RNA–Protein interactions for RNA: ENST00000555554.1

CASC1-209, Transcript of cancer susceptibility 1, humanhuman

TSL 3

Gene CASC1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-209ENST00000555554 DCAF8L2P0C7V8 631 aa11.27□□□□□ -0.61
CASC1-209ENST00000555554 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
CASC1-209ENST00000555554 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
CASC1-209ENST00000555554 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
CASC1-209ENST00000555554 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
CASC1-209ENST00000555554 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
CASC1-209ENST00000555554 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
CASC1-209ENST00000555554 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
CASC1-209ENST00000555554 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
CASC1-209ENST00000555554 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
CASC1-209ENST00000555554 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
CASC1-209ENST00000555554 PPP1R37O75864 691 aa11.14□□□□□ -0.63
CASC1-209ENST00000555554 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
CASC1-209ENST00000555554 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
CASC1-209ENST00000555554 KIF3CO14782 793 aa11.11□□□□□ -0.63
CASC1-209ENST00000555554 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
CASC1-209ENST00000555554 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
CASC1-209ENST00000555554 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
CASC1-209ENST00000555554 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
CASC1-209ENST00000555554 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
CASC1-209ENST00000555554 ERBB3P21860 1342 aa11.09□□□□□ -0.63
CASC1-209ENST00000555554 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
CASC1-209ENST00000555554 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
CASC1-209ENST00000555554 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
CASC1-209ENST00000555554 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
CASC1-209ENST00000555554 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
CASC1-209ENST00000555554 ARSIQ5FYB1 569 aa11.05□□□□□ -0.64
CASC1-209ENST00000555554 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
CASC1-209ENST00000555554 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
CASC1-209ENST00000555554 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
CASC1-209ENST00000555554 BCANQ96GW7 911 aa11.01□□□□□ -0.65
CASC1-209ENST00000555554 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
CASC1-209ENST00000555554 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
CASC1-209ENST00000555554 SLC34A2O95436 690 aa10.95□□□□□ -0.66
CASC1-209ENST00000555554 NUDT7P0C024 238 aa10.95□□□□□ -0.66
CASC1-209ENST00000555554 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
CASC1-209ENST00000555554 PCDHGA4Q9Y5G9 962 aa10.95□□□□□ -0.66
CASC1-209ENST00000555554 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
CASC1-209ENST00000555554 FOXK1P85037 733 aa10.91□□□□□ -0.66
CASC1-209ENST00000555554 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
CASC1-209ENST00000555554 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
CASC1-209ENST00000555554 PLPP6Q8IY26 295 aa10.9□□□□□ -0.66
CASC1-209ENST00000555554 DSG2Q14126 1118 aa10.89□□□□□ -0.67
CASC1-209ENST00000555554 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
CASC1-209ENST00000555554 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
CASC1-209ENST00000555554 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
CASC1-209ENST00000555554 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
CASC1-209ENST00000555554 PTCD2Q8WV60 388 aaKnown RBP10.85□□□□□ -0.67
CASC1-209ENST00000555554 CRISPLD2Q9H0B8 497 aa10.83□□□□□ -0.68
CASC1-209ENST00000555554 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
CASC1-209ENST00000555554 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
CASC1-209ENST00000555554 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
CASC1-209ENST00000555554 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
CASC1-209ENST00000555554 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
CASC1-209ENST00000555554 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
CASC1-209ENST00000555554 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
CASC1-209ENST00000555554 PBX2P40425 430 aa10.77□□□□□ -0.69
CASC1-209ENST00000555554 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
CASC1-209ENST00000555554 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
CASC1-209ENST00000555554 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
CASC1-209ENST00000555554 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
CASC1-209ENST00000555554 TBC1D12O60347 775 aa10.75□□□□□ -0.69
CASC1-209ENST00000555554 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
CASC1-209ENST00000555554 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
CASC1-209ENST00000555554 PDE4AP27815 886 aa10.74□□□□□ -0.69
CASC1-209ENST00000555554 PTGER2P43116 358 aa10.72□□□□□ -0.69
CASC1-209ENST00000555554 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
CASC1-209ENST00000555554 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
CASC1-209ENST00000555554 ARHGAP33O14559 1287 aa10.69□□□□□ -0.7
CASC1-209ENST00000555554 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
CASC1-209ENST00000555554 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
CASC1-209ENST00000555554 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
CASC1-209ENST00000555554 MFSD10Q14728 455 aa10.68□□□□□ -0.7
CASC1-209ENST00000555554 PSEN2P49810 448 aa10.66□□□□□ -0.7
CASC1-209ENST00000555554 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
CASC1-209ENST00000555554 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
CASC1-209ENST00000555554 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CASC1-209ENST00000555554 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
CASC1-209ENST00000555554 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
CASC1-209ENST00000555554 EVI5O60447 810 aa10.6□□□□□ -0.71
CASC1-209ENST00000555554 TK2O00142 265 aa10.58□□□□□ -0.72
CASC1-209ENST00000555554 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
CASC1-209ENST00000555554 FOSBP53539 338 aa10.58□□□□□ -0.72
CASC1-209ENST00000555554 NBR1Q14596 966 aa10.58□□□□□ -0.72
CASC1-209ENST00000555554 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
CASC1-209ENST00000555554 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
CASC1-209ENST00000555554 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
CASC1-209ENST00000555554 HRO43593 1189 aa10.56□□□□□ -0.72
CASC1-209ENST00000555554 JPH4Q96JJ6 628 aa10.56□□□□□ -0.72
CASC1-209ENST00000555554 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
CASC1-209ENST00000555554 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
CASC1-209ENST00000555554 PTPREP23469 700 aa10.51□□□□□ -0.73
CASC1-209ENST00000555554 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
CASC1-209ENST00000555554 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
CASC1-209ENST00000555554 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
CASC1-209ENST00000555554 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
CASC1-209ENST00000555554 DPYSL4O14531 572 aa10.48□□□□□ -0.73
CASC1-209ENST00000555554 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
CASC1-209ENST00000555554 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
CASC1-209ENST00000555554 STAC3Q96MF2 364 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms