RNA–Protein interactions for RNA: ENST00000559557.1

MRPS11-208, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 3

Gene MRPS11, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-208ENST00000559557 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
MRPS11-208ENST00000559557 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
MRPS11-208ENST00000559557 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
MRPS11-208ENST00000559557 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
MRPS11-208ENST00000559557 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
MRPS11-208ENST00000559557 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
MRPS11-208ENST00000559557 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
MRPS11-208ENST00000559557 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
MRPS11-208ENST00000559557 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
MRPS11-208ENST00000559557 PPP1R37O75864 691 aa12.79□□□□□ -0.36
MRPS11-208ENST00000559557 ERBB3P21860 1342 aa12.77□□□□□ -0.37
MRPS11-208ENST00000559557 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
MRPS11-208ENST00000559557 KIF3CO14782 793 aa12.75□□□□□ -0.37
MRPS11-208ENST00000559557 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
MRPS11-208ENST00000559557 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
MRPS11-208ENST00000559557 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
MRPS11-208ENST00000559557 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
MRPS11-208ENST00000559557 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
MRPS11-208ENST00000559557 SLC34A2O95436 690 aa12.65□□□□□ -0.38
MRPS11-208ENST00000559557 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
MRPS11-208ENST00000559557 FOXK1P85037 733 aa12.63□□□□□ -0.39
MRPS11-208ENST00000559557 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
MRPS11-208ENST00000559557 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
MRPS11-208ENST00000559557 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
MRPS11-208ENST00000559557 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
MRPS11-208ENST00000559557 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
MRPS11-208ENST00000559557 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
MRPS11-208ENST00000559557 TBC1D12O60347 775 aa12.58□□□□□ -0.4
MRPS11-208ENST00000559557 NUDT7P0C024 238 aa12.57□□□□□ -0.4
MRPS11-208ENST00000559557 PDE4AP27815 886 aa12.57□□□□□ -0.4
MRPS11-208ENST00000559557 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
MRPS11-208ENST00000559557 DSG2Q14126 1118 aa12.56□□□□□ -0.4
MRPS11-208ENST00000559557 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
MRPS11-208ENST00000559557 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
MRPS11-208ENST00000559557 KRTAP3-3Q9BYR6 98 aa12.54□□□□□ -0.4
MRPS11-208ENST00000559557 KRTAP3-2Q9BYR7 98 aa12.54□□□□□ -0.4
MRPS11-208ENST00000559557 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
MRPS11-208ENST00000559557 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
MRPS11-208ENST00000559557 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
MRPS11-208ENST00000559557 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
MRPS11-208ENST00000559557 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
MRPS11-208ENST00000559557 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
MRPS11-208ENST00000559557 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
MRPS11-208ENST00000559557 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
MRPS11-208ENST00000559557 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
MRPS11-208ENST00000559557 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
MRPS11-208ENST00000559557 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
MRPS11-208ENST00000559557 PBX2P40425 430 aa12.45□□□□□ -0.42
MRPS11-208ENST00000559557 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
MRPS11-208ENST00000559557 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
MRPS11-208ENST00000559557 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
MRPS11-208ENST00000559557 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
MRPS11-208ENST00000559557 PTGER2P43116 358 aa12.39□□□□□ -0.43
MRPS11-208ENST00000559557 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
MRPS11-208ENST00000559557 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
MRPS11-208ENST00000559557 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
MRPS11-208ENST00000559557 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPS11-208ENST00000559557 MFSD10Q14728 455 aa12.37□□□□□ -0.43
MRPS11-208ENST00000559557 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
MRPS11-208ENST00000559557 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
MRPS11-208ENST00000559557 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
MRPS11-208ENST00000559557 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
MRPS11-208ENST00000559557 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
MRPS11-208ENST00000559557 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
MRPS11-208ENST00000559557 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
MRPS11-208ENST00000559557 RNF166Q96A37 237 aaPredicted RBP12.3□□□□□ -0.44
MRPS11-208ENST00000559557 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
MRPS11-208ENST00000559557 EVI5O60447 810 aa12.28□□□□□ -0.44
MRPS11-208ENST00000559557 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
MRPS11-208ENST00000559557 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
MRPS11-208ENST00000559557 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
MRPS11-208ENST00000559557 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
MRPS11-208ENST00000559557 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
MRPS11-208ENST00000559557 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
MRPS11-208ENST00000559557 TK2O00142 265 aa12.21□□□□□ -0.45
MRPS11-208ENST00000559557 FOSBP53539 338 aa12.21□□□□□ -0.45
MRPS11-208ENST00000559557 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
MRPS11-208ENST00000559557 EMILIN3Q9NT22 766 aa12.21□□□□□ -0.45
MRPS11-208ENST00000559557 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
MRPS11-208ENST00000559557 PSEN2P49810 448 aa12.2□□□□□ -0.46
MRPS11-208ENST00000559557 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
MRPS11-208ENST00000559557 PTPREP23469 700 aa12.19□□□□□ -0.46
MRPS11-208ENST00000559557 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
MRPS11-208ENST00000559557 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
MRPS11-208ENST00000559557 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
MRPS11-208ENST00000559557 DPYSL4O14531 572 aa12.14□□□□□ -0.47
MRPS11-208ENST00000559557 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
MRPS11-208ENST00000559557 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
MRPS11-208ENST00000559557 PHF14O94880 888 aa12.1□□□□□ -0.47
MRPS11-208ENST00000559557 E2F4Q16254 413 aa12.1□□□□□ -0.47
MRPS11-208ENST00000559557 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
MRPS11-208ENST00000559557 EPAS1Q99814 870 aa12.08□□□□□ -0.48
MRPS11-208ENST00000559557 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
MRPS11-208ENST00000559557 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
MRPS11-208ENST00000559557 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
MRPS11-208ENST00000559557 HRO43593 1189 aa12.07□□□□□ -0.48
MRPS11-208ENST00000559557 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
MRPS11-208ENST00000559557 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
MRPS11-208ENST00000559557 PPP1R3GB7ZBB8 358 aa12.04□□□□□ -0.48
MRPS11-208ENST00000559557 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms