RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
TPM1-222ENST00000560131 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
TPM1-222ENST00000560131 DNAJC5Q9H3Z4 198 aa9.44□□□□□ -0.9
TPM1-222ENST00000560131 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
TPM1-222ENST00000560131 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
TPM1-222ENST00000560131 G3V3G9 751 aa9.42□□□□□ -0.9
TPM1-222ENST00000560131 NBR1Q14596 966 aa9.4□□□□□ -0.9
TPM1-222ENST00000560131 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
TPM1-222ENST00000560131 PTGER2P43116 358 aa9.39□□□□□ -0.91
TPM1-222ENST00000560131 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
TPM1-222ENST00000560131 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
TPM1-222ENST00000560131 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
TPM1-222ENST00000560131 PSEN1P49768 467 aa9.38□□□□□ -0.91
TPM1-222ENST00000560131 GSE1Q14687 1217 aa9.38□□□□□ -0.91
TPM1-222ENST00000560131 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
TPM1-222ENST00000560131 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
TPM1-222ENST00000560131 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
TPM1-222ENST00000560131 RNF25Q96BH1 459 aaPredicted RBP9.32□□□□□ -0.92
TPM1-222ENST00000560131 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
TPM1-222ENST00000560131 ZSWIM6Q9HCJ5 1215 aa9.29□□□□□ -0.92
TPM1-222ENST00000560131 RIOK3O14730 519 aaKnown RBP9.28□□□□□ -0.92
TPM1-222ENST00000560131 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
TPM1-222ENST00000560131 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
TPM1-222ENST00000560131 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
TPM1-222ENST00000560131 CABP2Q9NPB3 220 aa9.25□□□□□ -0.93
TPM1-222ENST00000560131 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
TPM1-222ENST00000560131 VGFO15240 615 aaPredicted RBP9.22□□□□□ -0.93
TPM1-222ENST00000560131 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
TPM1-222ENST00000560131 STK25O00506 426 aa9.21□□□□□ -0.94
TPM1-222ENST00000560131 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
TPM1-222ENST00000560131 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
TPM1-222ENST00000560131 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
TPM1-222ENST00000560131 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
TPM1-222ENST00000560131 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
TPM1-222ENST00000560131 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
TPM1-222ENST00000560131 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
TPM1-222ENST00000560131 STK24Q9Y6E0 443 aa9.13□□□□□ -0.95
TPM1-222ENST00000560131 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
TPM1-222ENST00000560131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.11□□□□□ -0.95
TPM1-222ENST00000560131 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
TPM1-222ENST00000560131 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
TPM1-222ENST00000560131 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
TPM1-222ENST00000560131 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
TPM1-222ENST00000560131 ERICH6Q7L0X2 663 aa9.09□□□□□ -0.95
TPM1-222ENST00000560131 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
TPM1-222ENST00000560131 PBX2P40425 430 aa9.07□□□□□ -0.96
TPM1-222ENST00000560131 TMEM132AQ24JP5 1023 aa9.07□□□□□ -0.96
TPM1-222ENST00000560131 EFCAB3Q8N7B9 438 aa9.07□□□□□ -0.96
TPM1-222ENST00000560131 KHSRPQ92945 711 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM1-222ENST00000560131 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
TPM1-222ENST00000560131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.98□□□□□ -0.97
TPM1-222ENST00000560131 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
TPM1-222ENST00000560131 SOX12O15370 315 aa8.97□□□□□ -0.97
TPM1-222ENST00000560131 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
TPM1-222ENST00000560131 KCNV2Q8TDN2 545 aa8.96□□□□□ -0.98
TPM1-222ENST00000560131 RGS20O76081 388 aa8.95□□□□□ -0.98
TPM1-222ENST00000560131 LMOD2Q6P5Q4 547 aa8.95□□□□□ -0.98
TPM1-222ENST00000560131 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
TPM1-222ENST00000560131 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
TPM1-222ENST00000560131 ADGRD1Q6QNK2 874 aa8.94□□□□□ -0.98
TPM1-222ENST00000560131 NUDT7P0C024 238 aa8.93□□□□□ -0.98
TPM1-222ENST00000560131 MS4A4AQ96JQ5 239 aa8.93□□□□□ -0.98
TPM1-222ENST00000560131 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
TPM1-222ENST00000560131 ARHGAP33O14559 1287 aa8.9□□□□□ -0.98
TPM1-222ENST00000560131 ARXQ96QS3 562 aa8.9□□□□□ -0.98
TPM1-222ENST00000560131 TK2O00142 265 aa8.88□□□□□ -0.99
TPM1-222ENST00000560131 PHF8Q9UPP1 1060 aa8.88□□□□□ -0.99
TPM1-222ENST00000560131 ARHGEF1Q92888 912 aaKnown RBP8.87□□□□□ -0.99
TPM1-222ENST00000560131 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
TPM1-222ENST00000560131 MFRPQ9BY79 579 aa8.86□□□□□ -0.99
TPM1-222ENST00000560131 HRO43593 1189 aa8.85□□□□□ -0.99
TPM1-222ENST00000560131 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
TPM1-222ENST00000560131 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
TPM1-222ENST00000560131 STAC3Q96MF2 364 aa8.84□□□□□ -0.99
TPM1-222ENST00000560131 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
TPM1-222ENST00000560131 SLC34A2O95436 690 aa8.83□□□□□ -1
TPM1-222ENST00000560131 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
TPM1-222ENST00000560131 IFFO2Q5TF58 517 aa8.83□□□□□ -1
TPM1-222ENST00000560131 E2F4Q16254 413 aa8.82□□□□□ -1
TPM1-222ENST00000560131 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
TPM1-222ENST00000560131 C2orf72A6NCS6 295 aa8.8□□□□□ -1
TPM1-222ENST00000560131 KIF3CO14782 793 aa8.8□□□□□ -1
TPM1-222ENST00000560131 PPP1R37O75864 691 aa8.79□□□□□ -1
TPM1-222ENST00000560131 NLRP6P59044 892 aa8.79□□□□□ -1
TPM1-222ENST00000560131 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
TPM1-222ENST00000560131 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
TPM1-222ENST00000560131 A0A0G2JS52 829 aa8.76□□□□□ -1.01
TPM1-222ENST00000560131 SEMA3EO15041 775 aa8.76□□□□□ -1.01
TPM1-222ENST00000560131 PSEN2P49810 448 aa8.76□□□□□ -1.01
TPM1-222ENST00000560131 PTPN5P54829 565 aa8.76□□□□□ -1.01
TPM1-222ENST00000560131 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
TPM1-222ENST00000560131 NEUROD2Q15784 382 aa8.75□□□□□ -1.01
TPM1-222ENST00000560131 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
TPM1-222ENST00000560131 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
TPM1-222ENST00000560131 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
TPM1-222ENST00000560131 PDE4AP27815 886 aa8.71□□□□□ -1.02
TPM1-222ENST00000560131 Q6ZNB5 142 aa8.71□□□□□ -1.02
TPM1-222ENST00000560131 ZMYND10O75800 440 aa8.7□□□□□ -1.02
TPM1-222ENST00000560131 TMC2Q8TDI7 906 aa8.69□□□□□ -1.02
TPM1-222ENST00000560131 LARP6Q9BRS8 491 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms