RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
CASC4-206ENST00000558847 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
CASC4-206ENST00000558847 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
CASC4-206ENST00000558847 HOXB1P14653 301 aaPredicted RBP10.88□□□□□ -0.67
CASC4-206ENST00000558847 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
CASC4-206ENST00000558847 ERBB3P21860 1342 aa10.87□□□□□ -0.67
CASC4-206ENST00000558847 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
CASC4-206ENST00000558847 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
CASC4-206ENST00000558847 DCAF8L2P0C7V8 631 aa10.86□□□□□ -0.67
CASC4-206ENST00000558847 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
CASC4-206ENST00000558847 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CASC4-206ENST00000558847 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
CASC4-206ENST00000558847 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
CASC4-206ENST00000558847 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
CASC4-206ENST00000558847 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
CASC4-206ENST00000558847 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
CASC4-206ENST00000558847 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
CASC4-206ENST00000558847 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
CASC4-206ENST00000558847 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
CASC4-206ENST00000558847 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
CASC4-206ENST00000558847 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
CASC4-206ENST00000558847 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
CASC4-206ENST00000558847 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
CASC4-206ENST00000558847 PPP1R37O75864 691 aa10.7□□□□□ -0.7
CASC4-206ENST00000558847 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
CASC4-206ENST00000558847 KIF3CO14782 793 aa10.69□□□□□ -0.7
CASC4-206ENST00000558847 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
CASC4-206ENST00000558847 ZNF687Q8N1G0 1237 aa10.67□□□□□ -0.7
CASC4-206ENST00000558847 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.7
CASC4-206ENST00000558847 NUDT7P0C024 238 aa10.64□□□□□ -0.71
CASC4-206ENST00000558847 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
CASC4-206ENST00000558847 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
CASC4-206ENST00000558847 SLC34A2O95436 690 aa10.59□□□□□ -0.71
CASC4-206ENST00000558847 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
CASC4-206ENST00000558847 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
CASC4-206ENST00000558847 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
CASC4-206ENST00000558847 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
CASC4-206ENST00000558847 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
CASC4-206ENST00000558847 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
CASC4-206ENST00000558847 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
CASC4-206ENST00000558847 FOXK1P85037 733 aa10.53□□□□□ -0.72
CASC4-206ENST00000558847 GPHNQ9NQX3 736 aaPredicted RBP10.53□□□□□ -0.72
CASC4-206ENST00000558847 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
CASC4-206ENST00000558847 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
CASC4-206ENST00000558847 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
CASC4-206ENST00000558847 PBX2P40425 430 aa10.5□□□□□ -0.73
CASC4-206ENST00000558847 PTGER2P43116 358 aa10.5□□□□□ -0.73
CASC4-206ENST00000558847 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
CASC4-206ENST00000558847 DSG2Q14126 1118 aa10.5□□□□□ -0.73
CASC4-206ENST00000558847 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
CASC4-206ENST00000558847 TBC1D12O60347 775 aa10.49□□□□□ -0.73
CASC4-206ENST00000558847 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
CASC4-206ENST00000558847 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
CASC4-206ENST00000558847 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
CASC4-206ENST00000558847 UPF1Q92900 1129 aaKnown RBP eCLIP10.43□□□□□ -0.74
CASC4-206ENST00000558847 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
CASC4-206ENST00000558847 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
CASC4-206ENST00000558847 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
CASC4-206ENST00000558847 PDE4AP27815 886 aa10.4□□□□□ -0.74
CASC4-206ENST00000558847 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
CASC4-206ENST00000558847 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
CASC4-206ENST00000558847 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
CASC4-206ENST00000558847 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
CASC4-206ENST00000558847 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
CASC4-206ENST00000558847 PSEN2P49810 448 aa10.36□□□□□ -0.75
CASC4-206ENST00000558847 ADGRD1Q6QNK2 874 aa10.36□□□□□ -0.75
CASC4-206ENST00000558847 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
CASC4-206ENST00000558847 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
CASC4-206ENST00000558847 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
CASC4-206ENST00000558847 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
CASC4-206ENST00000558847 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
CASC4-206ENST00000558847 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
CASC4-206ENST00000558847 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
CASC4-206ENST00000558847 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
CASC4-206ENST00000558847 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
CASC4-206ENST00000558847 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
CASC4-206ENST00000558847 TK2O00142 265 aa10.3□□□□□ -0.76
CASC4-206ENST00000558847 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
CASC4-206ENST00000558847 EVI5O60447 810 aa10.26□□□□□ -0.77
CASC4-206ENST00000558847 VSIG10Q8N0Z9 540 aa10.26□□□□□ -0.77
CASC4-206ENST00000558847 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
CASC4-206ENST00000558847 MFSD10Q14728 455 aa10.24□□□□□ -0.77
CASC4-206ENST00000558847 HRO43593 1189 aa10.23□□□□□ -0.77
CASC4-206ENST00000558847 PTPREP23469 700 aa10.23□□□□□ -0.77
CASC4-206ENST00000558847 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
CASC4-206ENST00000558847 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
CASC4-206ENST00000558847 FOSBP53539 338 aa10.22□□□□□ -0.77
CASC4-206ENST00000558847 JPH4Q96JJ6 628 aa10.21□□□□□ -0.77
CASC4-206ENST00000558847 ANO8Q9HCE9 1232 aaPredicted RBP10.2□□□□□ -0.78
CASC4-206ENST00000558847 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
CASC4-206ENST00000558847 ZDHHC16Q969W1 377 aa10.19□□□□□ -0.78
CASC4-206ENST00000558847 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CASC4-206ENST00000558847 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
CASC4-206ENST00000558847 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
CASC4-206ENST00000558847 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
CASC4-206ENST00000558847 ADAM33Q9BZ11 813 aa10.16□□□□□ -0.78
CASC4-206ENST00000558847 PTPN5P54829 565 aa10.14□□□□□ -0.79
CASC4-206ENST00000558847 BCANQ96GW7 911 aa10.13□□□□□ -0.79
CASC4-206ENST00000558847 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
CASC4-206ENST00000558847 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms