RNA–Protein interactions for RNA: ENST00000560875.1

RNF31-225, Transcript of ring finger protein 31, human

TSL 4

Gene RNF31, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-225	ENST00000560875	FANCA	O15360	1455 aa		31.99	■■■□□ 2.71
RNF31-225	ENST00000560875	CDC42BPB	Q9Y5S2	1711 aa		31.99	■■■□□ 2.71
RNF31-225	ENST00000560875	EFCAB2	Q5VUJ9	269 aa		31.98	■■■□□ 2.71
RNF31-225	ENST00000560875	CCNB3	Q8WWL7	1395 aa		31.97	■■■□□ 2.71
RNF31-225	ENST00000560875	ITSN2	Q9NZM3	1697 aa		31.96	■■■□□ 2.71
RNF31-225	ENST00000560875	ARHGAP5	Q13017	1502 aa		31.95	■■■□□ 2.71
RNF31-225	ENST00000560875	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.93	■■■□□ 2.7
RNF31-225	ENST00000560875	AKNA	Q7Z591	1439 aa		31.92	■■■□□ 2.7
RNF31-225	ENST00000560875	MYOM3	Q5VTT5	1437 aa		31.88	■■■□□ 2.69
RNF31-225	ENST00000560875	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.84	■■■□□ 2.69
RNF31-225	ENST00000560875	ADGRL1	O94910	1474 aa		31.84	■■■□□ 2.69
RNF31-225	ENST00000560875	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.82	■■■□□ 2.68
RNF31-225	ENST00000560875	DENND4B	O75064	1496 aa	Predicted RBP	31.8	■■■□□ 2.68
RNF31-225	ENST00000560875	MIA2	Q96PC5	1412 aa		31.79	■■■□□ 2.68
RNF31-225	ENST00000560875	PLEKHH2	Q8IVE3	1493 aa		31.78	■■■□□ 2.68
RNF31-225	ENST00000560875	FGD6	Q6ZV73	1430 aa		31.78	■■■□□ 2.68
RNF31-225	ENST00000560875	SCAPER	Q9BY12	1400 aa		31.77	■■■□□ 2.68
RNF31-225	ENST00000560875	RICTOR	Q6R327	1708 aa		31.76	■■■□□ 2.67
RNF31-225	ENST00000560875	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.75	■■■□□ 2.67
RNF31-225	ENST00000560875	ABCC1	P33527	1531 aa		31.75	■■■□□ 2.67
RNF31-225	ENST00000560875	SAMD9L	Q8IVG5	1584 aa		31.74	■■■□□ 2.67
RNF31-225	ENST00000560875	RRBP1	Q9P2E9	1410 aa	Known RBP	31.72	■■■□□ 2.67
RNF31-225	ENST00000560875	KIAA1107	Q9UPP5	1409 aa		31.72	■■■□□ 2.67
RNF31-225	ENST00000560875	POGZ	Q7Z3K3	1410 aa		31.69	■■■□□ 2.66
RNF31-225	ENST00000560875	RAPGEF3	O95398	923 aa		31.69	■■■□□ 2.66
RNF31-225	ENST00000560875	ZNF518A	Q6AHZ1	1483 aa		31.68	■■■□□ 2.66
RNF31-225	ENST00000560875	FAM50A	Q14320	339 aa	Known RBP	31.68	■■■□□ 2.66
RNF31-225	ENST00000560875	ZNF644	Q9H582	1327 aa	Predicted RBP	31.68	■■■□□ 2.66
RNF31-225	ENST00000560875	FRMPD1	Q5SYB0	1578 aa		31.68	■■■□□ 2.66
RNF31-225	ENST00000560875	PTPN23	Q9H3S7	1636 aa		31.67	■■■□□ 2.66
RNF31-225	ENST00000560875	TCOF1	Q13428	1488 aa	Known RBP	31.65	■■■□□ 2.66
RNF31-225	ENST00000560875	ZMYM4	Q5VZL5	1548 aa		31.65	■■■□□ 2.66
RNF31-225	ENST00000560875	TRIM26	Q12899	539 aa	Predicted RBP	31.63	■■■□□ 2.65
RNF31-225	ENST00000560875	MAGI2	Q86UL8	1455 aa		31.63	■■■□□ 2.65
RNF31-225	ENST00000560875	SYCP2	Q9BX26	1530 aa		31.63	■■■□□ 2.65
RNF31-225	ENST00000560875	CAMSAP2	Q08AD1	1489 aa		31.62	■■■□□ 2.65
RNF31-225	ENST00000560875	ARHGEF12	Q9NZN5	1544 aa		31.62	■■■□□ 2.65
RNF31-225	ENST00000560875	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.61	■■■□□ 2.65
RNF31-225	ENST00000560875	RSPH4A	Q5TD94	716 aa		31.61	■■■□□ 2.65
RNF31-225	ENST00000560875	KDM5C	P41229	1560 aa		31.6	■■■□□ 2.65
RNF31-225	ENST00000560875	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.57	■■■□□ 2.64
RNF31-225	ENST00000560875	TRAPPC8	Q9Y2L5	1435 aa		31.57	■■■□□ 2.64
RNF31-225	ENST00000560875	AFAP1	Q8N556	730 aa		31.55	■■■□□ 2.64
RNF31-225	ENST00000560875	MBD5	Q9P267	1494 aa		31.54	■■■□□ 2.64
RNF31-225	ENST00000560875	ARHGEF5	Q12774	1597 aa		31.54	■■■□□ 2.64
RNF31-225	ENST00000560875	HECW2	Q9P2P5	1572 aa		31.53	■■■□□ 2.64
RNF31-225	ENST00000560875	MLH3	Q9UHC1	1453 aa		31.52	■■■□□ 2.64
RNF31-225	ENST00000560875	ZFYVE16	Q7Z3T8	1539 aa		31.51	■■■□□ 2.63
RNF31-225	ENST00000560875	ARHGEF40	Q8TER5	1519 aa		31.49	■■■□□ 2.63
RNF31-225	ENST00000560875	CCDC141	Q6ZP82	1450 aa		31.49	■■■□□ 2.63
RNF31-225	ENST00000560875	ITGAE	P38570	1179 aa		31.48	■■■□□ 2.63
RNF31-225	ENST00000560875	SPAG9	O60271	1321 aa	Known RBP	31.47	■■■□□ 2.63
RNF31-225	ENST00000560875	MYT1L	Q9UL68	1186 aa		31.46	■■■□□ 2.63
RNF31-225	ENST00000560875	KIDINS220	Q9ULH0	1771 aa		31.44	■■■□□ 2.62
RNF31-225	ENST00000560875	ABCC5	O15440	1437 aa		31.43	■■■□□ 2.62
RNF31-225	ENST00000560875	TSPY4	P0CV99	314 aa		31.43	■■■□□ 2.62
RNF31-225	ENST00000560875	TSPY10	P0CW01	314 aa		31.43	■■■□□ 2.62
RNF31-225	ENST00000560875	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.42	■■■□□ 2.62
RNF31-225	ENST00000560875	DAPK1	P53355	1430 aa		31.42	■■■□□ 2.62
RNF31-225	ENST00000560875	INO80	Q9ULG1	1556 aa	Predicted RBP	31.42	■■■□□ 2.62
RNF31-225	ENST00000560875	ATP7A	Q04656	1500 aa		31.41	■■■□□ 2.62
RNF31-225	ENST00000560875	DNMT1	P26358	1616 aa	Known RBP	31.41	■■■□□ 2.62
RNF31-225	ENST00000560875	YEATS2	Q9ULM3	1422 aa		31.4	■■■□□ 2.62
RNF31-225	ENST00000560875	ATP10A	O60312	1499 aa		31.4	■■■□□ 2.62
RNF31-225	ENST00000560875	MAST1	Q9Y2H9	1570 aa		31.37	■■■□□ 2.61
RNF31-225	ENST00000560875	DIP2C	Q9Y2E4	1556 aa		31.36	■■■□□ 2.61
RNF31-225	ENST00000560875	CROCC2	H7BZ55	1655 aa		31.35	■■■□□ 2.61
RNF31-225	ENST00000560875	ABCA6	Q8N139	1617 aa		31.35	■■■□□ 2.61
RNF31-225	ENST00000560875	PTPRK	Q15262	1439 aa		31.35	■■■□□ 2.61
RNF31-225	ENST00000560875	RERE	Q9P2R6	1566 aa		31.34	■■■□□ 2.61
RNF31-225	ENST00000560875	C9orf84	Q5VXU9	1444 aa		31.34	■■■□□ 2.61
RNF31-225	ENST00000560875	PCGF6	Q9BYE7	350 aa		31.34	■■■□□ 2.61
RNF31-225	ENST00000560875	CHIC2	Q9UKJ5	165 aa		31.34	■■■□□ 2.61
RNF31-225	ENST00000560875	ADGB	Q8N7X0	1667 aa		31.33	■■■□□ 2.61
RNF31-225	ENST00000560875	SHANK2	Q9UPX8	1470 aa		31.33	■■■□□ 2.61
RNF31-225	ENST00000560875	PLXNC1	O60486	1568 aa		31.24	■■■□□ 2.59
RNF31-225	ENST00000560875	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.24	■■■□□ 2.59
RNF31-225	ENST00000560875	ROCK1	Q13464	1354 aa		31.22	■■■□□ 2.59
RNF31-225	ENST00000560875	ANKRD30A	Q9BXX3	1397 aa		31.22	■■■□□ 2.59
RNF31-225	ENST00000560875	AGL	P35573	1532 aa		31.22	■■■□□ 2.59
RNF31-225	ENST00000560875	A2M	P01023	1474 aa		31.21	■■■□□ 2.59
RNF31-225	ENST00000560875	RRP7BP	Q9NSQ0	103 aa		31.2	■■■□□ 2.59
RNF31-225	ENST00000560875	ADGRL2	O95490	1459 aa		31.2	■■■□□ 2.58
RNF31-225	ENST00000560875	NCOA1	Q15788	1441 aa		31.19	■■■□□ 2.58
RNF31-225	ENST00000560875	BCORL1	Q5H9F3	1711 aa		31.18	■■■□□ 2.58
RNF31-225	ENST00000560875	SIGLEC1	Q9BZZ2	1709 aa		31.18	■■■□□ 2.58
RNF31-225	ENST00000560875	DHX29	Q7Z478	1369 aa	Known RBP	31.17	■■■□□ 2.58
RNF31-225	ENST00000560875	DUOX2	Q9NRD8	1548 aa		31.12	■■■□□ 2.57
RNF31-225	ENST00000560875	KIF15	Q9NS87	1388 aa		31.11	■■■□□ 2.57
RNF31-225	ENST00000560875	HFM1	A2PYH4	1435 aa		31.1	■■■□□ 2.57
RNF31-225	ENST00000560875	ADAMTSL3	P82987	1691 aa		31.09	■■■□□ 2.57
RNF31-225	ENST00000560875	NAIP	Q13075	1403 aa		31.08	■■■□□ 2.57
RNF31-225	ENST00000560875	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.07	■■■□□ 2.56
RNF31-225	ENST00000560875	SETD5	Q9C0A6	1442 aa		31.06	■■■□□ 2.56
RNF31-225	ENST00000560875	KDM4F	A0A1W2PPD8	638 aa		31.03	■■■□□ 2.56
RNF31-225	ENST00000560875	ERBIN	Q96RT1	1412 aa		31.03	■■■□□ 2.56
RNF31-225	ENST00000560875	FER1L4	A9Z1Z3	1794 aa		31.02	■■■□□ 2.56
RNF31-225	ENST00000560875	MLEC	Q14165	292 aa		31.01	■■■□□ 2.55
RNF31-225	ENST00000560875	PPP6R1	Q9UPN7	881 aa		31.01	■■■□□ 2.55
RNF31-225	ENST00000560875	ANKRD50	Q9ULJ7	1429 aa		31	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms