RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
PFDN5-213ENST00000550964 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.11
PFDN5-213ENST00000550964 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.1
PFDN5-213ENST00000550964 DENND4BO75064 1496 aaPredicted RBP15.71■□□□□ 0.1
PFDN5-213ENST00000550964 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
PFDN5-213ENST00000550964 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
PFDN5-213ENST00000550964 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
PFDN5-213ENST00000550964 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
PFDN5-213ENST00000550964 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
PFDN5-213ENST00000550964 RICTORQ6R327 1708 aa15.65■□□□□ 0.1
PFDN5-213ENST00000550964 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
PFDN5-213ENST00000550964 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
PFDN5-213ENST00000550964 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
PFDN5-213ENST00000550964 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
PFDN5-213ENST00000550964 GPATCH8Q9UKJ3 1502 aaKnown RBP15.63■□□□□ 0.09
PFDN5-213ENST00000550964 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
PFDN5-213ENST00000550964 ZMYM4Q5VZL5 1548 aa15.62■□□□□ 0.09
PFDN5-213ENST00000550964 KIAA1107Q9UPP5 1409 aa15.61■□□□□ 0.09
PFDN5-213ENST00000550964 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
PFDN5-213ENST00000550964 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
PFDN5-213ENST00000550964 RAPGEF3O95398 923 aa15.6■□□□□ 0.09
PFDN5-213ENST00000550964 ABCC1P33527 1531 aa15.59■□□□□ 0.09
PFDN5-213ENST00000550964 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
PFDN5-213ENST00000550964 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
PFDN5-213ENST00000550964 MIA2Q96PC5 1412 aa15.57■□□□□ 0.08
PFDN5-213ENST00000550964 ZFYVE16Q7Z3T8 1539 aa15.56■□□□□ 0.08
PFDN5-213ENST00000550964 KDM5CP41229 1560 aa15.56■□□□□ 0.08
PFDN5-213ENST00000550964 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
PFDN5-213ENST00000550964 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
PFDN5-213ENST00000550964 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
PFDN5-213ENST00000550964 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
PFDN5-213ENST00000550964 MLH3Q9UHC1 1453 aa15.54■□□□□ 0.08
PFDN5-213ENST00000550964 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
PFDN5-213ENST00000550964 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.08
PFDN5-213ENST00000550964 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
PFDN5-213ENST00000550964 ATP10AO60312 1499 aa15.51■□□□□ 0.07
PFDN5-213ENST00000550964 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
PFDN5-213ENST00000550964 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
PFDN5-213ENST00000550964 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
PFDN5-213ENST00000550964 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
PFDN5-213ENST00000550964 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
PFDN5-213ENST00000550964 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
PFDN5-213ENST00000550964 CAMSAP2Q08AD1 1489 aa15.48■□□□□ 0.07
PFDN5-213ENST00000550964 HNRNPMP52272 730 aaKnown RBP eCLIP15.48■□□□□ 0.07
PFDN5-213ENST00000550964 RTEL1-TNFRSF6BF6WH68 1400 aa15.48■□□□□ 0.07
PFDN5-213ENST00000550964 C9orf84Q5VXU9 1444 aa15.48■□□□□ 0.07
PFDN5-213ENST00000550964 REREQ9P2R6 1566 aa15.48■□□□□ 0.07
PFDN5-213ENST00000550964 TRAPPC8Q9Y2L5 1435 aa15.47■□□□□ 0.07
PFDN5-213ENST00000550964 ARHGEF12Q9NZN5 1544 aa15.47■□□□□ 0.07
PFDN5-213ENST00000550964 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
PFDN5-213ENST00000550964 ADGBQ8N7X0 1667 aa15.46■□□□□ 0.07
PFDN5-213ENST00000550964 KIDINS220Q9ULH0 1771 aa15.46■□□□□ 0.07
PFDN5-213ENST00000550964 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
PFDN5-213ENST00000550964 MBD5Q9P267 1494 aa15.44■□□□□ 0.06
PFDN5-213ENST00000550964 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
PFDN5-213ENST00000550964 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
PFDN5-213ENST00000550964 INO80Q9ULG1 1556 aaPredicted RBP15.43■□□□□ 0.06
PFDN5-213ENST00000550964 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
PFDN5-213ENST00000550964 YEATS2Q9ULM3 1422 aa15.43■□□□□ 0.06
PFDN5-213ENST00000550964 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
PFDN5-213ENST00000550964 ABCA6Q8N139 1617 aa15.41■□□□□ 0.06
PFDN5-213ENST00000550964 AGLP35573 1532 aa15.41■□□□□ 0.06
PFDN5-213ENST00000550964 ZNF644Q9H582 1327 aaPredicted RBP15.41■□□□□ 0.06
PFDN5-213ENST00000550964 MAST1Q9Y2H9 1570 aa15.4■□□□□ 0.06
PFDN5-213ENST00000550964 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
PFDN5-213ENST00000550964 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
PFDN5-213ENST00000550964 ESF1Q9H501 851 aaKnown RBP15.38■□□□□ 0.05
PFDN5-213ENST00000550964 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
PFDN5-213ENST00000550964 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
PFDN5-213ENST00000550964 SHANK2Q9UPX8 1470 aa15.37■□□□□ 0.05
PFDN5-213ENST00000550964 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
PFDN5-213ENST00000550964 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
PFDN5-213ENST00000550964 A2MP01023 1474 aa15.36■□□□□ 0.05
PFDN5-213ENST00000550964 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
PFDN5-213ENST00000550964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
PFDN5-213ENST00000550964 PLXNC1O60486 1568 aa15.35■□□□□ 0.05
PFDN5-213ENST00000550964 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
PFDN5-213ENST00000550964 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
PFDN5-213ENST00000550964 CNTLNQ9NXG0 1405 aa15.33■□□□□ 0.04
PFDN5-213ENST00000550964 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
PFDN5-213ENST00000550964 DAPK1P53355 1430 aa15.32■□□□□ 0.04
PFDN5-213ENST00000550964 FAM135AQ9P2D6 1515 aa15.32■□□□□ 0.04
PFDN5-213ENST00000550964 ANKRD30AQ9BXX3 1397 aa15.31■□□□□ 0.04
PFDN5-213ENST00000550964 MADDQ8WXG6 1647 aa15.31■□□□□ 0.04
PFDN5-213ENST00000550964 EIF2AK4Q9P2K8 1649 aaKnown RBP15.31■□□□□ 0.04
PFDN5-213ENST00000550964 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
PFDN5-213ENST00000550964 DUOX2Q9NRD8 1548 aa15.3■□□□□ 0.04
PFDN5-213ENST00000550964 RIMS1Q86UR5 1692 aaKnown RBP15.29■□□□□ 0.04
PFDN5-213ENST00000550964 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
PFDN5-213ENST00000550964 MROH2AA6NES4 1674 aa15.28■□□□□ 0.04
PFDN5-213ENST00000550964 PTPRMP28827 1452 aa15.28■□□□□ 0.04
PFDN5-213ENST00000550964 ABCC5O15440 1437 aa15.28■□□□□ 0.04
PFDN5-213ENST00000550964 MLECQ14165 292 aa15.28■□□□□ 0.04
PFDN5-213ENST00000550964 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
PFDN5-213ENST00000550964 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
PFDN5-213ENST00000550964 KIF3BO15066 747 aa15.24■□□□□ 0.03
PFDN5-213ENST00000550964 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
PFDN5-213ENST00000550964 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
PFDN5-213ENST00000550964 GGT6Q6P531 493 aa15.23■□□□□ 0.03
PFDN5-213ENST00000550964 ROCK1Q13464 1354 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms