RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 POTEEQ6S8J3 1075 aa9.44□□□□□ -0.9
EFCAB11-206ENST00000555430 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
EFCAB11-206ENST00000555430 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.9
EFCAB11-206ENST00000555430 Q6ZNB5 142 aa9.42□□□□□ -0.9
EFCAB11-206ENST00000555430 MICALL2Q8IY33 904 aa9.42□□□□□ -0.9
EFCAB11-206ENST00000555430 A0A0G2JS52 829 aa9.39□□□□□ -0.91
EFCAB11-206ENST00000555430 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
EFCAB11-206ENST00000555430 TK2O00142 265 aa9.35□□□□□ -0.91
EFCAB11-206ENST00000555430 ARHGAP33O14559 1287 aa9.33□□□□□ -0.92
EFCAB11-206ENST00000555430 HRO43593 1189 aa9.33□□□□□ -0.92
EFCAB11-206ENST00000555430 NUDT7P0C024 238 aa9.31□□□□□ -0.92
EFCAB11-206ENST00000555430 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
EFCAB11-206ENST00000555430 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
EFCAB11-206ENST00000555430 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
EFCAB11-206ENST00000555430 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
EFCAB11-206ENST00000555430 PTPN5P54829 565 aa9.25□□□□□ -0.93
EFCAB11-206ENST00000555430 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
EFCAB11-206ENST00000555430 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
EFCAB11-206ENST00000555430 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
EFCAB11-206ENST00000555430 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
EFCAB11-206ENST00000555430 KLHL34Q8N239 644 aa9.18□□□□□ -0.94
EFCAB11-206ENST00000555430 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
EFCAB11-206ENST00000555430 LCE2BO14633 110 aa9.16□□□□□ -0.94
EFCAB11-206ENST00000555430 SOX12O15370 315 aa9.15□□□□□ -0.94
EFCAB11-206ENST00000555430 PSEN2P49810 448 aa9.15□□□□□ -0.94
EFCAB11-206ENST00000555430 MS4A4AQ96JQ5 239 aa9.15□□□□□ -0.94
EFCAB11-206ENST00000555430 SLC34A2O95436 690 aa9.14□□□□□ -0.95
EFCAB11-206ENST00000555430 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
EFCAB11-206ENST00000555430 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
EFCAB11-206ENST00000555430 KIF3CO14782 793 aa9.08□□□□□ -0.96
EFCAB11-206ENST00000555430 PHF8Q9UPP1 1060 aa9.05□□□□□ -0.96
EFCAB11-206ENST00000555430 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
EFCAB11-206ENST00000555430 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
EFCAB11-206ENST00000555430 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
EFCAB11-206ENST00000555430 GFRA3O60609 400 aa9.03□□□□□ -0.96
EFCAB11-206ENST00000555430 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
EFCAB11-206ENST00000555430 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
EFCAB11-206ENST00000555430 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
EFCAB11-206ENST00000555430 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
EFCAB11-206ENST00000555430 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
EFCAB11-206ENST00000555430 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
EFCAB11-206ENST00000555430 WNT2BQ93097 391 aa9□□□□□ -0.97
EFCAB11-206ENST00000555430 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
EFCAB11-206ENST00000555430 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
EFCAB11-206ENST00000555430 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
EFCAB11-206ENST00000555430 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.98
EFCAB11-206ENST00000555430 SPOCK2Q92563 424 aa8.95□□□□□ -0.98
EFCAB11-206ENST00000555430 NRG2O14511 850 aaPredicted RBP8.94□□□□□ -0.98
EFCAB11-206ENST00000555430 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
EFCAB11-206ENST00000555430 NLRP6P59044 892 aa8.92□□□□□ -0.98
EFCAB11-206ENST00000555430 MRPL50Q8N5N7 158 aaKnown RBP8.91□□□□□ -0.98
EFCAB11-206ENST00000555430 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
EFCAB11-206ENST00000555430 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
EFCAB11-206ENST00000555430 TRIM41Q8WV44 630 aa8.88□□□□□ -0.99
EFCAB11-206ENST00000555430 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
EFCAB11-206ENST00000555430 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
EFCAB11-206ENST00000555430 FBXO22Q8NEZ5 403 aa8.87□□□□□ -0.99
EFCAB11-206ENST00000555430 KCNC4Q03721 635 aa8.85□□□□□ -0.99
EFCAB11-206ENST00000555430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.83□□□□□ -1
EFCAB11-206ENST00000555430 ZFP91Q96JP5 570 aaPredicted RBP8.83□□□□□ -1
EFCAB11-206ENST00000555430 NBPF3Q9H094 633 aa8.83□□□□□ -1
EFCAB11-206ENST00000555430 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
EFCAB11-206ENST00000555430 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
EFCAB11-206ENST00000555430 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
EFCAB11-206ENST00000555430 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
EFCAB11-206ENST00000555430 ANKK1Q8NFD2 765 aa8.78□□□□□ -1
EFCAB11-206ENST00000555430 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1.01
EFCAB11-206ENST00000555430 TBC1D12O60347 775 aa8.77□□□□□ -1.01
EFCAB11-206ENST00000555430 PRKD2Q9BZL6 878 aa8.76□□□□□ -1.01
EFCAB11-206ENST00000555430 PTPREP23469 700 aa8.75□□□□□ -1.01
EFCAB11-206ENST00000555430 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
EFCAB11-206ENST00000555430 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
EFCAB11-206ENST00000555430 TREML4Q6UXN2 200 aa8.71□□□□□ -1.02
EFCAB11-206ENST00000555430 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
EFCAB11-206ENST00000555430 BCAMP50895 628 aa8.7□□□□□ -1.02
EFCAB11-206ENST00000555430 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
EFCAB11-206ENST00000555430 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
EFCAB11-206ENST00000555430 SOWAHBA6NEL2 793 aa8.69□□□□□ -1.02
EFCAB11-206ENST00000555430 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
EFCAB11-206ENST00000555430 RNF25Q96BH1 459 aaPredicted RBP8.68□□□□□ -1.02
EFCAB11-206ENST00000555430 WBP1LQ9NX94 342 aa8.66□□□□□ -1.02
EFCAB11-206ENST00000555430 PLPP6Q8IY26 295 aa8.65□□□□□ -1.02
EFCAB11-206ENST00000555430 FOXK1P85037 733 aa8.64□□□□□ -1.03
EFCAB11-206ENST00000555430 FOSBP53539 338 aa8.63□□□□□ -1.03
EFCAB11-206ENST00000555430 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
EFCAB11-206ENST00000555430 RABGEF1Q9UJ41 708 aa8.63□□□□□ -1.03
EFCAB11-206ENST00000555430 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
EFCAB11-206ENST00000555430 POTECB2RU33 542 aa8.58□□□□□ -1.04
EFCAB11-206ENST00000555430 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
EFCAB11-206ENST00000555430 ZFRQ96KR1 1074 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-206ENST00000555430 TAOK2Q9UL54 1235 aa8.56□□□□□ -1.04
EFCAB11-206ENST00000555430 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
EFCAB11-206ENST00000555430 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 GPHNQ9NQX3 736 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-206ENST00000555430 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
EFCAB11-206ENST00000555430 MYT1Q01538 1121 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms