RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
TMEM106C-210ENST00000548965 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
TMEM106C-210ENST00000548965 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
TMEM106C-210ENST00000548965 DENND4BO75064 1496 aaPredicted RBP13.75□□□□□ -0.21
TMEM106C-210ENST00000548965 SUPT6HQ7KZ85 1726 aaKnown RBP13.75□□□□□ -0.21
TMEM106C-210ENST00000548965 ABCC1P33527 1531 aa13.74□□□□□ -0.21
TMEM106C-210ENST00000548965 MTUS2Q5JR59 1369 aa13.73□□□□□ -0.21
TMEM106C-210ENST00000548965 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
TMEM106C-210ENST00000548965 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.21
TMEM106C-210ENST00000548965 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.21
TMEM106C-210ENST00000548965 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
TMEM106C-210ENST00000548965 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
TMEM106C-210ENST00000548965 KDM5CP41229 1560 aa13.7□□□□□ -0.22
TMEM106C-210ENST00000548965 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
TMEM106C-210ENST00000548965 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
TMEM106C-210ENST00000548965 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
TMEM106C-210ENST00000548965 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
TMEM106C-210ENST00000548965 GPATCH8Q9UKJ3 1502 aaKnown RBP13.68□□□□□ -0.22
TMEM106C-210ENST00000548965 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
TMEM106C-210ENST00000548965 MAP3K1Q13233 1512 aa13.66□□□□□ -0.22
TMEM106C-210ENST00000548965 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
TMEM106C-210ENST00000548965 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
TMEM106C-210ENST00000548965 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
TMEM106C-210ENST00000548965 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
TMEM106C-210ENST00000548965 NCOA2Q15596 1464 aa13.65□□□□□ -0.22
TMEM106C-210ENST00000548965 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
TMEM106C-210ENST00000548965 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
TMEM106C-210ENST00000548965 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
TMEM106C-210ENST00000548965 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
TMEM106C-210ENST00000548965 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
TMEM106C-210ENST00000548965 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
TMEM106C-210ENST00000548965 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
TMEM106C-210ENST00000548965 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
TMEM106C-210ENST00000548965 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
TMEM106C-210ENST00000548965 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
TMEM106C-210ENST00000548965 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
TMEM106C-210ENST00000548965 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
TMEM106C-210ENST00000548965 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
TMEM106C-210ENST00000548965 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
TMEM106C-210ENST00000548965 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
TMEM106C-210ENST00000548965 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
TMEM106C-210ENST00000548965 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
TMEM106C-210ENST00000548965 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
TMEM106C-210ENST00000548965 ATP7AQ04656 1500 aa13.58□□□□□ -0.24
TMEM106C-210ENST00000548965 REREQ9P2R6 1566 aa13.58□□□□□ -0.24
TMEM106C-210ENST00000548965 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
TMEM106C-210ENST00000548965 ATP10AO60312 1499 aa13.56□□□□□ -0.24
TMEM106C-210ENST00000548965 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
TMEM106C-210ENST00000548965 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
TMEM106C-210ENST00000548965 ADGBQ8N7X0 1667 aa13.56□□□□□ -0.24
TMEM106C-210ENST00000548965 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
TMEM106C-210ENST00000548965 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
TMEM106C-210ENST00000548965 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
TMEM106C-210ENST00000548965 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
TMEM106C-210ENST00000548965 APLP2Q06481 763 aa13.53□□□□□ -0.24
TMEM106C-210ENST00000548965 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
TMEM106C-210ENST00000548965 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
TMEM106C-210ENST00000548965 ZNF644Q9H582 1327 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-210ENST00000548965 MYOM3Q5VTT5 1437 aa13.52□□□□□ -0.25
TMEM106C-210ENST00000548965 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
TMEM106C-210ENST00000548965 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
TMEM106C-210ENST00000548965 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
TMEM106C-210ENST00000548965 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM106C-210ENST00000548965 PTPRMP28827 1452 aa13.5□□□□□ -0.25
TMEM106C-210ENST00000548965 AGLP35573 1532 aa13.49□□□□□ -0.25
TMEM106C-210ENST00000548965 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
TMEM106C-210ENST00000548965 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
TMEM106C-210ENST00000548965 MAST1Q9Y2H9 1570 aa13.46□□□□□ -0.25
TMEM106C-210ENST00000548965 MLECQ14165 292 aa13.46□□□□□ -0.25
TMEM106C-210ENST00000548965 A2MP01023 1474 aa13.46□□□□□ -0.25
TMEM106C-210ENST00000548965 C3P01024 1663 aa13.45□□□□□ -0.26
TMEM106C-210ENST00000548965 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
TMEM106C-210ENST00000548965 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
TMEM106C-210ENST00000548965 MROH2AA6NES4 1674 aa13.44□□□□□ -0.26
TMEM106C-210ENST00000548965 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
TMEM106C-210ENST00000548965 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
TMEM106C-210ENST00000548965 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
TMEM106C-210ENST00000548965 PREX1Q8TCU6 1659 aa13.41□□□□□ -0.26
TMEM106C-210ENST00000548965 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
TMEM106C-210ENST00000548965 EIF2AK4Q9P2K8 1649 aaKnown RBP13.39□□□□□ -0.27
TMEM106C-210ENST00000548965 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
TMEM106C-210ENST00000548965 RNF17Q9BXT8 1623 aaKnown RBP13.38□□□□□ -0.27
TMEM106C-210ENST00000548965 DAPK1P53355 1430 aa13.37□□□□□ -0.27
TMEM106C-210ENST00000548965 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
TMEM106C-210ENST00000548965 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
TMEM106C-210ENST00000548965 ZC3H13Q5T200 1668 aaKnown RBP13.35□□□□□ -0.27
TMEM106C-210ENST00000548965 ABCC5O15440 1437 aa13.35□□□□□ -0.27
TMEM106C-210ENST00000548965 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
TMEM106C-210ENST00000548965 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
TMEM106C-210ENST00000548965 CEP152O94986 1710 aa13.34□□□□□ -0.27
TMEM106C-210ENST00000548965 TSPY4P0CV99 314 aa13.34□□□□□ -0.27
TMEM106C-210ENST00000548965 TSPY10P0CW01 314 aa13.34□□□□□ -0.27
TMEM106C-210ENST00000548965 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
TMEM106C-210ENST00000548965 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
TMEM106C-210ENST00000548965 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
TMEM106C-210ENST00000548965 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
TMEM106C-210ENST00000548965 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
TMEM106C-210ENST00000548965 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
TMEM106C-210ENST00000548965 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
TMEM106C-210ENST00000548965 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms