RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-216ENST00000548379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTCH1-216ENST00000548379 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
PTCH1-216ENST00000548379 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-216ENST00000548379 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
PTCH1-216ENST00000548379 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
PTCH1-216ENST00000548379 KIF3CO14782 793 aa9.19□□□□□ -0.94
PTCH1-216ENST00000548379 SEMA3EO15041 775 aa9.18□□□□□ -0.94
PTCH1-216ENST00000548379 PLCG2P16885 1265 aa9.18□□□□□ -0.94
PTCH1-216ENST00000548379 FOXK1P85037 733 aa9.18□□□□□ -0.94
PTCH1-216ENST00000548379 DSG2Q14126 1118 aa9.18□□□□□ -0.94
PTCH1-216ENST00000548379 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
PTCH1-216ENST00000548379 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
PTCH1-216ENST00000548379 DCBLD2Q96PD2 775 aa9.17□□□□□ -0.94
PTCH1-216ENST00000548379 COLQQ9Y215 455 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-216ENST00000548379 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
PTCH1-216ENST00000548379 L3MBTL3Q96JM7 780 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-216ENST00000548379 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
PTCH1-216ENST00000548379 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
PTCH1-216ENST00000548379 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
PTCH1-216ENST00000548379 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
PTCH1-216ENST00000548379 C7P10643 843 aa9.13□□□□□ -0.95
PTCH1-216ENST00000548379 TMEM92Q6UXU6 159 aa9.13□□□□□ -0.95
PTCH1-216ENST00000548379 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-216ENST00000548379 SEC24BO95487 1268 aa9.11□□□□□ -0.95
PTCH1-216ENST00000548379 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
PTCH1-216ENST00000548379 G3V3G9 751 aa9.1□□□□□ -0.95
PTCH1-216ENST00000548379 PDIA6Q15084 440 aa9.09□□□□□ -0.95
PTCH1-216ENST00000548379 METRNQ9UJH8 293 aa9.09□□□□□ -0.95
PTCH1-216ENST00000548379 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-216ENST00000548379 DPYSL4O14531 572 aa9.08□□□□□ -0.96
PTCH1-216ENST00000548379 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
PTCH1-216ENST00000548379 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
PTCH1-216ENST00000548379 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-216ENST00000548379 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
PTCH1-216ENST00000548379 ZMYND10O75800 440 aa9□□□□□ -0.97
PTCH1-216ENST00000548379 PTGER2P43116 358 aa8.98□□□□□ -0.97
PTCH1-216ENST00000548379 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
PTCH1-216ENST00000548379 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
PTCH1-216ENST00000548379 SLC34A2O95436 690 aa8.97□□□□□ -0.97
PTCH1-216ENST00000548379 C3orf67Q6ZVT6 689 aa8.97□□□□□ -0.97
PTCH1-216ENST00000548379 PTCD2Q8WV60 388 aaKnown RBP8.97□□□□□ -0.97
PTCH1-216ENST00000548379 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
PTCH1-216ENST00000548379 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTCH1-216ENST00000548379 GPR37O15354 613 aa8.93□□□□□ -0.98
PTCH1-216ENST00000548379 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
PTCH1-216ENST00000548379 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
PTCH1-216ENST00000548379 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-216ENST00000548379 TBC1D12O60347 775 aa8.91□□□□□ -0.98
PTCH1-216ENST00000548379 EVI5O60447 810 aa8.91□□□□□ -0.98
PTCH1-216ENST00000548379 OSBPP22059 807 aa8.91□□□□□ -0.98
PTCH1-216ENST00000548379 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.91□□□□□ -0.98
PTCH1-216ENST00000548379 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
PTCH1-216ENST00000548379 BRPF1P55201 1214 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-216ENST00000548379 GRXCR2A6NFK2 248 aa8.89□□□□□ -0.99
PTCH1-216ENST00000548379 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
PTCH1-216ENST00000548379 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
PTCH1-216ENST00000548379 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
PTCH1-216ENST00000548379 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
PTCH1-216ENST00000548379 DDX12PQ92771 950 aa8.85□□□□□ -0.99
PTCH1-216ENST00000548379 AK7Q96M32 723 aa8.84□□□□□ -0.99
PTCH1-216ENST00000548379 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
PTCH1-216ENST00000548379 ZNF316A6NFI3 1004 aaPredicted RBP8.81□□□□□ -1
PTCH1-216ENST00000548379 PHF14O94880 888 aa8.81□□□□□ -1
PTCH1-216ENST00000548379 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
PTCH1-216ENST00000548379 NUTM2FA1L443 756 aa8.8□□□□□ -1
PTCH1-216ENST00000548379 EPAS1Q99814 870 aa8.8□□□□□ -1
PTCH1-216ENST00000548379 TRIM66O15016 1216 aa8.79□□□□□ -1
PTCH1-216ENST00000548379 GNPATO15228 680 aa8.79□□□□□ -1
PTCH1-216ENST00000548379 PTGDRQ13258 359 aa8.79□□□□□ -1
PTCH1-216ENST00000548379 HIC1Q14526 733 aa8.79□□□□□ -1
PTCH1-216ENST00000548379 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
PTCH1-216ENST00000548379 FCHSD2O94868 740 aa8.78□□□□□ -1
PTCH1-216ENST00000548379 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
PTCH1-216ENST00000548379 NEUROD2Q15784 382 aa8.78□□□□□ -1
PTCH1-216ENST00000548379 LHX8Q68G74 356 aa8.78□□□□□ -1
PTCH1-216ENST00000548379 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
PTCH1-216ENST00000548379 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
PTCH1-216ENST00000548379 MAP2K5Q13163 448 aa8.77□□□□□ -1.01
PTCH1-216ENST00000548379 DOK7Q18PE1 504 aa8.76□□□□□ -1.01
PTCH1-216ENST00000548379 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
PTCH1-216ENST00000548379 SLAIN1Q8ND83 568 aa8.76□□□□□ -1.01
PTCH1-216ENST00000548379 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
PTCH1-216ENST00000548379 ZSWIM6Q9HCJ5 1215 aa8.76□□□□□ -1.01
PTCH1-216ENST00000548379 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-216ENST00000548379 IRF6O14896 467 aa8.75□□□□□ -1.01
PTCH1-216ENST00000548379 FECHP22830 423 aa8.75□□□□□ -1.01
PTCH1-216ENST00000548379 FOSBP53539 338 aa8.75□□□□□ -1.01
PTCH1-216ENST00000548379 PDE4DQ08499 809 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 GPR153Q6NV75 609 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
PTCH1-216ENST00000548379 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
PTCH1-216ENST00000548379 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
PTCH1-216ENST00000548379 AMHR2Q16671 573 aa8.71□□□□□ -1.02
PTCH1-216ENST00000548379 ARSIQ5FYB1 569 aa8.71□□□□□ -1.02
PTCH1-216ENST00000548379 KHSRPQ92945 711 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTCH1-216ENST00000548379 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms