RNA–Protein interactions for RNA: ENST00000555933.1

TRIM9-205, Transcript of tripartite motif containing 9, humanhuman

TSL 3

Gene TRIM9, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-205ENST00000555933 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
TRIM9-205ENST00000555933 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
TRIM9-205ENST00000555933 KIF3CO14782 793 aa13.8□□□□□ -0.2
TRIM9-205ENST00000555933 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
TRIM9-205ENST00000555933 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
TRIM9-205ENST00000555933 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
TRIM9-205ENST00000555933 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
TRIM9-205ENST00000555933 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
TRIM9-205ENST00000555933 EMP3P54852 163 aa13.73□□□□□ -0.21
TRIM9-205ENST00000555933 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
TRIM9-205ENST00000555933 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
TRIM9-205ENST00000555933 HOXB1P14653 301 aaPredicted RBP13.72□□□□□ -0.21
TRIM9-205ENST00000555933 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
TRIM9-205ENST00000555933 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
TRIM9-205ENST00000555933 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
TRIM9-205ENST00000555933 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
TRIM9-205ENST00000555933 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
TRIM9-205ENST00000555933 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
TRIM9-205ENST00000555933 HS3ST6Q96QI5 342 aa13.63□□□□□ -0.23
TRIM9-205ENST00000555933 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
TRIM9-205ENST00000555933 FOXK1P85037 733 aa13.61□□□□□ -0.23
TRIM9-205ENST00000555933 ARSIQ5FYB1 569 aa13.61□□□□□ -0.23
TRIM9-205ENST00000555933 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
TRIM9-205ENST00000555933 SLC34A2O95436 690 aa13.59□□□□□ -0.23
TRIM9-205ENST00000555933 DSG2Q14126 1118 aa13.58□□□□□ -0.24
TRIM9-205ENST00000555933 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRIM9-205ENST00000555933 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
TRIM9-205ENST00000555933 ERBB3P21860 1342 aa13.57□□□□□ -0.24
TRIM9-205ENST00000555933 PLPP6Q8IY26 295 aa13.56□□□□□ -0.24
TRIM9-205ENST00000555933 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
TRIM9-205ENST00000555933 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
TRIM9-205ENST00000555933 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
TRIM9-205ENST00000555933 NUDT7P0C024 238 aa13.49□□□□□ -0.25
TRIM9-205ENST00000555933 PDE4AP27815 886 aa13.49□□□□□ -0.25
TRIM9-205ENST00000555933 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
TRIM9-205ENST00000555933 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
TRIM9-205ENST00000555933 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
TRIM9-205ENST00000555933 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
TRIM9-205ENST00000555933 KRTAP3-2Q9BYR7 98 aa13.47□□□□□ -0.25
TRIM9-205ENST00000555933 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
TRIM9-205ENST00000555933 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
TRIM9-205ENST00000555933 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
TRIM9-205ENST00000555933 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
TRIM9-205ENST00000555933 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
TRIM9-205ENST00000555933 MFSD10Q14728 455 aa13.41□□□□□ -0.26
TRIM9-205ENST00000555933 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
TRIM9-205ENST00000555933 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
TRIM9-205ENST00000555933 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
TRIM9-205ENST00000555933 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
TRIM9-205ENST00000555933 TBC1D12O60347 775 aa13.38□□□□□ -0.27
TRIM9-205ENST00000555933 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
TRIM9-205ENST00000555933 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM9-205ENST00000555933 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
TRIM9-205ENST00000555933 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
TRIM9-205ENST00000555933 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
TRIM9-205ENST00000555933 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
TRIM9-205ENST00000555933 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
TRIM9-205ENST00000555933 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
TRIM9-205ENST00000555933 PBX2P40425 430 aa13.23□□□□□ -0.29
TRIM9-205ENST00000555933 CAMK2BQ13554 666 aa13.23□□□□□ -0.29
TRIM9-205ENST00000555933 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
TRIM9-205ENST00000555933 EVI5O60447 810 aa13.21□□□□□ -0.29
TRIM9-205ENST00000555933 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
TRIM9-205ENST00000555933 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
TRIM9-205ENST00000555933 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
TRIM9-205ENST00000555933 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM9-205ENST00000555933 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
TRIM9-205ENST00000555933 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
TRIM9-205ENST00000555933 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
TRIM9-205ENST00000555933 FOSBP53539 338 aa13.14□□□□□ -0.31
TRIM9-205ENST00000555933 DPYSL4O14531 572 aa13.12□□□□□ -0.31
TRIM9-205ENST00000555933 PSEN2P49810 448 aa13.12□□□□□ -0.31
TRIM9-205ENST00000555933 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
TRIM9-205ENST00000555933 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
TRIM9-205ENST00000555933 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
TRIM9-205ENST00000555933 PTGER2P43116 358 aa13.08□□□□□ -0.32
TRIM9-205ENST00000555933 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
TRIM9-205ENST00000555933 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
TRIM9-205ENST00000555933 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
TRIM9-205ENST00000555933 E2F4Q16254 413 aa13.07□□□□□ -0.32
TRIM9-205ENST00000555933 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
TRIM9-205ENST00000555933 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
TRIM9-205ENST00000555933 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
TRIM9-205ENST00000555933 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
TRIM9-205ENST00000555933 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
TRIM9-205ENST00000555933 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
TRIM9-205ENST00000555933 TK2O00142 265 aa13.03□□□□□ -0.32
TRIM9-205ENST00000555933 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
TRIM9-205ENST00000555933 PHF14O94880 888 aa13.01□□□□□ -0.33
TRIM9-205ENST00000555933 PTPREP23469 700 aa13.01□□□□□ -0.33
TRIM9-205ENST00000555933 PDIA6Q15084 440 aa13□□□□□ -0.33
TRIM9-205ENST00000555933 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
TRIM9-205ENST00000555933 HRO43593 1189 aa12.98□□□□□ -0.33
TRIM9-205ENST00000555933 TYW1BQ6NUM6 668 aa12.98□□□□□ -0.33
TRIM9-205ENST00000555933 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
TRIM9-205ENST00000555933 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
TRIM9-205ENST00000555933 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
TRIM9-205ENST00000555933 DDX12PQ92771 950 aa12.95□□□□□ -0.34
TRIM9-205ENST00000555933 EPAS1Q99814 870 aa12.95□□□□□ -0.34
TRIM9-205ENST00000555933 VPS9D1Q9Y2B5 631 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms