RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 MAMSTRQ6ZN01 415 aa15.84■□□□□ 0.13
CHPT1-209ENST00000552329 TMEM92Q6UXU6 159 aa15.83■□□□□ 0.12
CHPT1-209ENST00000552329 SLAIN1Q8ND83 568 aa15.81■□□□□ 0.12
CHPT1-209ENST00000552329 TMC2Q8TDI7 906 aa15.76■□□□□ 0.11
CHPT1-209ENST00000552329 C2orf72A6NCS6 295 aa15.75■□□□□ 0.11
CHPT1-209ENST00000552329 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
CHPT1-209ENST00000552329 LARP6Q9BRS8 491 aaKnown RBP15.71■□□□□ 0.11
CHPT1-209ENST00000552329 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
CHPT1-209ENST00000552329 PDE4AP27815 886 aa15.67■□□□□ 0.1
CHPT1-209ENST00000552329 GPHNQ9NQX3 736 aaPredicted RBP15.67■□□□□ 0.1
CHPT1-209ENST00000552329 KIF3CO14782 793 aa15.65■□□□□ 0.1
CHPT1-209ENST00000552329 DSG2Q14126 1118 aa15.65■□□□□ 0.1
CHPT1-209ENST00000552329 DDX27Q96GQ7 796 aaKnown RBP15.6■□□□□ 0.09
CHPT1-209ENST00000552329 PPP1R15BQ5SWA1 713 aa15.59■□□□□ 0.09
CHPT1-209ENST00000552329 PLPP6Q8IY26 295 aa15.59■□□□□ 0.09
CHPT1-209ENST00000552329 KDM2AQ9Y2K7 1162 aa15.59■□□□□ 0.09
CHPT1-209ENST00000552329 FOXK1P85037 733 aa15.57■□□□□ 0.08
CHPT1-209ENST00000552329 WDR70Q9NW82 654 aa15.57■□□□□ 0.08
CHPT1-209ENST00000552329 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
CHPT1-209ENST00000552329 MFSD10Q14728 455 aa15.52■□□□□ 0.08
CHPT1-209ENST00000552329 HOXB3P14651 431 aaPredicted RBP15.48■□□□□ 0.07
CHPT1-209ENST00000552329 VSIG10Q8N0Z9 540 aa15.48■□□□□ 0.07
CHPT1-209ENST00000552329 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHPT1-209ENST00000552329 FAM163AQ96GL9 167 aaPredicted RBP15.47■□□□□ 0.07
CHPT1-209ENST00000552329 ZNF710Q8N1W2 664 aa15.44■□□□□ 0.06
CHPT1-209ENST00000552329 SNPHO15079 494 aa15.43■□□□□ 0.06
CHPT1-209ENST00000552329 DOK7Q18PE1 504 aa15.43■□□□□ 0.06
CHPT1-209ENST00000552329 E2F4Q16254 413 aa15.41■□□□□ 0.06
CHPT1-209ENST00000552329 EMILIN3Q9NT22 766 aa15.41■□□□□ 0.06
CHPT1-209ENST00000552329 KHSRPQ92945 711 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■■■■□ 21.1
CHPT1-209ENST00000552329 ARSIQ5FYB1 569 aa15.38■□□□□ 0.05
CHPT1-209ENST00000552329 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
CHPT1-209ENST00000552329 ST18O60284 1047 aa15.35■□□□□ 0.05
CHPT1-209ENST00000552329 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
CHPT1-209ENST00000552329 PCDHGA4Q9Y5G9 962 aa15.35■□□□□ 0.05
CHPT1-209ENST00000552329 CAMK2BQ13554 666 aa15.34■□□□□ 0.05
CHPT1-209ENST00000552329 DPYSL4O14531 572 aa15.33■□□□□ 0.04
CHPT1-209ENST00000552329 SLC34A2O95436 690 aa15.32■□□□□ 0.04
CHPT1-209ENST00000552329 OXER1Q8TDS5 423 aa15.32■□□□□ 0.04
CHPT1-209ENST00000552329 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
CHPT1-209ENST00000552329 PTCD2Q8WV60 388 aaKnown RBP15.31■□□□□ 0.04
CHPT1-209ENST00000552329 MARVELD3Q96A59 401 aa15.3■□□□□ 0.04
CHPT1-209ENST00000552329 NUDT7P0C024 238 aa15.29■□□□□ 0.04
CHPT1-209ENST00000552329 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
CHPT1-209ENST00000552329 LCE2DQ5TA82 110 aaPredicted RBP15.28■□□□□ 0.04
CHPT1-209ENST00000552329 TBC1D12O60347 775 aa15.26■□□□□ 0.03
CHPT1-209ENST00000552329 HOXB1P14653 301 aaPredicted RBP15.24■□□□□ 0.03
CHPT1-209ENST00000552329 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
CHPT1-209ENST00000552329 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
CHPT1-209ENST00000552329 EVI5O60447 810 aa15.21■□□□□ 0.03
CHPT1-209ENST00000552329 EMP3P54852 163 aa15.2■□□□□ 0.02
CHPT1-209ENST00000552329 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
CHPT1-209ENST00000552329 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
CHPT1-209ENST00000552329 KDM4FA0A1W2PPD8 638 aa15.13■□□□□ 0.01
CHPT1-209ENST00000552329 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
CHPT1-209ENST00000552329 ERBB3P21860 1342 aa15.13■□□□□ 0.01
CHPT1-209ENST00000552329 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
CHPT1-209ENST00000552329 PDIA6Q15084 440 aa15.11■□□□□ 0.01
CHPT1-209ENST00000552329 DDX12PQ92771 950 aa15.11■□□□□ 0.01
CHPT1-209ENST00000552329 ARIH1Q9Y4X5 557 aaPredicted RBP15.1■□□□□ 0.01
CHPT1-209ENST00000552329 SEMA3EO15041 775 aa15.09■□□□□ 0.01
CHPT1-209ENST00000552329 VARS2Q5ST30 1063 aaKnown RBP15.09■□□□□ 0.01
CHPT1-209ENST00000552329 GRXCR2A6NFK2 248 aa15.06■□□□□ 0
CHPT1-209ENST00000552329 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
CHPT1-209ENST00000552329 ANO8Q9HCE9 1232 aaPredicted RBP15.06■□□□□ 0
CHPT1-209ENST00000552329 POTEB3A0JP26 581 aa15.05■□□□□ -0
CHPT1-209ENST00000552329 POTEBQ6S5H4 581 aa15.05■□□□□ -0
CHPT1-209ENST00000552329 POTEGQ6S5H5 508 aa15.05■□□□□ -0
CHPT1-209ENST00000552329 ZNF454Q8N9F8 522 aa15.05■□□□□ -0
CHPT1-209ENST00000552329 MLLT3P42568 568 aaPredicted RBP15.04■□□□□ -0
CHPT1-209ENST00000552329 POTEMA6NI47 508 aa15.03■□□□□ -0
CHPT1-209ENST00000552329 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
CHPT1-209ENST00000552329 NBR1Q14596 966 aa15□□□□□ -0.01
CHPT1-209ENST00000552329 PCDHGA10Q9Y5H3 936 aa14.98□□□□□ -0.01
CHPT1-209ENST00000552329 FOSBP53539 338 aa14.97□□□□□ -0.01
CHPT1-209ENST00000552329 RBM33Q96EV2 1170 aaKnown RBP14.97□□□□□ -0.01
CHPT1-209ENST00000552329 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
CHPT1-209ENST00000552329 PPP4R3BQ5MIZ7 849 aa14.95□□□□□ -0.02
CHPT1-209ENST00000552329 PTGER2P43116 358 aa14.94□□□□□ -0.02
CHPT1-209ENST00000552329 AXIN2Q9Y2T1 843 aa14.92□□□□□ -0.02
CHPT1-209ENST00000552329 TESPA1A2RU30 521 aaPredicted RBP14.91□□□□□ -0.02
CHPT1-209ENST00000552329 PHF14O94880 888 aa14.91□□□□□ -0.02
CHPT1-209ENST00000552329 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
CHPT1-209ENST00000552329 ZDHHC16Q969W1 377 aa14.91□□□□□ -0.02
CHPT1-209ENST00000552329 ADAM33Q9BZ11 813 aa14.91□□□□□ -0.02
CHPT1-209ENST00000552329 PSDA5PKW4 1024 aaPredicted RBP14.9□□□□□ -0.02
CHPT1-209ENST00000552329 TYW1BQ6NUM6 668 aa14.89□□□□□ -0.03
CHPT1-209ENST00000552329 OSBPP22059 807 aa14.88□□□□□ -0.03
CHPT1-209ENST00000552329 MAP3K7O43318 606 aa14.86□□□□□ -0.03
CHPT1-209ENST00000552329 KCNK17Q96T54 332 aa14.86□□□□□ -0.03
CHPT1-209ENST00000552329 EPAS1Q99814 870 aa14.86□□□□□ -0.03
CHPT1-209ENST00000552329 PSEN2P49810 448 aa14.85□□□□□ -0.03
CHPT1-209ENST00000552329 ZNF687Q8N1G0 1237 aa14.85□□□□□ -0.03
CHPT1-209ENST00000552329 TSR1Q2NL82 804 aaKnown RBP14.84□□□□□ -0.03
CHPT1-209ENST00000552329 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
CHPT1-209ENST00000552329 POTEEQ6S8J3 1075 aa14.84□□□□□ -0.03
CHPT1-209ENST00000552329 CDAN1Q8IWY9 1227 aa14.84□□□□□ -0.03
CHPT1-209ENST00000552329 FBXW7Q969H0 707 aa14.83□□□□□ -0.04
CHPT1-209ENST00000552329 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
CHPT1-209ENST00000552329 BCANQ96GW7 911 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms