RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
APEX1-219ENST00000557365 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
APEX1-219ENST00000557365 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
APEX1-219ENST00000557365 CD109Q6YHK3 1445 aa18.34■□□□□ 0.53
APEX1-219ENST00000557365 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
APEX1-219ENST00000557365 FAM69CQ0P6D2 419 aa18.32■□□□□ 0.52
APEX1-219ENST00000557365 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
APEX1-219ENST00000557365 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
APEX1-219ENST00000557365 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
APEX1-219ENST00000557365 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
APEX1-219ENST00000557365 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
APEX1-219ENST00000557365 NEO1Q92859 1461 aa18.27■□□□□ 0.52
APEX1-219ENST00000557365 FANCAO15360 1455 aa18.26■□□□□ 0.51
APEX1-219ENST00000557365 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
APEX1-219ENST00000557365 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
APEX1-219ENST00000557365 RSPH4AQ5TD94 716 aa18.26■□□□□ 0.51
APEX1-219ENST00000557365 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
APEX1-219ENST00000557365 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
APEX1-219ENST00000557365 PPRC1Q5VV67 1664 aaKnown RBP18.24■□□□□ 0.51
APEX1-219ENST00000557365 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
APEX1-219ENST00000557365 ABCC1P33527 1531 aa18.22■□□□□ 0.51
APEX1-219ENST00000557365 AKNAQ7Z591 1439 aa18.22■□□□□ 0.51
APEX1-219ENST00000557365 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
APEX1-219ENST00000557365 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
APEX1-219ENST00000557365 DNMT1P26358 1616 aaKnown RBP18.21■□□□□ 0.51
APEX1-219ENST00000557365 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
APEX1-219ENST00000557365 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
APEX1-219ENST00000557365 ADGRL1O94910 1474 aa18.18■□□□□ 0.5
APEX1-219ENST00000557365 DAPK1P53355 1430 aa18.17■□□□□ 0.5
APEX1-219ENST00000557365 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
APEX1-219ENST00000557365 ABCC5O15440 1437 aa18.16■□□□□ 0.5
APEX1-219ENST00000557365 CCDC141Q6ZP82 1450 aa18.16■□□□□ 0.5
APEX1-219ENST00000557365 SHANK2Q9UPX8 1470 aa18.16■□□□□ 0.5
APEX1-219ENST00000557365 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
APEX1-219ENST00000557365 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
APEX1-219ENST00000557365 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
APEX1-219ENST00000557365 MAST1Q9Y2H9 1570 aa18.14■□□□□ 0.49
APEX1-219ENST00000557365 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
APEX1-219ENST00000557365 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
APEX1-219ENST00000557365 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
APEX1-219ENST00000557365 ZNF518AQ6AHZ1 1483 aa18.12■□□□□ 0.49
APEX1-219ENST00000557365 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
APEX1-219ENST00000557365 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
APEX1-219ENST00000557365 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
APEX1-219ENST00000557365 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
APEX1-219ENST00000557365 DENND4BO75064 1496 aaPredicted RBP18.11■□□□□ 0.49
APEX1-219ENST00000557365 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
APEX1-219ENST00000557365 POGZQ7Z3K3 1410 aa18.1■□□□□ 0.49
APEX1-219ENST00000557365 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
APEX1-219ENST00000557365 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
APEX1-219ENST00000557365 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
APEX1-219ENST00000557365 KDM5CP41229 1560 aa18.09■□□□□ 0.49
APEX1-219ENST00000557365 RICTORQ6R327 1708 aa18.09■□□□□ 0.49
APEX1-219ENST00000557365 C9orf84Q5VXU9 1444 aa18.07■□□□□ 0.48
APEX1-219ENST00000557365 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
APEX1-219ENST00000557365 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
APEX1-219ENST00000557365 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
APEX1-219ENST00000557365 ITGAEP38570 1179 aa18.05■□□□□ 0.48
APEX1-219ENST00000557365 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
APEX1-219ENST00000557365 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
APEX1-219ENST00000557365 ZMYM4Q5VZL5 1548 aa18.04■□□□□ 0.48
APEX1-219ENST00000557365 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
APEX1-219ENST00000557365 HFM1A2PYH4 1435 aa18.04■□□□□ 0.48
APEX1-219ENST00000557365 INO80Q9ULG1 1556 aaPredicted RBP18.04■□□□□ 0.48
APEX1-219ENST00000557365 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
APEX1-219ENST00000557365 HRCP23327 699 aa18.02■□□□□ 0.48
APEX1-219ENST00000557365 FRMPD1Q5SYB0 1578 aa18.02■□□□□ 0.48
APEX1-219ENST00000557365 ZFYVE16Q7Z3T8 1539 aa18.02■□□□□ 0.47
APEX1-219ENST00000557365 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
APEX1-219ENST00000557365 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
APEX1-219ENST00000557365 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
APEX1-219ENST00000557365 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
APEX1-219ENST00000557365 NAIPQ13075 1403 aa18■□□□□ 0.47
APEX1-219ENST00000557365 KIDINS220Q9ULH0 1771 aa18■□□□□ 0.47
APEX1-219ENST00000557365 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
APEX1-219ENST00000557365 COL17A1Q9UMD9 1497 aaPredicted RBP18■□□□□ 0.47
APEX1-219ENST00000557365 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
APEX1-219ENST00000557365 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
APEX1-219ENST00000557365 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
APEX1-219ENST00000557365 DUOX2Q9NRD8 1548 aa17.96■□□□□ 0.47
APEX1-219ENST00000557365 KDM6BO15054 1643 aa17.95■□□□□ 0.46
APEX1-219ENST00000557365 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
APEX1-219ENST00000557365 ERBINQ96RT1 1412 aa17.92■□□□□ 0.46
APEX1-219ENST00000557365 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
APEX1-219ENST00000557365 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
APEX1-219ENST00000557365 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
APEX1-219ENST00000557365 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
APEX1-219ENST00000557365 ABCA6Q8N139 1617 aa17.9■□□□□ 0.46
APEX1-219ENST00000557365 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
APEX1-219ENST00000557365 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
APEX1-219ENST00000557365 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
APEX1-219ENST00000557365 ATP10AO60312 1499 aa17.88■□□□□ 0.45
APEX1-219ENST00000557365 A2MP01023 1474 aa17.88■□□□□ 0.45
APEX1-219ENST00000557365 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
APEX1-219ENST00000557365 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
APEX1-219ENST00000557365 YEATS2Q9ULM3 1422 aa17.86■□□□□ 0.45
APEX1-219ENST00000557365 AGLP35573 1532 aa17.84■□□□□ 0.45
APEX1-219ENST00000557365 DEPDC5O75140 1603 aa17.82■□□□□ 0.44
APEX1-219ENST00000557365 UNC13BO14795 1591 aa17.82■□□□□ 0.44
APEX1-219ENST00000557365 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms