RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 UBTFP17480 764 aaKnown RBP6.84□□□□□ -1.31
APAF1-208ENST00000549007 GOLGA2Q08379 1002 aa6.83□□□□□ -1.32
APAF1-208ENST00000549007 MFSD10Q14728 455 aa6.83□□□□□ -1.32
APAF1-208ENST00000549007 ARID3AQ99856 593 aa6.83□□□□□ -1.32
APAF1-208ENST00000549007 KDM4CQ9H3R0 1056 aa6.82□□□□□ -1.32
APAF1-208ENST00000549007 EMILIN3Q9NT22 766 aa6.82□□□□□ -1.32
APAF1-208ENST00000549007 MYO15BQ96JP2 1530 aa6.82□□□□□ -1.32
APAF1-208ENST00000549007 FXR2P51116 673 aaKnown RBP eCLIP6.81□□□□□ -1.32
APAF1-208ENST00000549007 SHROOM4Q9ULL8 1493 aa6.81□□□□□ -1.32
APAF1-208ENST00000549007 SCRIBQ14160 1630 aa6.81□□□□□ -1.32
APAF1-208ENST00000549007 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
APAF1-208ENST00000549007 DPY19L2Q6NUT2 758 aa6.81□□□□□ -1.32
APAF1-208ENST00000549007 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
APAF1-208ENST00000549007 PPP1R15BQ5SWA1 713 aa6.8□□□□□ -1.32
APAF1-208ENST00000549007 PIP4P2Q8N4L2 257 aa6.8□□□□□ -1.32
APAF1-208ENST00000549007 MS4A3Q96HJ5 214 aa6.8□□□□□ -1.32
APAF1-208ENST00000549007 CAMK2BQ13554 666 aa6.8□□□□□ -1.32
APAF1-208ENST00000549007 AK7Q96M32 723 aa6.8□□□□□ -1.32
APAF1-208ENST00000549007 FAM117AQ9C073 453 aa6.79□□□□□ -1.32
APAF1-208ENST00000549007 DSG2Q14126 1118 aa6.78□□□□□ -1.32
APAF1-208ENST00000549007 TRIM66O15016 1216 aa6.78□□□□□ -1.32
APAF1-208ENST00000549007 PDE4DQ08499 809 aa6.78□□□□□ -1.32
APAF1-208ENST00000549007 ARID3CA6NKF2 412 aa6.77□□□□□ -1.33
APAF1-208ENST00000549007 MKRN3Q13064 507 aaKnown RBP6.77□□□□□ -1.33
APAF1-208ENST00000549007 GRXCR2A6NFK2 248 aa6.76□□□□□ -1.33
APAF1-208ENST00000549007 CHRDL2Q6WN34 429 aa6.76□□□□□ -1.33
APAF1-208ENST00000549007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.75□□□□□ -1.33
APAF1-208ENST00000549007 UNC13AQ9UPW8 1703 aa6.75□□□□□ -1.33
APAF1-208ENST00000549007 GPHNQ9NQX3 736 aaPredicted RBP6.74□□□□□ -1.33
APAF1-208ENST00000549007 PODXL2Q9NZ53 605 aa6.74□□□□□ -1.33
APAF1-208ENST00000549007 FECHP22830 423 aa6.74□□□□□ -1.33
APAF1-208ENST00000549007 C1orf115Q9H7X2 142 aa6.74□□□□□ -1.33
APAF1-208ENST00000549007 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
APAF1-208ENST00000549007 GPR37O15354 613 aa6.73□□□□□ -1.33
APAF1-208ENST00000549007 UPF1Q92900 1129 aaKnown RBP eCLIP6.73□□□□□ -1.333e-6■■■■□ 19.5
APAF1-208ENST00000549007 NUTM2FA1L443 756 aa6.73□□□□□ -1.33
APAF1-208ENST00000549007 TTLL13PA6NNM8 815 aa6.72□□□□□ -1.33
APAF1-208ENST00000549007 ZNF316A6NFI3 1004 aaPredicted RBP6.71□□□□□ -1.33
APAF1-208ENST00000549007 PDIA6Q15084 440 aa6.71□□□□□ -1.34
APAF1-208ENST00000549007 CCDC102AQ96A19 550 aa6.71□□□□□ -1.34
APAF1-208ENST00000549007 BICRAQ9NZM4 1560 aa6.71□□□□□ -1.34
APAF1-208ENST00000549007 ZMYND15Q9H091 742 aa6.71□□□□□ -1.34
APAF1-208ENST00000549007 PLEKHG3A1L390 1219 aa6.7□□□□□ -1.34
APAF1-208ENST00000549007 TRIM35Q9UPQ4 493 aa6.7□□□□□ -1.34
APAF1-208ENST00000549007 DDX12PQ92771 950 aa6.7□□□□□ -1.34
APAF1-208ENST00000549007 MICALL2Q8IY33 904 aa6.69□□□□□ -1.34
APAF1-208ENST00000549007 PARP9Q8IXQ6 854 aa6.69□□□□□ -1.34
APAF1-208ENST00000549007 BMP2KQ9NSY1 1161 aaPredicted RBP6.69□□□□□ -1.34
APAF1-208ENST00000549007 C2orf72A6NCS6 295 aa6.68□□□□□ -1.34
APAF1-208ENST00000549007 TRIM26Q12899 539 aaPredicted RBP6.68□□□□□ -1.34
APAF1-208ENST00000549007 PLPP6Q8IY26 295 aa6.68□□□□□ -1.34
APAF1-208ENST00000549007 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
APAF1-208ENST00000549007 PRIM1P49642 420 aaKnown RBP6.67□□□□□ -1.34
APAF1-208ENST00000549007 TMC2Q8TDI7 906 aa6.67□□□□□ -1.34
APAF1-208ENST00000549007 RSPH6AQ9H0K4 717 aa6.67□□□□□ -1.34
APAF1-208ENST00000549007 TTLL12Q14166 644 aaPredicted RBP6.66□□□□□ -1.34
APAF1-208ENST00000549007 APBB1O00213 710 aa6.65□□□□□ -1.35
APAF1-208ENST00000549007 PDCD7Q8N8D1 485 aaKnown RBP6.65□□□□□ -1.35
APAF1-208ENST00000549007 FOXK1P85037 733 aa6.64□□□□□ -1.35
APAF1-208ENST00000549007 MAP3K9P80192 1104 aa6.64□□□□□ -1.35
APAF1-208ENST00000549007 CLUAP1Q96AJ1 413 aa6.64□□□□□ -1.35
APAF1-208ENST00000549007 REPIN1Q9BWE0 567 aaKnown RBP6.64□□□□□ -1.35
APAF1-208ENST00000549007 IRF6O14896 467 aa6.63□□□□□ -1.35
APAF1-208ENST00000549007 OSBPP22059 807 aa6.63□□□□□ -1.35
APAF1-208ENST00000549007 ILDR1Q86SU0 546 aaPredicted RBP6.63□□□□□ -1.35
APAF1-208ENST00000549007 NLRP7Q8WX94 980 aa6.63□□□□□ -1.35
APAF1-208ENST00000549007 MAP2K5Q13163 448 aa6.62□□□□□ -1.35
APAF1-208ENST00000549007 TMEM92Q6UXU6 159 aa6.62□□□□□ -1.35
APAF1-208ENST00000549007 HRCP23327 699 aa6.62□□□□□ -1.35
APAF1-208ENST00000549007 SPDYE16A6NNV3 312 aaPredicted RBP6.61□□□□□ -1.35
APAF1-208ENST00000549007 GNPATO15228 680 aa6.61□□□□□ -1.35
APAF1-208ENST00000549007 MS4A1P11836 297 aa6.61□□□□□ -1.35
APAF1-208ENST00000549007 TIE1P35590 1138 aa6.61□□□□□ -1.35
APAF1-208ENST00000549007 MINK1Q8N4C8 1332 aaPredicted RBP6.6□□□□□ -1.35
APAF1-208ENST00000549007 ATN1P54259 1190 aaPredicted RBP6.6□□□□□ -1.35
APAF1-208ENST00000549007 FAM161AQ3B820 660 aa6.6□□□□□ -1.35
APAF1-208ENST00000549007 CDHR5Q9HBB8 845 aa6.6□□□□□ -1.35
APAF1-208ENST00000549007 GIGYF2Q6Y7W6 1299 aaKnown RBP6.59□□□□□ -1.35
APAF1-208ENST00000549007 DDRGK1Q96HY6 314 aa6.58□□□□□ -1.36
APAF1-208ENST00000549007 BOLA1Q9Y3E2 137 aa6.58□□□□□ -1.36
APAF1-208ENST00000549007 KIF3CO14782 793 aa6.57□□□□□ -1.36
APAF1-208ENST00000549007 EVX2Q03828 476 aa6.57□□□□□ -1.36
APAF1-208ENST00000549007 AMHR2Q16671 573 aa6.57□□□□□ -1.36
APAF1-208ENST00000549007 PHOX2BQ99453 314 aa6.57□□□□□ -1.36
APAF1-208ENST00000549007 ATP1B4Q9UN42 357 aaPredicted RBP6.57□□□□□ -1.36
APAF1-208ENST00000549007 CECR2Q9BXF3 1484 aa6.57□□□□□ -1.36
APAF1-208ENST00000549007 HIC1Q14526 733 aa6.56□□□□□ -1.36
APAF1-208ENST00000549007 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
APAF1-208ENST00000549007 C19orf67A6NJJ6 358 aa6.56□□□□□ -1.36
APAF1-208ENST00000549007 ONECUT3O60422 494 aaPredicted RBP6.55□□□□□ -1.36
APAF1-208ENST00000549007 FCHSD2O94868 740 aa6.55□□□□□ -1.36
APAF1-208ENST00000549007 PTGDRQ13258 359 aa6.55□□□□□ -1.36
APAF1-208ENST00000549007 RBM33Q96EV2 1170 aaKnown RBP6.55□□□□□ -1.36
APAF1-208ENST00000549007 IRX5P78411 483 aaPredicted RBP6.55□□□□□ -1.36
APAF1-208ENST00000549007 MDM2Q00987 491 aaPredicted RBP6.54□□□□□ -1.36
APAF1-208ENST00000549007 POM121Q96HA1 1249 aa6.54□□□□□ -1.36
APAF1-208ENST00000549007 EVI5O60447 810 aa6.53□□□□□ -1.36
APAF1-208ENST00000549007 TSR1Q2NL82 804 aaKnown RBP6.53□□□□□ -1.36
APAF1-208ENST00000549007 OXER1Q8TDS5 423 aa6.53□□□□□ -1.36
APAF1-208ENST00000549007 TMEM121BQ9BXQ6 578 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms