RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MS4A4AQ96JQ5 239 aa7.95□□□□□ -1.14
TDP1-207ENST00000553617 TTLL13PA6NNM8 815 aa7.94□□□□□ -1.14
TDP1-207ENST00000553617 MFSD10Q14728 455 aa7.94□□□□□ -1.14
TDP1-207ENST00000553617 ZC3H15Q8WU90 426 aaKnown RBP7.94□□□□□ -1.14
TDP1-207ENST00000553617 SEMA3EO15041 775 aa7.93□□□□□ -1.14
TDP1-207ENST00000553617 SCUBE2Q9NQ36 999 aa7.93□□□□□ -1.14
TDP1-207ENST00000553617 BRPF1P55201 1214 aaPredicted RBP7.92□□□□□ -1.14
TDP1-207ENST00000553617 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
TDP1-207ENST00000553617 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
TDP1-207ENST00000553617 ERICH6Q7L0X2 663 aa7.91□□□□□ -1.14
TDP1-207ENST00000553617 COLQQ9Y215 455 aaPredicted RBP7.9□□□□□ -1.14
TDP1-207ENST00000553617 PDE4AP27815 886 aa7.89□□□□□ -1.15
TDP1-207ENST00000553617 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
TDP1-207ENST00000553617 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
TDP1-207ENST00000553617 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
TDP1-207ENST00000553617 IER5LQ5T953 404 aa7.88□□□□□ -1.15
TDP1-207ENST00000553617 TRIM35Q9UPQ4 493 aa7.88□□□□□ -1.15
TDP1-207ENST00000553617 SEC24BO95487 1268 aa7.87□□□□□ -1.15
TDP1-207ENST00000553617 TMEM106CQ9BVX2 250 aa7.87□□□□□ -1.15
TDP1-207ENST00000553617 DDX27Q96GQ7 796 aaKnown RBP7.86□□□□□ -1.15
TDP1-207ENST00000553617 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
TDP1-207ENST00000553617 ZMYND10O75800 440 aa7.85□□□□□ -1.15
TDP1-207ENST00000553617 FAM163AQ96GL9 167 aaPredicted RBP7.85□□□□□ -1.15
TDP1-207ENST00000553617 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
TDP1-207ENST00000553617 SMYD5Q6GMV2 418 aa7.83□□□□□ -1.16
TDP1-207ENST00000553617 ILDR1Q86SU0 546 aaPredicted RBP7.83□□□□□ -1.16
TDP1-207ENST00000553617 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
TDP1-207ENST00000553617 GOLGA2Q08379 1002 aa7.8□□□□□ -1.16
TDP1-207ENST00000553617 BARGINQ6ZT62 677 aa7.8□□□□□ -1.16
TDP1-207ENST00000553617 MKRN3Q13064 507 aaKnown RBP7.78□□□□□ -1.16
TDP1-207ENST00000553617 PLCG2P16885 1265 aa7.77□□□□□ -1.17
TDP1-207ENST00000553617 IRX5P78411 483 aaPredicted RBP7.77□□□□□ -1.17
TDP1-207ENST00000553617 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
TDP1-207ENST00000553617 MLLT3P42568 568 aaPredicted RBP7.76□□□□□ -1.17
TDP1-207ENST00000553617 PPP1R15BQ5SWA1 713 aa7.76□□□□□ -1.17
TDP1-207ENST00000553617 GPHNQ9NQX3 736 aaPredicted RBP7.76□□□□□ -1.17
TDP1-207ENST00000553617 DPY19L2Q6NUT2 758 aa7.75□□□□□ -1.17
TDP1-207ENST00000553617 RBM26Q5T8P6 1007 aaKnown RBP7.74□□□□□ -1.17
TDP1-207ENST00000553617 SLAIN1Q8ND83 568 aa7.74□□□□□ -1.17
TDP1-207ENST00000553617 ARXQ96QS3 562 aa7.74□□□□□ -1.17
TDP1-207ENST00000553617 OCEL1Q9H607 264 aa7.73□□□□□ -1.17
TDP1-207ENST00000553617 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
TDP1-207ENST00000553617 PDIA6Q15084 440 aa7.72□□□□□ -1.17
TDP1-207ENST00000553617 GPIHBP1Q8IV16 184 aa7.72□□□□□ -1.17
TDP1-207ENST00000553617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.72□□□□□ -1.177e-6■■□□□ 12.8
TDP1-207ENST00000553617 AK7Q96M32 723 aa7.71□□□□□ -1.18
TDP1-207ENST00000553617 SPDYE16A6NNV3 312 aaPredicted RBP7.7□□□□□ -1.18
TDP1-207ENST00000553617 DPYSL4O14531 572 aa7.7□□□□□ -1.18
TDP1-207ENST00000553617 DSG2Q14126 1118 aa7.7□□□□□ -1.18
TDP1-207ENST00000553617 FOXK1P85037 733 aa7.69□□□□□ -1.18
TDP1-207ENST00000553617 MICALL2Q8IY33 904 aa7.69□□□□□ -1.18
TDP1-207ENST00000553617 PDCD7Q8N8D1 485 aaKnown RBP7.69□□□□□ -1.18
TDP1-207ENST00000553617 GPR37O15354 613 aa7.68□□□□□ -1.18
TDP1-207ENST00000553617 ST18O60284 1047 aa7.68□□□□□ -1.18
TDP1-207ENST00000553617 CDAN1Q8IWY9 1227 aa7.67□□□□□ -1.18
TDP1-207ENST00000553617 GPBP1L1Q9HC44 474 aaPredicted RBP7.67□□□□□ -1.18
TDP1-207ENST00000553617 TRIM66O15016 1216 aa7.65□□□□□ -1.18
TDP1-207ENST00000553617 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
TDP1-207ENST00000553617 KIF3CO14782 793 aa7.64□□□□□ -1.19
TDP1-207ENST00000553617 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.64□□□□□ -1.19
TDP1-207ENST00000553617 DAXXQ9UER7 740 aaPredicted RBP7.64□□□□□ -1.19
TDP1-207ENST00000553617 PDE4DQ08499 809 aa7.63□□□□□ -1.19
TDP1-207ENST00000553617 KRI1Q8N9T8 703 aaKnown RBP7.63□□□□□ -1.19
TDP1-207ENST00000553617 TMC2Q8TDI7 906 aa7.63□□□□□ -1.19
TDP1-207ENST00000553617 KDM4CQ9H3R0 1056 aa7.63□□□□□ -1.19
TDP1-207ENST00000553617 SNPHO15079 494 aa7.61□□□□□ -1.19
TDP1-207ENST00000553617 PLPP6Q8IY26 295 aa7.61□□□□□ -1.19
TDP1-207ENST00000553617 C2orf72A6NCS6 295 aa7.6□□□□□ -1.19
TDP1-207ENST00000553617 L3MBTL3Q96JM7 780 aaPredicted RBP7.59□□□□□ -1.19
TDP1-207ENST00000553617 HOMEZQ8IX15 550 aa7.58□□□□□ -1.2
TDP1-207ENST00000553617 IL27Q8NEV9 243 aa7.58□□□□□ -1.2
TDP1-207ENST00000553617 BOLA1Q9Y3E2 137 aa7.58□□□□□ -1.2
TDP1-207ENST00000553617 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
TDP1-207ENST00000553617 TMEM92Q6UXU6 159 aa7.57□□□□□ -1.2
TDP1-207ENST00000553617 C3orf67Q6ZVT6 689 aa7.57□□□□□ -1.2
TDP1-207ENST00000553617 OSBPP22059 807 aa7.56□□□□□ -1.2
TDP1-207ENST00000553617 PTGER2P43116 358 aa7.56□□□□□ -1.2
TDP1-207ENST00000553617 MAP2K5Q13163 448 aa7.56□□□□□ -1.2
TDP1-207ENST00000553617 SUPT5HO00267 1087 aaKnown RBP7.55□□□□□ -1.2
TDP1-207ENST00000553617 MAP3K9P80192 1104 aa7.55□□□□□ -1.2
TDP1-207ENST00000553617 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
TDP1-207ENST00000553617 CCDC102AQ96A19 550 aa7.55□□□□□ -1.2
TDP1-207ENST00000553617 GRXCR2A6NFK2 248 aa7.54□□□□□ -1.2
TDP1-207ENST00000553617 AMHR2Q16671 573 aa7.54□□□□□ -1.2
TDP1-207ENST00000553617 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
TDP1-207ENST00000553617 IRF6O14896 467 aa7.53□□□□□ -1.2
TDP1-207ENST00000553617 FAM117AQ9C073 453 aa7.53□□□□□ -1.2
TDP1-207ENST00000553617 PLEKHG3A1L390 1219 aa7.52□□□□□ -1.21
TDP1-207ENST00000553617 NUTM2FA1L443 756 aa7.52□□□□□ -1.21
TDP1-207ENST00000553617 GNPATO15228 680 aa7.52□□□□□ -1.21
TDP1-207ENST00000553617 HIC1Q14526 733 aa7.51□□□□□ -1.21
TDP1-207ENST00000553617 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
TDP1-207ENST00000553617 G3V3G9 751 aa7.5□□□□□ -1.21
TDP1-207ENST00000553617 FCHSD2O94868 740 aa7.5□□□□□ -1.21
TDP1-207ENST00000553617 PRIM1P49642 420 aaKnown RBP7.5□□□□□ -1.21
TDP1-207ENST00000553617 SPNS2Q8IVW8 549 aa7.5□□□□□ -1.21
TDP1-207ENST00000553617 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
TDP1-207ENST00000553617 FECHP22830 423 aa7.49□□□□□ -1.21
TDP1-207ENST00000553617 MMRN1Q13201 1228 aa7.49□□□□□ -1.21
TDP1-207ENST00000553617 DDRGK1Q96HY6 314 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms