RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
CFAP54-207ENST00000554821 ANKRD13DQ6ZTN6 518 aa10.38□□□□□ -0.75
CFAP54-207ENST00000554821 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
CFAP54-207ENST00000554821 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
CFAP54-207ENST00000554821 SOX12O15370 315 aa10.35□□□□□ -0.75
CFAP54-207ENST00000554821 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
CFAP54-207ENST00000554821 RGL2O15211 777 aa10.34□□□□□ -0.75
CFAP54-207ENST00000554821 STK25O00506 426 aa10.32□□□□□ -0.76
CFAP54-207ENST00000554821 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
CFAP54-207ENST00000554821 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
CFAP54-207ENST00000554821 EFCAB3Q8N7B9 438 aa10.31□□□□□ -0.76
CFAP54-207ENST00000554821 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
CFAP54-207ENST00000554821 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
CFAP54-207ENST00000554821 NLRP6P59044 892 aa10.26□□□□□ -0.77
CFAP54-207ENST00000554821 RGS20O76081 388 aa10.25□□□□□ -0.77
CFAP54-207ENST00000554821 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
CFAP54-207ENST00000554821 HS6ST3Q8IZP7 471 aa10.23□□□□□ -0.77
CFAP54-207ENST00000554821 AMER1Q5JTC6 1135 aaPredicted RBP10.21□□□□□ -0.77
CFAP54-207ENST00000554821 PBX2P40425 430 aa10.2□□□□□ -0.78
CFAP54-207ENST00000554821 ZNF316A6NFI3 1004 aaPredicted RBP10.19□□□□□ -0.78
CFAP54-207ENST00000554821 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
CFAP54-207ENST00000554821 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
CFAP54-207ENST00000554821 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
CFAP54-207ENST00000554821 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
CFAP54-207ENST00000554821 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
CFAP54-207ENST00000554821 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
CFAP54-207ENST00000554821 MFRPQ9BY79 579 aa10.14□□□□□ -0.79
CFAP54-207ENST00000554821 ARSIQ5FYB1 569 aa10.12□□□□□ -0.79
CFAP54-207ENST00000554821 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
CFAP54-207ENST00000554821 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
CFAP54-207ENST00000554821 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
CFAP54-207ENST00000554821 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
CFAP54-207ENST00000554821 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
CFAP54-207ENST00000554821 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
CFAP54-207ENST00000554821 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.81
CFAP54-207ENST00000554821 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
CFAP54-207ENST00000554821 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
CFAP54-207ENST00000554821 A0A0G2JS52 829 aa9.96□□□□□ -0.82
CFAP54-207ENST00000554821 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
CFAP54-207ENST00000554821 TK2O00142 265 aa9.95□□□□□ -0.82
CFAP54-207ENST00000554821 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
CFAP54-207ENST00000554821 HRO43593 1189 aa9.94□□□□□ -0.82
CFAP54-207ENST00000554821 Q6ZNB5 142 aa9.93□□□□□ -0.82
CFAP54-207ENST00000554821 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
CFAP54-207ENST00000554821 PPP1R37O75864 691 aa9.92□□□□□ -0.82
CFAP54-207ENST00000554821 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
CFAP54-207ENST00000554821 KIF3CO14782 793 aa9.91□□□□□ -0.82
CFAP54-207ENST00000554821 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
CFAP54-207ENST00000554821 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
CFAP54-207ENST00000554821 NUDT7P0C024 238 aa9.89□□□□□ -0.83
CFAP54-207ENST00000554821 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
CFAP54-207ENST00000554821 GTPBP6O43824 516 aaPredicted RBP9.88□□□□□ -0.83
CFAP54-207ENST00000554821 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.87□□□□□ -0.83
CFAP54-207ENST00000554821 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
CFAP54-207ENST00000554821 SLC34A2O95436 690 aa9.84□□□□□ -0.83
CFAP54-207ENST00000554821 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
CFAP54-207ENST00000554821 FOXK1P85037 733 aa9.82□□□□□ -0.84
CFAP54-207ENST00000554821 PDE4AP27815 886 aa9.8□□□□□ -0.84
CFAP54-207ENST00000554821 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
CFAP54-207ENST00000554821 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
CFAP54-207ENST00000554821 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
CFAP54-207ENST00000554821 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
CFAP54-207ENST00000554821 PTPN5P54829 565 aa9.77□□□□□ -0.85
CFAP54-207ENST00000554821 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
CFAP54-207ENST00000554821 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
CFAP54-207ENST00000554821 TBC1D12O60347 775 aa9.75□□□□□ -0.85
CFAP54-207ENST00000554821 LAPTM4AQ15012 233 aa9.75□□□□□ -0.85
CFAP54-207ENST00000554821 DSG2Q14126 1118 aa9.73□□□□□ -0.85
CFAP54-207ENST00000554821 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
CFAP54-207ENST00000554821 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
CFAP54-207ENST00000554821 LCE2BO14633 110 aa9.71□□□□□ -0.86
CFAP54-207ENST00000554821 PSEN2P49810 448 aa9.71□□□□□ -0.86
CFAP54-207ENST00000554821 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
CFAP54-207ENST00000554821 MFSD10Q14728 455 aa9.7□□□□□ -0.86
CFAP54-207ENST00000554821 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
CFAP54-207ENST00000554821 TRAF7Q6Q0C0 670 aa9.69□□□□□ -0.86
CFAP54-207ENST00000554821 THSD4Q6ZMP0 1018 aa9.68□□□□□ -0.86
CFAP54-207ENST00000554821 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
CFAP54-207ENST00000554821 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
CFAP54-207ENST00000554821 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
CFAP54-207ENST00000554821 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
CFAP54-207ENST00000554821 KDM4FA0A1W2PPD8 638 aa9.62□□□□□ -0.87
CFAP54-207ENST00000554821 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
CFAP54-207ENST00000554821 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
CFAP54-207ENST00000554821 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
CFAP54-207ENST00000554821 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
CFAP54-207ENST00000554821 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
CFAP54-207ENST00000554821 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
CFAP54-207ENST00000554821 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
CFAP54-207ENST00000554821 SLC4A5Q9BY07 1137 aa9.56□□□□□ -0.88
CFAP54-207ENST00000554821 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
CFAP54-207ENST00000554821 WNT2BQ93097 391 aa9.54□□□□□ -0.88
CFAP54-207ENST00000554821 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CFAP54-207ENST00000554821 WDR70Q9NW82 654 aa9.54□□□□□ -0.88
CFAP54-207ENST00000554821 GFRA3O60609 400 aa9.53□□□□□ -0.88
CFAP54-207ENST00000554821 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
CFAP54-207ENST00000554821 BHMG1C9JSJ3 638 aaPredicted RBP9.52□□□□□ -0.89
CFAP54-207ENST00000554821 EVI5O60447 810 aa9.52□□□□□ -0.89
CFAP54-207ENST00000554821 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.89
CFAP54-207ENST00000554821 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms