RNA–Protein interactions for RNA: ENST00000553360.5

KTN1-209, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 993 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-209ENST00000553360 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
KTN1-209ENST00000553360 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
KTN1-209ENST00000553360 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
KTN1-209ENST00000553360 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
KTN1-209ENST00000553360 PDE4AP27815 886 aa12.71□□□□□ -0.37
KTN1-209ENST00000553360 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
KTN1-209ENST00000553360 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
KTN1-209ENST00000553360 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
KTN1-209ENST00000553360 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
KTN1-209ENST00000553360 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
KTN1-209ENST00000553360 KIF3CO14782 793 aa12.65□□□□□ -0.38
KTN1-209ENST00000553360 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
KTN1-209ENST00000553360 DSG2Q14126 1118 aa12.61□□□□□ -0.39
KTN1-209ENST00000553360 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
KTN1-209ENST00000553360 FOXK1P85037 733 aa12.59□□□□□ -0.39
KTN1-209ENST00000553360 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
KTN1-209ENST00000553360 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
KTN1-209ENST00000553360 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
KTN1-209ENST00000553360 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
KTN1-209ENST00000553360 MFSD10Q14728 455 aa12.57□□□□□ -0.4
KTN1-209ENST00000553360 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
KTN1-209ENST00000553360 SNPHO15079 494 aa12.52□□□□□ -0.41
KTN1-209ENST00000553360 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
KTN1-209ENST00000553360 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
KTN1-209ENST00000553360 E2F4Q16254 413 aa12.48□□□□□ -0.41
KTN1-209ENST00000553360 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
KTN1-209ENST00000553360 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
KTN1-209ENST00000553360 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
KTN1-209ENST00000553360 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
KTN1-209ENST00000553360 SLC34A2O95436 690 aa12.42□□□□□ -0.42
KTN1-209ENST00000553360 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
KTN1-209ENST00000553360 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
KTN1-209ENST00000553360 TBC1D12O60347 775 aa12.4□□□□□ -0.42
KTN1-209ENST00000553360 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
KTN1-209ENST00000553360 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
KTN1-209ENST00000553360 ARSIQ5FYB1 569 aa12.39□□□□□ -0.43
KTN1-209ENST00000553360 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
KTN1-209ENST00000553360 OXER1Q8TDS5 423 aa12.38□□□□□ -0.43
KTN1-209ENST00000553360 ST18O60284 1047 aa12.37□□□□□ -0.43
KTN1-209ENST00000553360 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
KTN1-209ENST00000553360 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
KTN1-209ENST00000553360 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
KTN1-209ENST00000553360 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.432e-8■■■■□ 26.7
KTN1-209ENST00000553360 DPYSL4O14531 572 aa12.35□□□□□ -0.43
KTN1-209ENST00000553360 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
KTN1-209ENST00000553360 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
KTN1-209ENST00000553360 NUDT7P0C024 238 aa12.31□□□□□ -0.44
KTN1-209ENST00000553360 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
KTN1-209ENST00000553360 EVI5O60447 810 aa12.28□□□□□ -0.44
KTN1-209ENST00000553360 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
KTN1-209ENST00000553360 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
KTN1-209ENST00000553360 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
KTN1-209ENST00000553360 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
KTN1-209ENST00000553360 EMP3P54852 163 aa12.24□□□□□ -0.45
KTN1-209ENST00000553360 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
KTN1-209ENST00000553360 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
KTN1-209ENST00000553360 ERBB3P21860 1342 aa12.21□□□□□ -0.45
KTN1-209ENST00000553360 PDIA6Q15084 440 aa12.21□□□□□ -0.45
KTN1-209ENST00000553360 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
KTN1-209ENST00000553360 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
KTN1-209ENST00000553360 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
KTN1-209ENST00000553360 DDX12PQ92771 950 aa12.16□□□□□ -0.46
KTN1-209ENST00000553360 SEMA3EO15041 775 aa12.15□□□□□ -0.46
KTN1-209ENST00000553360 VARS2Q5ST30 1063 aaKnown RBP12.15□□□□□ -0.46
KTN1-209ENST00000553360 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
KTN1-209ENST00000553360 NBR1Q14596 966 aa12.14□□□□□ -0.47
KTN1-209ENST00000553360 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
KTN1-209ENST00000553360 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
KTN1-209ENST00000553360 PTGER2P43116 358 aa12.12□□□□□ -0.47
KTN1-209ENST00000553360 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
KTN1-209ENST00000553360 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
KTN1-209ENST00000553360 POTEMA6NI47 508 aa12.1□□□□□ -0.47
KTN1-209ENST00000553360 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
KTN1-209ENST00000553360 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
KTN1-209ENST00000553360 FOSBP53539 338 aa12.09□□□□□ -0.47
KTN1-209ENST00000553360 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
KTN1-209ENST00000553360 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
KTN1-209ENST00000553360 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
KTN1-209ENST00000553360 PHF14O94880 888 aa12.08□□□□□ -0.48
KTN1-209ENST00000553360 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
KTN1-209ENST00000553360 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
KTN1-209ENST00000553360 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
KTN1-209ENST00000553360 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
KTN1-209ENST00000553360 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
KTN1-209ENST00000553360 EPAS1Q99814 870 aa12.05□□□□□ -0.48
KTN1-209ENST00000553360 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
KTN1-209ENST00000553360 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
KTN1-209ENST00000553360 OSBPP22059 807 aa12.02□□□□□ -0.49
KTN1-209ENST00000553360 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
KTN1-209ENST00000553360 BCANQ96GW7 911 aa12.02□□□□□ -0.49
KTN1-209ENST00000553360 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
KTN1-209ENST00000553360 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
KTN1-209ENST00000553360 MAP3K7O43318 606 aa11.99□□□□□ -0.49
KTN1-209ENST00000553360 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
KTN1-209ENST00000553360 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
KTN1-209ENST00000553360 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
KTN1-209ENST00000553360 CDAN1Q8IWY9 1227 aa11.97□□□□□ -0.49
KTN1-209ENST00000553360 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
KTN1-209ENST00000553360 PTPREP23469 700 aa11.96□□□□□ -0.49
KTN1-209ENST00000553360 KCNK17Q96T54 332 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms