RNA–Protein interactions for RNA: ENST00000552646.1

LRIG3-209, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 2

Gene LRIG3, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-209ENST00000552646 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
LRIG3-209ENST00000552646 SPOCK2Q92563 424 aa7.44□□□□□ -1.22
LRIG3-209ENST00000552646 CIZ1Q9ULV3 898 aaPredicted RBP7.43□□□□□ -1.22
LRIG3-209ENST00000552646 GPR153Q6NV75 609 aa7.41□□□□□ -1.22
LRIG3-209ENST00000552646 TRIM41Q8WV44 630 aa7.41□□□□□ -1.22
LRIG3-209ENST00000552646 EFCAB3Q8N7B9 438 aa7.4□□□□□ -1.22
LRIG3-209ENST00000552646 ACIN1Q9UKV3 1341 aaKnown RBP7.4□□□□□ -1.22
LRIG3-209ENST00000552646 MICALL2Q8IY33 904 aa7.39□□□□□ -1.23
LRIG3-209ENST00000552646 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
LRIG3-209ENST00000552646 SOX12O15370 315 aa7.37□□□□□ -1.23
LRIG3-209ENST00000552646 TMEM92Q6UXU6 159 aa7.36□□□□□ -1.23
LRIG3-209ENST00000552646 IFNLR1Q8IU57 520 aaPredicted RBP7.36□□□□□ -1.23
LRIG3-209ENST00000552646 ZNF316A6NFI3 1004 aaPredicted RBP7.32□□□□□ -1.24
LRIG3-209ENST00000552646 ANKRD13DQ6ZTN6 518 aa7.32□□□□□ -1.24
LRIG3-209ENST00000552646 CENPBP07199 599 aaPredicted RBP7.31□□□□□ -1.24
LRIG3-209ENST00000552646 ARSIQ5FYB1 569 aa7.31□□□□□ -1.24
LRIG3-209ENST00000552646 LSM11P83369 360 aaKnown RBP eCLIP7.3□□□□□ -1.24
LRIG3-209ENST00000552646 SHROOM4Q9ULL8 1493 aa7.3□□□□□ -1.24
LRIG3-209ENST00000552646 PBX2P40425 430 aa7.29□□□□□ -1.24
LRIG3-209ENST00000552646 ZCCHC6Q5VYS8 1495 aaKnown RBP7.29□□□□□ -1.24
LRIG3-209ENST00000552646 MS4A4AQ96JQ5 239 aa7.28□□□□□ -1.24
LRIG3-209ENST00000552646 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
LRIG3-209ENST00000552646 RIOK3O14730 519 aaKnown RBP7.26□□□□□ -1.25
LRIG3-209ENST00000552646 VGFO15240 615 aaPredicted RBP7.25□□□□□ -1.25
LRIG3-209ENST00000552646 PHF8Q9UPP1 1060 aa7.25□□□□□ -1.25
LRIG3-209ENST00000552646 HCSTQ9UBK5 93 aa7.24□□□□□ -1.25
LRIG3-209ENST00000552646 GTF3C3Q9Y5Q9 886 aa7.24□□□□□ -1.25
LRIG3-209ENST00000552646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.23□□□□□ -1.25
LRIG3-209ENST00000552646 NLRP6P59044 892 aa7.23□□□□□ -1.25
LRIG3-209ENST00000552646 ZFP91Q96JP5 570 aaPredicted RBP7.23□□□□□ -1.25
LRIG3-209ENST00000552646 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
LRIG3-209ENST00000552646 KHSRPQ92945 711 aaKnown RBP eCLIP7.22□□□□□ -1.25
LRIG3-209ENST00000552646 KIF3CO14782 793 aa7.19□□□□□ -1.26
LRIG3-209ENST00000552646 SLC34A2O95436 690 aa7.19□□□□□ -1.26
LRIG3-209ENST00000552646 TAOK2Q9UL54 1235 aa7.19□□□□□ -1.26
LRIG3-209ENST00000552646 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
LRIG3-209ENST00000552646 NUDT7P0C024 238 aa7.18□□□□□ -1.26
LRIG3-209ENST00000552646 FBXO22Q8NEZ5 403 aa7.18□□□□□ -1.26
LRIG3-209ENST00000552646 RNF25Q96BH1 459 aaPredicted RBP7.18□□□□□ -1.26
LRIG3-209ENST00000552646 CLSPNQ9HAW4 1339 aa7.18□□□□□ -1.26
LRIG3-209ENST00000552646 PSDA5PKW4 1024 aaPredicted RBP7.17□□□□□ -1.26
LRIG3-209ENST00000552646 POTEEQ6S8J3 1075 aa7.17□□□□□ -1.26
LRIG3-209ENST00000552646 LHX6Q9UPM6 363 aa7.17□□□□□ -1.26
LRIG3-209ENST00000552646 C2orf72A6NCS6 295 aa7.16□□□□□ -1.26
LRIG3-209ENST00000552646 PCDHGA4Q9Y5G9 962 aa7.16□□□□□ -1.26
LRIG3-209ENST00000552646 ARHGAP33O14559 1287 aa7.15□□□□□ -1.26
LRIG3-209ENST00000552646 AXIN2Q9Y2T1 843 aa7.15□□□□□ -1.26
LRIG3-209ENST00000552646 TK2O00142 265 aa7.14□□□□□ -1.27
LRIG3-209ENST00000552646 ADGRD1Q6QNK2 874 aa7.14□□□□□ -1.27
LRIG3-209ENST00000552646 DIEXFQ68CQ4 756 aaKnown RBP7.13□□□□□ -1.27
LRIG3-209ENST00000552646 MFRPQ9BY79 579 aa7.11□□□□□ -1.27
LRIG3-209ENST00000552646 BCL11BQ9C0K0 894 aaPredicted RBP7.11□□□□□ -1.27
LRIG3-209ENST00000552646 TMC2Q8TDI7 906 aa7.1□□□□□ -1.27
LRIG3-209ENST00000552646 HRO43593 1189 aa7.09□□□□□ -1.27
LRIG3-209ENST00000552646 RGS20O76081 388 aa7.09□□□□□ -1.27
LRIG3-209ENST00000552646 BCL11AQ9H165 835 aa7.09□□□□□ -1.27
LRIG3-209ENST00000552646 STK24Q9Y6E0 443 aa7.09□□□□□ -1.27
LRIG3-209ENST00000552646 ANP32EQ9BTT0 268 aa7.08□□□□□ -1.28
LRIG3-209ENST00000552646 KDM4FA0A1W2PPD8 638 aa7.06□□□□□ -1.28
LRIG3-209ENST00000552646 IFFO2Q5TF58 517 aa7.05□□□□□ -1.28
LRIG3-209ENST00000552646 PTCD2Q8WV60 388 aaKnown RBP7.05□□□□□ -1.28
LRIG3-209ENST00000552646 STAC3Q96MF2 364 aa7.05□□□□□ -1.28
LRIG3-209ENST00000552646 STK25O00506 426 aa7.03□□□□□ -1.28
LRIG3-209ENST00000552646 DMRTA1Q5VZB9 504 aa7.03□□□□□ -1.28
LRIG3-209ENST00000552646 KCTD12Q96CX2 325 aaKnown RBP7.03□□□□□ -1.28
LRIG3-209ENST00000552646 PSEN2P49810 448 aa7.02□□□□□ -1.29
LRIG3-209ENST00000552646 PPP4R3BQ5MIZ7 849 aa7.02□□□□□ -1.29
LRIG3-209ENST00000552646 KCNH8Q96L42 1107 aa7.01□□□□□ -1.29
LRIG3-209ENST00000552646 TBC1D12O60347 775 aa7□□□□□ -1.29
LRIG3-209ENST00000552646 CCER1Q8TC90 406 aaPredicted RBP7□□□□□ -1.29
LRIG3-209ENST00000552646 FAM9AQ8IZU1 332 aaPredicted RBP6.99□□□□□ -1.29
LRIG3-209ENST00000552646 FOXK1P85037 733 aa6.98□□□□□ -1.29
LRIG3-209ENST00000552646 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
LRIG3-209ENST00000552646 WRNQ14191 1432 aaPredicted RBP eCLIP6.97□□□□□ -1.29
LRIG3-209ENST00000552646 ERICH6Q7L0X2 663 aa6.97□□□□□ -1.29
LRIG3-209ENST00000552646 SLC4A5Q9BY07 1137 aa6.96□□□□□ -1.3
LRIG3-209ENST00000552646 VPS9D1Q9Y2B5 631 aa6.96□□□□□ -1.3
LRIG3-209ENST00000552646 PLPP6Q8IY26 295 aa6.95□□□□□ -1.3
LRIG3-209ENST00000552646 PTPN5P54829 565 aa6.94□□□□□ -1.3
LRIG3-209ENST00000552646 KCNK17Q96T54 332 aa6.94□□□□□ -1.3
LRIG3-209ENST00000552646 GPHNQ9NQX3 736 aaPredicted RBP6.94□□□□□ -1.3
LRIG3-209ENST00000552646 A0A0G2JS52 829 aa6.93□□□□□ -1.3
LRIG3-209ENST00000552646 PPP1R37O75864 691 aa6.93□□□□□ -1.3
LRIG3-209ENST00000552646 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
LRIG3-209ENST00000552646 ABCC9O60706 1549 aa6.92□□□□□ -1.3
LRIG3-209ENST00000552646 ECM2O94769 699 aaPredicted RBP6.92□□□□□ -1.3
LRIG3-209ENST00000552646 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
LRIG3-209ENST00000552646 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
LRIG3-209ENST00000552646 PRKCSHP14314 528 aaPredicted RBP6.91□□□□□ -1.3
LRIG3-209ENST00000552646 THSD4Q6ZMP0 1018 aa6.91□□□□□ -1.3
LRIG3-209ENST00000552646 BCL2L12Q9HB09 334 aa6.91□□□□□ -1.3
LRIG3-209ENST00000552646 GOLGA8CPA6NN73 597 aa6.89□□□□□ -1.31
LRIG3-209ENST00000552646 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
LRIG3-209ENST00000552646 DSG2Q14126 1118 aa6.88□□□□□ -1.31
LRIG3-209ENST00000552646 PTPREP23469 700 aa6.87□□□□□ -1.31
LRIG3-209ENST00000552646 MRPL50Q8N5N7 158 aaKnown RBP6.87□□□□□ -1.31
LRIG3-209ENST00000552646 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
LRIG3-209ENST00000552646 WNT2BQ93097 391 aa6.87□□□□□ -1.31
LRIG3-209ENST00000552646 RSF1Q96T23 1441 aaPredicted RBP6.86□□□□□ -1.31
LRIG3-209ENST00000552646 ZNF454Q8N9F8 522 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms