RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.061e-8■□□□□ 10.2
LINC01578-202ENST00000554133 VASPP50552 380 aaPredicted RBP8.4□□□□□ -1.07
LINC01578-202ENST00000554133 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.07
LINC01578-202ENST00000554133 AXIN2Q9Y2T1 843 aa8.38□□□□□ -1.07
LINC01578-202ENST00000554133 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
LINC01578-202ENST00000554133 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
LINC01578-202ENST00000554133 SOX12O15370 315 aa8.36□□□□□ -1.07
LINC01578-202ENST00000554133 RGS20O76081 388 aa8.36□□□□□ -1.07
LINC01578-202ENST00000554133 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
LINC01578-202ENST00000554133 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
LINC01578-202ENST00000554133 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
LINC01578-202ENST00000554133 NUDT7P0C024 238 aa8.33□□□□□ -1.08
LINC01578-202ENST00000554133 AMER1Q5JTC6 1135 aaPredicted RBP8.33□□□□□ -1.08
LINC01578-202ENST00000554133 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
LINC01578-202ENST00000554133 LHX6Q9UPM6 363 aa8.33□□□□□ -1.08
LINC01578-202ENST00000554133 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
LINC01578-202ENST00000554133 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
LINC01578-202ENST00000554133 RTN4Q9NQC3 1192 aaKnown RBP8.29□□□□□ -1.08
LINC01578-202ENST00000554133 TK2O00142 265 aa8.28□□□□□ -1.08
LINC01578-202ENST00000554133 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
LINC01578-202ENST00000554133 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
LINC01578-202ENST00000554133 STAC3Q96MF2 364 aa8.26□□□□□ -1.09
LINC01578-202ENST00000554133 PCDHGA4Q9Y5G9 962 aa8.26□□□□□ -1.09
LINC01578-202ENST00000554133 TRIM41Q8WV44 630 aa8.25□□□□□ -1.09
LINC01578-202ENST00000554133 HRO43593 1189 aa8.25□□□□□ -1.09
LINC01578-202ENST00000554133 PSDA5PKW4 1024 aaPredicted RBP8.23□□□□□ -1.09
LINC01578-202ENST00000554133 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
LINC01578-202ENST00000554133 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
LINC01578-202ENST00000554133 SLC34A2O95436 690 aa8.22□□□□□ -1.09
LINC01578-202ENST00000554133 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
LINC01578-202ENST00000554133 C2orf72A6NCS6 295 aa8.2□□□□□ -1.1
LINC01578-202ENST00000554133 KIF3CO14782 793 aa8.2□□□□□ -1.1
LINC01578-202ENST00000554133 NLRP6P59044 892 aa8.2□□□□□ -1.1
LINC01578-202ENST00000554133 A0A0G2JS52 829 aa8.19□□□□□ -1.1
LINC01578-202ENST00000554133 PTPN5P54829 565 aa8.18□□□□□ -1.1
LINC01578-202ENST00000554133 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
LINC01578-202ENST00000554133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.17□□□□□ -1.1
LINC01578-202ENST00000554133 PSEN2P49810 448 aa8.17□□□□□ -1.1
LINC01578-202ENST00000554133 ZFP91Q96JP5 570 aaPredicted RBP8.17□□□□□ -1.1
LINC01578-202ENST00000554133 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.11
LINC01578-202ENST00000554133 VGFO15240 615 aaPredicted RBP8.14□□□□□ -1.11
LINC01578-202ENST00000554133 Q6ZNB5 142 aa8.13□□□□□ -1.11
LINC01578-202ENST00000554133 FBXO22Q8NEZ5 403 aa8.12□□□□□ -1.11
LINC01578-202ENST00000554133 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
LINC01578-202ENST00000554133 TMC2Q8TDI7 906 aa8.1□□□□□ -1.11
LINC01578-202ENST00000554133 KCNH8Q96L42 1107 aa8.09□□□□□ -1.11
LINC01578-202ENST00000554133 KDM4FA0A1W2PPD8 638 aa8.08□□□□□ -1.12
LINC01578-202ENST00000554133 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
LINC01578-202ENST00000554133 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
LINC01578-202ENST00000554133 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
LINC01578-202ENST00000554133 RNF25Q96BH1 459 aaPredicted RBP8.05□□□□□ -1.12
LINC01578-202ENST00000554133 GOLGA8CPA6NN73 597 aa8.04□□□□□ -1.12
LINC01578-202ENST00000554133 PTCD2Q8WV60 388 aaKnown RBP8.03□□□□□ -1.12
LINC01578-202ENST00000554133 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
LINC01578-202ENST00000554133 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
LINC01578-202ENST00000554133 WNT2BQ93097 391 aa8□□□□□ -1.13
LINC01578-202ENST00000554133 BCL11BQ9C0K0 894 aaPredicted RBP8□□□□□ -1.13
LINC01578-202ENST00000554133 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
LINC01578-202ENST00000554133 TBC1D12O60347 775 aa7.99□□□□□ -1.13
LINC01578-202ENST00000554133 STK24Q9Y6E0 443 aa7.99□□□□□ -1.13
LINC01578-202ENST00000554133 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
LINC01578-202ENST00000554133 BHMG1C9JSJ3 638 aaPredicted RBP7.97□□□□□ -1.13
LINC01578-202ENST00000554133 TRAF7Q6Q0C0 670 aa7.96□□□□□ -1.14
LINC01578-202ENST00000554133 MRPL50Q8N5N7 158 aaKnown RBP7.95□□□□□ -1.14
LINC01578-202ENST00000554133 ITGBL1O95965 494 aaPredicted RBP7.93□□□□□ -1.14
LINC01578-202ENST00000554133 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
LINC01578-202ENST00000554133 BCL2L12Q9HB09 334 aa7.91□□□□□ -1.14
LINC01578-202ENST00000554133 LCE2BO14633 110 aa7.9□□□□□ -1.14
LINC01578-202ENST00000554133 GFRA3O60609 400 aa7.89□□□□□ -1.15
LINC01578-202ENST00000554133 FOXK1P85037 733 aa7.89□□□□□ -1.15
LINC01578-202ENST00000554133 ZBED2Q9BTP6 218 aa7.89□□□□□ -1.15
LINC01578-202ENST00000554133 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
LINC01578-202ENST00000554133 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
LINC01578-202ENST00000554133 PTPREP23469 700 aa7.88□□□□□ -1.15
LINC01578-202ENST00000554133 STK25O00506 426 aa7.87□□□□□ -1.15
LINC01578-202ENST00000554133 KCNC4Q03721 635 aa7.85□□□□□ -1.15
LINC01578-202ENST00000554133 PPP1R37O75864 691 aa7.84□□□□□ -1.15
LINC01578-202ENST00000554133 ANKK1Q8NFD2 765 aa7.84□□□□□ -1.15
LINC01578-202ENST00000554133 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
LINC01578-202ENST00000554133 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
LINC01578-202ENST00000554133 FOSBP53539 338 aa7.82□□□□□ -1.16
LINC01578-202ENST00000554133 DSG2Q14126 1118 aa7.82□□□□□ -1.16
LINC01578-202ENST00000554133 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
LINC01578-202ENST00000554133 NRG2O14511 850 aaPredicted RBP7.8□□□□□ -1.16
LINC01578-202ENST00000554133 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
LINC01578-202ENST00000554133 BCAMP50895 628 aa7.78□□□□□ -1.16
LINC01578-202ENST00000554133 UPF1Q92900 1129 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01578-202ENST00000554133 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
LINC01578-202ENST00000554133 SOWAHBA6NEL2 793 aa7.76□□□□□ -1.17
LINC01578-202ENST00000554133 ZDHHC16Q969W1 377 aa7.76□□□□□ -1.17
LINC01578-202ENST00000554133 RABGEF1Q9UJ41 708 aa7.76□□□□□ -1.17
LINC01578-202ENST00000554133 LAPTM4BQ86VI4 370 aa7.74□□□□□ -1.17
LINC01578-202ENST00000554133 JPH4Q96JJ6 628 aa7.74□□□□□ -1.17
LINC01578-202ENST00000554133 ADAM33Q9BZ11 813 aa7.74□□□□□ -1.17
LINC01578-202ENST00000554133 WBP1LQ9NX94 342 aa7.73□□□□□ -1.17
LINC01578-202ENST00000554133 PRKD2Q9BZL6 878 aa7.72□□□□□ -1.17
LINC01578-202ENST00000554133 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
LINC01578-202ENST00000554133 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
LINC01578-202ENST00000554133 ZFRQ96KR1 1074 aaKnown RBP7.69□□□□□ -1.18
LINC01578-202ENST00000554133 PROX2Q3B8N5 592 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms