RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
COMMD4-205ENST00000562310 CROCC2H7BZ55 1655 aa21.43■■□□□ 1.02
COMMD4-205ENST00000562310 ITGAEP38570 1179 aa21.42■■□□□ 1.02
COMMD4-205ENST00000562310 AKNAQ7Z591 1439 aa21.41■■□□□ 1.02
COMMD4-205ENST00000562310 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
COMMD4-205ENST00000562310 DAPK1P53355 1430 aa21.39■■□□□ 1.02
COMMD4-205ENST00000562310 ARHGEF5Q12774 1597 aa21.39■■□□□ 1.01
COMMD4-205ENST00000562310 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
COMMD4-205ENST00000562310 GCC2Q8IWJ2 1684 aa21.38■■□□□ 1.01
COMMD4-205ENST00000562310 ADGBQ8N7X0 1667 aa21.38■■□□□ 1.01
COMMD4-205ENST00000562310 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
COMMD4-205ENST00000562310 PLCH2O75038 1416 aa21.37■■□□□ 1.01
COMMD4-205ENST00000562310 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
COMMD4-205ENST00000562310 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
COMMD4-205ENST00000562310 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
COMMD4-205ENST00000562310 PTPRKQ15262 1439 aa21.36■■□□□ 1.01
COMMD4-205ENST00000562310 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
COMMD4-205ENST00000562310 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
COMMD4-205ENST00000562310 ABCC5O15440 1437 aa21.34■■□□□ 1.01
COMMD4-205ENST00000562310 ROCK1Q13464 1354 aa21.33■■□□□ 1
COMMD4-205ENST00000562310 ZNF644Q9H582 1327 aaPredicted RBP21.32■■□□□ 1
COMMD4-205ENST00000562310 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
COMMD4-205ENST00000562310 KIAA1107Q9UPP5 1409 aa21.3■■□□□ 1
COMMD4-205ENST00000562310 HRCP23327 699 aa21.3■■□□□ 1
COMMD4-205ENST00000562310 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
COMMD4-205ENST00000562310 ADGRL2O95490 1459 aa21.29■■□□□ 1
COMMD4-205ENST00000562310 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
COMMD4-205ENST00000562310 RAB3GAP2Q9H2M9 1393 aa21.29■■□□□ 1
COMMD4-205ENST00000562310 ABCC1P33527 1531 aa21.29■■□□□ 1
COMMD4-205ENST00000562310 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
COMMD4-205ENST00000562310 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
COMMD4-205ENST00000562310 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
COMMD4-205ENST00000562310 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
COMMD4-205ENST00000562310 NAIPQ13075 1403 aa21.27■■□□□ 1
COMMD4-205ENST00000562310 GLI2P10070 1586 aa21.27■□□□□ 0.99
COMMD4-205ENST00000562310 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
COMMD4-205ENST00000562310 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-205ENST00000562310 RSPH4AQ5TD94 716 aa21.26■□□□□ 0.99
COMMD4-205ENST00000562310 MAST1Q9Y2H9 1570 aa21.26■□□□□ 0.99
COMMD4-205ENST00000562310 FANCAO15360 1455 aa21.23■□□□□ 0.99
COMMD4-205ENST00000562310 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
COMMD4-205ENST00000562310 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
COMMD4-205ENST00000562310 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-205ENST00000562310 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
COMMD4-205ENST00000562310 DIP2BQ9P265 1576 aa21.2■□□□□ 0.98
COMMD4-205ENST00000562310 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
COMMD4-205ENST00000562310 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
COMMD4-205ENST00000562310 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
COMMD4-205ENST00000562310 CLSPNQ9HAW4 1339 aa21.18■□□□□ 0.98
COMMD4-205ENST00000562310 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
COMMD4-205ENST00000562310 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
COMMD4-205ENST00000562310 PLXNC1O60486 1568 aa21.18■□□□□ 0.98
COMMD4-205ENST00000562310 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
COMMD4-205ENST00000562310 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
COMMD4-205ENST00000562310 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
COMMD4-205ENST00000562310 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
COMMD4-205ENST00000562310 ADGRL1O94910 1474 aa21.14■□□□□ 0.98
COMMD4-205ENST00000562310 NEO1Q92859 1461 aa21.14■□□□□ 0.98
COMMD4-205ENST00000562310 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
COMMD4-205ENST00000562310 KDM6BO15054 1643 aa21.11■□□□□ 0.97
COMMD4-205ENST00000562310 INO80Q9ULG1 1556 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-205ENST00000562310 RTEL1-TNFRSF6BF6WH68 1400 aa21.08■□□□□ 0.97
COMMD4-205ENST00000562310 TRAPPC8Q9Y2L5 1435 aa21.08■□□□□ 0.97
COMMD4-205ENST00000562310 ZFYVE16Q7Z3T8 1539 aa21.08■□□□□ 0.96
COMMD4-205ENST00000562310 KIF15Q9NS87 1388 aa21.08■□□□□ 0.96
COMMD4-205ENST00000562310 SCAPERQ9BY12 1400 aa21.07■□□□□ 0.96
COMMD4-205ENST00000562310 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
COMMD4-205ENST00000562310 ANKRD50Q9ULJ7 1429 aa21.06■□□□□ 0.96
COMMD4-205ENST00000562310 ZNF518AQ6AHZ1 1483 aa21.06■□□□□ 0.96
COMMD4-205ENST00000562310 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
COMMD4-205ENST00000562310 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
COMMD4-205ENST00000562310 KDM5CP41229 1560 aa21.04■□□□□ 0.96
COMMD4-205ENST00000562310 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
COMMD4-205ENST00000562310 POGZQ7Z3K3 1410 aa21.03■□□□□ 0.96
COMMD4-205ENST00000562310 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.96
COMMD4-205ENST00000562310 FAM69CQ0P6D2 419 aa21.01■□□□□ 0.95
COMMD4-205ENST00000562310 SPAG9O60271 1321 aaKnown RBP21.01■□□□□ 0.95
COMMD4-205ENST00000562310 ERBINQ96RT1 1412 aa21■□□□□ 0.95
COMMD4-205ENST00000562310 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
COMMD4-205ENST00000562310 UNC13BO14795 1591 aa20.98■□□□□ 0.95
COMMD4-205ENST00000562310 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
COMMD4-205ENST00000562310 DENND4BO75064 1496 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-205ENST00000562310 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
COMMD4-205ENST00000562310 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
COMMD4-205ENST00000562310 KIDINS220Q9ULH0 1771 aa20.96■□□□□ 0.95
COMMD4-205ENST00000562310 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
COMMD4-205ENST00000562310 EIF2AK4Q9P2K8 1649 aaKnown RBP20.95■□□□□ 0.94
COMMD4-205ENST00000562310 MLH3Q9UHC1 1453 aa20.94■□□□□ 0.94
COMMD4-205ENST00000562310 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
COMMD4-205ENST00000562310 PZPP20742 1482 aa20.91■□□□□ 0.94
COMMD4-205ENST00000562310 ZMYM4Q5VZL5 1548 aa20.91■□□□□ 0.94
COMMD4-205ENST00000562310 MAGI2Q86UL8 1455 aa20.9■□□□□ 0.94
COMMD4-205ENST00000562310 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.94
COMMD4-205ENST00000562310 DEPDC5O75140 1603 aa20.89■□□□□ 0.93
COMMD4-205ENST00000562310 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
COMMD4-205ENST00000562310 MPHOSPH9Q99550 1183 aa20.87■□□□□ 0.93
COMMD4-205ENST00000562310 ABCA6Q8N139 1617 aa20.86■□□□□ 0.93
COMMD4-205ENST00000562310 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
COMMD4-205ENST00000562310 NUP155O75694 1391 aa20.85■□□□□ 0.93
COMMD4-205ENST00000562310 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms