RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 RNF25Q96BH1 459 aaPredicted RBP6.77□□□□□ -1.33
IFT43-208ENST00000554423 ZFP91Q96JP5 570 aaPredicted RBP6.77□□□□□ -1.33
IFT43-208ENST00000554423 BOLA1Q9Y3E2 137 aa6.77□□□□□ -1.33
IFT43-208ENST00000554423 STK25O00506 426 aa6.76□□□□□ -1.33
IFT43-208ENST00000554423 DPY19L2Q6NUT2 758 aa6.76□□□□□ -1.33
IFT43-208ENST00000554423 CABP2Q9NPB3 220 aa6.76□□□□□ -1.33
IFT43-208ENST00000554423 DCAF8L2P0C7V8 631 aa6.75□□□□□ -1.33
IFT43-208ENST00000554423 STK24Q9Y6E0 443 aa6.75□□□□□ -1.33
IFT43-208ENST00000554423 SOX12O15370 315 aa6.74□□□□□ -1.33
IFT43-208ENST00000554423 BCL11BQ9C0K0 894 aaPredicted RBP6.74□□□□□ -1.33
IFT43-208ENST00000554423 LSM11P83369 360 aaKnown RBP eCLIP6.73□□□□□ -1.33
IFT43-208ENST00000554423 IRX2Q9BZI1 471 aaPredicted RBP6.73□□□□□ -1.33
IFT43-208ENST00000554423 ZSWIM6Q9HCJ5 1215 aa6.73□□□□□ -1.33
IFT43-208ENST00000554423 CHGAP10645 457 aaKnown RBP6.71□□□□□ -1.34
IFT43-208ENST00000554423 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.34
IFT43-208ENST00000554423 NLRP6P59044 892 aa6.7□□□□□ -1.34
IFT43-208ENST00000554423 HS6ST3Q8IZP7 471 aa6.7□□□□□ -1.34
IFT43-208ENST00000554423 EFCAB3Q8N7B9 438 aa6.7□□□□□ -1.34
IFT43-208ENST00000554423 RYDENQ9NUL5 291 aaKnown RBP6.7□□□□□ -1.34
IFT43-208ENST00000554423 ILDR1Q86SU0 546 aaPredicted RBP6.69□□□□□ -1.34
IFT43-208ENST00000554423 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
IFT43-208ENST00000554423 ZNF316A6NFI3 1004 aaPredicted RBP6.63□□□□□ -1.35
IFT43-208ENST00000554423 RGS20O76081 388 aa6.63□□□□□ -1.35
IFT43-208ENST00000554423 ARSIQ5FYB1 569 aa6.63□□□□□ -1.35
IFT43-208ENST00000554423 DNAJC5Q9H3Z4 198 aa6.63□□□□□ -1.35
IFT43-208ENST00000554423 PHF8Q9UPP1 1060 aa6.62□□□□□ -1.35
IFT43-208ENST00000554423 PBX2P40425 430 aa6.6□□□□□ -1.35
IFT43-208ENST00000554423 BBXQ8WY36 941 aaPredicted RBP6.6□□□□□ -1.35
IFT43-208ENST00000554423 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.6□□□□□ -1.35
IFT43-208ENST00000554423 MFRPQ9BY79 579 aa6.59□□□□□ -1.35
IFT43-208ENST00000554423 AXIN2Q9Y2T1 843 aa6.58□□□□□ -1.36
IFT43-208ENST00000554423 Q6ZNB5 142 aa6.57□□□□□ -1.36
IFT43-208ENST00000554423 FBXO22Q8NEZ5 403 aa6.57□□□□□ -1.36
IFT43-208ENST00000554423 KHSRPQ92945 711 aaKnown RBP eCLIP6.57□□□□□ -1.36
IFT43-208ENST00000554423 TMEM92Q6UXU6 159 aa6.55□□□□□ -1.36
IFT43-208ENST00000554423 MS4A4AQ96JQ5 239 aa6.55□□□□□ -1.36
IFT43-208ENST00000554423 ADGRD1Q6QNK2 874 aa6.54□□□□□ -1.36
IFT43-208ENST00000554423 MICALL2Q8IY33 904 aa6.53□□□□□ -1.36
IFT43-208ENST00000554423 KCTD12Q96CX2 325 aaKnown RBP6.53□□□□□ -1.36
IFT43-208ENST00000554423 NKX1-1Q15270 411 aaPredicted RBP6.52□□□□□ -1.37
IFT43-208ENST00000554423 SPRYD3Q8NCJ5 442 aa6.52□□□□□ -1.37
IFT43-208ENST00000554423 POTEEQ6S8J3 1075 aa6.51□□□□□ -1.37
IFT43-208ENST00000554423 STAC3Q96MF2 364 aa6.51□□□□□ -1.37
IFT43-208ENST00000554423 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
IFT43-208ENST00000554423 TMC2Q8TDI7 906 aa6.49□□□□□ -1.37
IFT43-208ENST00000554423 A0A0G2JS52 829 aa6.48□□□□□ -1.37
IFT43-208ENST00000554423 PPP1R37O75864 691 aa6.47□□□□□ -1.37
IFT43-208ENST00000554423 NUDT7P0C024 238 aa6.47□□□□□ -1.37
IFT43-208ENST00000554423 PTPN5P54829 565 aa6.47□□□□□ -1.37
IFT43-208ENST00000554423 ARHGAP33O14559 1287 aa6.46□□□□□ -1.38
IFT43-208ENST00000554423 IFFO2Q5TF58 517 aa6.46□□□□□ -1.38
IFT43-208ENST00000554423 PAXIP1Q6ZW49 1069 aaPredicted RBP6.46□□□□□ -1.38
IFT43-208ENST00000554423 LHX6Q9UPM6 363 aa6.46□□□□□ -1.38
IFT43-208ENST00000554423 CFAP44Q96MT7 982 aa6.45□□□□□ -1.38
IFT43-208ENST00000554423 PDE4AP27815 886 aa6.44□□□□□ -1.38
IFT43-208ENST00000554423 TK2O00142 265 aa6.43□□□□□ -1.38
IFT43-208ENST00000554423 HRO43593 1189 aa6.42□□□□□ -1.38
IFT43-208ENST00000554423 GPHNQ9NQX3 736 aaPredicted RBP6.41□□□□□ -1.38
IFT43-208ENST00000554423 C2orf72A6NCS6 295 aa6.4□□□□□ -1.38
IFT43-208ENST00000554423 KIF3CO14782 793 aa6.38□□□□□ -1.39
IFT43-208ENST00000554423 TBC1D12O60347 775 aa6.38□□□□□ -1.39
IFT43-208ENST00000554423 FOXK1P85037 733 aa6.38□□□□□ -1.39
IFT43-208ENST00000554423 DMRTA1Q5VZB9 504 aa6.38□□□□□ -1.39
IFT43-208ENST00000554423 PSDA5PKW4 1024 aaPredicted RBP6.37□□□□□ -1.39
IFT43-208ENST00000554423 LARP6Q9BRS8 491 aaKnown RBP6.37□□□□□ -1.39
IFT43-208ENST00000554423 PSEN2P49810 448 aa6.36□□□□□ -1.39
IFT43-208ENST00000554423 TRAF7Q6Q0C0 670 aa6.36□□□□□ -1.39
IFT43-208ENST00000554423 CRISPLD2Q9H0B8 497 aa6.36□□□□□ -1.39
IFT43-208ENST00000554423 WDR70Q9NW82 654 aa6.36□□□□□ -1.39
IFT43-208ENST00000554423 SLC34A2O95436 690 aa6.35□□□□□ -1.39
IFT43-208ENST00000554423 LAPTM4AQ15012 233 aa6.35□□□□□ -1.39
IFT43-208ENST00000554423 PLPP6Q8IY26 295 aa6.35□□□□□ -1.39
IFT43-208ENST00000554423 DDX27Q96GQ7 796 aaKnown RBP6.35□□□□□ -1.39
IFT43-208ENST00000554423 PCDHGA4Q9Y5G9 962 aa6.35□□□□□ -1.39
IFT43-208ENST00000554423 PLCB2Q00722 1185 aa6.34□□□□□ -1.39
IFT43-208ENST00000554423 PPP1R15BQ5SWA1 713 aa6.34□□□□□ -1.39
IFT43-208ENST00000554423 DSG2Q14126 1118 aa6.33□□□□□ -1.4
IFT43-208ENST00000554423 NCKAP5LQ9HCH0 1330 aa6.31□□□□□ -1.4
IFT43-208ENST00000554423 MFSD10Q14728 455 aa6.31□□□□□ -1.4
IFT43-208ENST00000554423 KCNH8Q96L42 1107 aa6.31□□□□□ -1.4
IFT43-208ENST00000554423 GOLGA8CPA6NN73 597 aa6.3□□□□□ -1.4
IFT43-208ENST00000554423 THSD4Q6ZMP0 1018 aa6.3□□□□□ -1.4
IFT43-208ENST00000554423 PTCD2Q8WV60 388 aaKnown RBP6.3□□□□□ -1.4
IFT43-208ENST00000554423 LCE2BO14633 110 aa6.29□□□□□ -1.4
IFT43-208ENST00000554423 ZNF787Q6DD87 383 aa6.29□□□□□ -1.4
IFT43-208ENST00000554423 CADPS2Q86UW7 1296 aa6.29□□□□□ -1.4
IFT43-208ENST00000554423 GFRA3O60609 400 aa6.28□□□□□ -1.4
IFT43-208ENST00000554423 MAP3K9P80192 1104 aa6.27□□□□□ -1.41
IFT43-208ENST00000554423 PPP4R3BQ5MIZ7 849 aa6.27□□□□□ -1.41
IFT43-208ENST00000554423 TSHZ2Q9NRE2 1034 aa6.27□□□□□ -1.41
IFT43-208ENST00000554423 HAP1P54257 671 aaPredicted RBP6.26□□□□□ -1.41
IFT43-208ENST00000554423 WNT2BQ93097 391 aa6.26□□□□□ -1.41
IFT43-208ENST00000554423 KCNK17Q96T54 332 aa6.26□□□□□ -1.41
IFT43-208ENST00000554423 VPS9D1Q9Y2B5 631 aa6.26□□□□□ -1.41
IFT43-208ENST00000554423 E2F4Q16254 413 aa6.25□□□□□ -1.41
IFT43-208ENST00000554423 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
IFT43-208ENST00000554423 ZNF775Q96BV0 537 aaPredicted RBP6.25□□□□□ -1.41
IFT43-208ENST00000554423 UPF1Q92900 1129 aaKnown RBP eCLIP6.24□□□□□ -1.41
IFT43-208ENST00000554423 CAMK2BQ13554 666 aa6.23□□□□□ -1.41
IFT43-208ENST00000554423 P3H3Q8IVL6 736 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms