RNA–Protein interactions for RNA: ENST00000562341.1

AP005233.1-201, humanhuman

TSL 2 BASIC

Gene AP005233.1, Length 2,424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.1-201ENST00000562341 FOXD1Q16676 465 aa28.6■■■□□ 2.17
AP005233.1-201ENST00000562341 C11orf95C9JLR9 678 aaPredicted RBP28.6■■■□□ 2.17
AP005233.1-201ENST00000562341 WDR62O43379 1518 aa28.58■■■□□ 2.17
AP005233.1-201ENST00000562341 PPP4R2Q9NY27 417 aa28.58■■■□□ 2.17
AP005233.1-201ENST00000562341 POLR1AO95602 1720 aaPredicted RBP28.57■■■□□ 2.16
AP005233.1-201ENST00000562341 FAM9BQ8IZU0 186 aa28.56■■■□□ 2.16
AP005233.1-201ENST00000562341 RPRD2Q5VT52 1461 aaKnown RBP28.56■■■□□ 2.16
AP005233.1-201ENST00000562341 MRS2Q9HD23 443 aa28.55■■■□□ 2.16
AP005233.1-201ENST00000562341 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
AP005233.1-201ENST00000562341 DAPK1P53355 1430 aa28.52■■■□□ 2.16
AP005233.1-201ENST00000562341 ROCK1Q13464 1354 aa28.52■■■□□ 2.16
AP005233.1-201ENST00000562341 ZBED9Q6R2W3 1325 aa28.51■■■□□ 2.16
AP005233.1-201ENST00000562341 TEX14Q8IWB6 1497 aa28.51■■■□□ 2.16
AP005233.1-201ENST00000562341 ARID3CA6NKF2 412 aa28.51■■■□□ 2.15
AP005233.1-201ENST00000562341 NBPF8Q3BBV2 869 aa28.51■■■□□ 2.15
AP005233.1-201ENST00000562341 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
AP005233.1-201ENST00000562341 DNMT1P26358 1616 aaKnown RBP28.5■■■□□ 2.15
AP005233.1-201ENST00000562341 BCL11AQ9H165 835 aa28.48■■■□□ 2.15
AP005233.1-201ENST00000562341 KIF7Q2M1P5 1343 aa28.45■■■□□ 2.15
AP005233.1-201ENST00000562341 SPATA31E1Q6ZUB1 1445 aa28.45■■■□□ 2.14
AP005233.1-201ENST00000562341 ABCC5O15440 1437 aa28.44■■■□□ 2.14
AP005233.1-201ENST00000562341 ERICH6Q7L0X2 663 aa28.44■■■□□ 2.14
AP005233.1-201ENST00000562341 SLC4A1APQ9BWU0 796 aaKnown RBP28.42■■■□□ 2.14
AP005233.1-201ENST00000562341 B4GALNT3Q6L9W6 998 aa28.38■■■□□ 2.13
AP005233.1-201ENST00000562341 ZNF644Q9H582 1327 aaPredicted RBP28.35■■■□□ 2.13
AP005233.1-201ENST00000562341 KIAA0556O60303 1618 aa28.32■■■□□ 2.12
AP005233.1-201ENST00000562341 NUP153P49790 1475 aaKnown RBP28.3■■■□□ 2.12
AP005233.1-201ENST00000562341 RAPGEF6Q8TEU7 1601 aa28.3■■■□□ 2.12
AP005233.1-201ENST00000562341 PZPP20742 1482 aa28.29■■■□□ 2.12
AP005233.1-201ENST00000562341 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
AP005233.1-201ENST00000562341 ADGBQ8N7X0 1667 aa28.28■■■□□ 2.12
AP005233.1-201ENST00000562341 DISP1Q96F81 1524 aa28.27■■■□□ 2.12
AP005233.1-201ENST00000562341 SMG6Q86US8 1419 aaKnown RBP28.25■■■□□ 2.11
AP005233.1-201ENST00000562341 DHX29Q7Z478 1369 aaKnown RBP28.25■■■□□ 2.11
AP005233.1-201ENST00000562341 MBD5Q9P267 1494 aa28.25■■■□□ 2.11
AP005233.1-201ENST00000562341 BCORL1Q5H9F3 1711 aa28.24■■■□□ 2.11
AP005233.1-201ENST00000562341 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
AP005233.1-201ENST00000562341 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
AP005233.1-201ENST00000562341 CAMSAP2Q08AD1 1489 aa28.22■■■□□ 2.11
AP005233.1-201ENST00000562341 USP47Q96K76 1375 aa28.21■■■□□ 2.11
AP005233.1-201ENST00000562341 KIF14Q15058 1648 aa28.21■■■□□ 2.11
AP005233.1-201ENST00000562341 KIAA1107Q9UPP5 1409 aa28.2■■■□□ 2.11
AP005233.1-201ENST00000562341 POLR3GLQ9BT43 218 aa28.19■■■□□ 2.1
AP005233.1-201ENST00000562341 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
AP005233.1-201ENST00000562341 NUDCQ9Y266 331 aa28.18■■■□□ 2.1
AP005233.1-201ENST00000562341 CNGB1Q14028 1251 aaPredicted RBP28.18■■■□□ 2.1
AP005233.1-201ENST00000562341 KDM5CP41229 1560 aa28.17■■■□□ 2.1
AP005233.1-201ENST00000562341 ZNF326Q5BKZ1 582 aaKnown RBP28.17■■■□□ 2.1
AP005233.1-201ENST00000562341 CFDP1Q9UEE9 299 aaPredicted RBP28.17■■■□□ 2.1
AP005233.1-201ENST00000562341 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
AP005233.1-201ENST00000562341 TROQ12816 1431 aaPredicted RBP28.16■■■□□ 2.1
AP005233.1-201ENST00000562341 ARID4BQ4LE39 1312 aaPredicted RBP28.15■■■□□ 2.1
AP005233.1-201ENST00000562341 PRG4Q92954 1404 aaPredicted RBP28.15■■■□□ 2.1
AP005233.1-201ENST00000562341 ADGRL2O95490 1459 aa28.13■■■□□ 2.09
AP005233.1-201ENST00000562341 ZNF608Q9ULD9 1512 aaPredicted RBP28.12■■■□□ 2.09
AP005233.1-201ENST00000562341 PKD2Q13563 968 aa28.11■■■□□ 2.09
AP005233.1-201ENST00000562341 RNF123Q5XPI4 1314 aa28.11■■■□□ 2.09
AP005233.1-201ENST00000562341 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
AP005233.1-201ENST00000562341 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
AP005233.1-201ENST00000562341 MYT1LQ9UL68 1186 aa28.1■■■□□ 2.09
AP005233.1-201ENST00000562341 ADCY10Q96PN6 1610 aa28.09■■■□□ 2.09
AP005233.1-201ENST00000562341 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
AP005233.1-201ENST00000562341 ROCK2O75116 1388 aaKnown RBP28.07■■■□□ 2.08
AP005233.1-201ENST00000562341 ANKRD30AQ9BXX3 1397 aa28.07■■■□□ 2.08
AP005233.1-201ENST00000562341 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
AP005233.1-201ENST00000562341 CCDC136Q96JN2 1154 aa28.06■■■□□ 2.08
AP005233.1-201ENST00000562341 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
AP005233.1-201ENST00000562341 RALGAPBQ86X10 1494 aa28.04■■■□□ 2.08
AP005233.1-201ENST00000562341 PNISRQ8TF01 805 aaKnown RBP28.03■■■□□ 2.08
AP005233.1-201ENST00000562341 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
AP005233.1-201ENST00000562341 NOP58Q9Y2X3 529 aaKnown RBP28.02■■■□□ 2.08
AP005233.1-201ENST00000562341 ANKRD50Q9ULJ7 1429 aa28.02■■■□□ 2.08
AP005233.1-201ENST00000562341 PLB1Q6P1J6 1458 aa28■■■□□ 2.07
AP005233.1-201ENST00000562341 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
AP005233.1-201ENST00000562341 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
AP005233.1-201ENST00000562341 ARHGEF12Q9NZN5 1544 aa27.97■■■□□ 2.07
AP005233.1-201ENST00000562341 SENP3-EIF4A1A0A087X0R7 540 aa27.96■■■□□ 2.07
AP005233.1-201ENST00000562341 EIF4G3O43432 1585 aaKnown RBP27.95■■■□□ 2.07
AP005233.1-201ENST00000562341 NUP155O75694 1391 aa27.94■■■□□ 2.06
AP005233.1-201ENST00000562341 CDC42BPAQ5VT25 1732 aa27.93■■■□□ 2.06
AP005233.1-201ENST00000562341 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
AP005233.1-201ENST00000562341 BRD4O60885 1362 aaPredicted RBP27.9■■■□□ 2.06
AP005233.1-201ENST00000562341 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
AP005233.1-201ENST00000562341 SHANK2Q9UPX8 1470 aa27.9■■■□□ 2.06
AP005233.1-201ENST00000562341 ANP32AP39687 249 aaKnown RBP27.9■■■□□ 2.06
AP005233.1-201ENST00000562341 PAK3O75914 559 aaPredicted RBP27.89■■■□□ 2.06
AP005233.1-201ENST00000562341 MYBBP1AQ9BQG0 1328 aaKnown RBP27.89■■■□□ 2.06
AP005233.1-201ENST00000562341 E9PCH4 1651 aa27.89■■■□□ 2.05
AP005233.1-201ENST00000562341 C9orf84Q5VXU9 1444 aa27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 ST20-MTHFSA0A0A6YYL1 179 aa27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 CEP170Q5SW79 1584 aa27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 KDM5DQ9BY66 1539 aa27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 DEKP35659 375 aaKnown RBP27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 RALBP1Q15311 655 aa27.88■■■□□ 2.05
AP005233.1-201ENST00000562341 KDM2AQ9Y2K7 1162 aa27.87■■■□□ 2.05
AP005233.1-201ENST00000562341 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
AP005233.1-201ENST00000562341 IPO9Q96P70 1041 aaKnown RBP27.84■■■□□ 2.05
AP005233.1-201ENST00000562341 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
AP005233.1-201ENST00000562341 NBR1Q14596 966 aa27.82■■■□□ 2.04
AP005233.1-201ENST00000562341 DCAF11Q8TEB1 546 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms