 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
PKM-207ENST00000562997 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
PKM-207ENST00000562997 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
PKM-207ENST00000562997 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
PKM-207ENST00000562997 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
PKM-207ENST00000562997 ARID4BQ4LE39 1312 aaPredicted RBP16.42■□□□□ 0.22
PKM-207ENST00000562997 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
PKM-207ENST00000562997 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
PKM-207ENST00000562997 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
PKM-207ENST00000562997 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
PKM-207ENST00000562997 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
PKM-207ENST00000562997 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
PKM-207ENST00000562997 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
PKM-207ENST00000562997 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
PKM-207ENST00000562997 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
PKM-207ENST00000562997 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
PKM-207ENST00000562997 C3P01024 1663 aa16.34■□□□□ 0.21
PKM-207ENST00000562997 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
PKM-207ENST00000562997 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
PKM-207ENST00000562997 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.2
PKM-207ENST00000562997 ARHGEF5Q12774 1597 aa16.33■□□□□ 0.2
PKM-207ENST00000562997 MLECQ14165 292 aa16.32■□□□□ 0.2
PKM-207ENST00000562997 A2MP01023 1474 aa16.3■□□□□ 0.2
PKM-207ENST00000562997 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
PKM-207ENST00000562997 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
PKM-207ENST00000562997 PREX1Q8TCU6 1659 aa16.28■□□□□ 0.2
PKM-207ENST00000562997 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
PKM-207ENST00000562997 MAST1Q9Y2H9 1570 aa16.27■□□□□ 0.2
PKM-207ENST00000562997 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.2
PKM-207ENST00000562997 MIA2Q96PC5 1412 aa16.27■□□□□ 0.19
PKM-207ENST00000562997 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
PKM-207ENST00000562997 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
PKM-207ENST00000562997 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
PKM-207ENST00000562997 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
PKM-207ENST00000562997 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
PKM-207ENST00000562997 MYT1LQ9UL68 1186 aa16.22■□□□□ 0.19
PKM-207ENST00000562997 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
PKM-207ENST00000562997 HSPA2P54652 639 aa16.2■□□□□ 0.18
PKM-207ENST00000562997 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
PKM-207ENST00000562997 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
PKM-207ENST00000562997 NPATQ14207 1427 aa16.19■□□□□ 0.18
PKM-207ENST00000562997 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
PKM-207ENST00000562997 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
PKM-207ENST00000562997 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
PKM-207ENST00000562997 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
PKM-207ENST00000562997 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
PKM-207ENST00000562997 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
PKM-207ENST00000562997 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
PKM-207ENST00000562997 ABCC5O15440 1437 aa16.15■□□□□ 0.18
PKM-207ENST00000562997 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
PKM-207ENST00000562997 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
PKM-207ENST00000562997 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.18
PKM-207ENST00000562997 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
PKM-207ENST00000562997 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
PKM-207ENST00000562997 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
PKM-207ENST00000562997 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
PKM-207ENST00000562997 GGT6Q6P531 493 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms