RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
C12orf54-203ENST00000548364 ITSN2Q9NZM3 1697 aa18.41■□□□□ 0.54
C12orf54-203ENST00000548364 MAGI2Q86UL8 1455 aa18.41■□□□□ 0.54
C12orf54-203ENST00000548364 CDC42BPAQ5VT25 1732 aa18.41■□□□□ 0.54
C12orf54-203ENST00000548364 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
C12orf54-203ENST00000548364 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
C12orf54-203ENST00000548364 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.54
C12orf54-203ENST00000548364 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
C12orf54-203ENST00000548364 ZFYVE16Q7Z3T8 1539 aa18.39■□□□□ 0.53
C12orf54-203ENST00000548364 ABCC1P33527 1531 aa18.37■□□□□ 0.53
C12orf54-203ENST00000548364 KDM5CP41229 1560 aa18.36■□□□□ 0.53
C12orf54-203ENST00000548364 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
C12orf54-203ENST00000548364 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
C12orf54-203ENST00000548364 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
C12orf54-203ENST00000548364 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
C12orf54-203ENST00000548364 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
C12orf54-203ENST00000548364 RAPGEF3O95398 923 aa18.33■□□□□ 0.52
C12orf54-203ENST00000548364 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.52
C12orf54-203ENST00000548364 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
C12orf54-203ENST00000548364 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
C12orf54-203ENST00000548364 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
C12orf54-203ENST00000548364 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
C12orf54-203ENST00000548364 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
C12orf54-203ENST00000548364 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
C12orf54-203ENST00000548364 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
C12orf54-203ENST00000548364 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
C12orf54-203ENST00000548364 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
C12orf54-203ENST00000548364 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
C12orf54-203ENST00000548364 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
C12orf54-203ENST00000548364 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
C12orf54-203ENST00000548364 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
C12orf54-203ENST00000548364 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
C12orf54-203ENST00000548364 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
C12orf54-203ENST00000548364 YEATS2Q9ULM3 1422 aa18.22■□□□□ 0.51
C12orf54-203ENST00000548364 ATP10AO60312 1499 aa18.21■□□□□ 0.51
C12orf54-203ENST00000548364 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
C12orf54-203ENST00000548364 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
C12orf54-203ENST00000548364 INO80Q9ULG1 1556 aaPredicted RBP18.19■□□□□ 0.5
C12orf54-203ENST00000548364 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
C12orf54-203ENST00000548364 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
C12orf54-203ENST00000548364 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
C12orf54-203ENST00000548364 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
C12orf54-203ENST00000548364 KIDINS220Q9ULH0 1771 aa18.17■□□□□ 0.5
C12orf54-203ENST00000548364 APLP2Q06481 763 aa18.17■□□□□ 0.5
C12orf54-203ENST00000548364 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
C12orf54-203ENST00000548364 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
C12orf54-203ENST00000548364 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
C12orf54-203ENST00000548364 SIGLEC1Q9BZZ2 1709 aa18.15■□□□□ 0.5
C12orf54-203ENST00000548364 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.5
C12orf54-203ENST00000548364 AGLP35573 1532 aa18.14■□□□□ 0.49
C12orf54-203ENST00000548364 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
C12orf54-203ENST00000548364 ADGBQ8N7X0 1667 aa18.14■□□□□ 0.49
C12orf54-203ENST00000548364 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
C12orf54-203ENST00000548364 PTPRMP28827 1452 aa18.13■□□□□ 0.49
C12orf54-203ENST00000548364 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
C12orf54-203ENST00000548364 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
C12orf54-203ENST00000548364 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
C12orf54-203ENST00000548364 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
C12orf54-203ENST00000548364 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
C12orf54-203ENST00000548364 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
C12orf54-203ENST00000548364 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
C12orf54-203ENST00000548364 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
C12orf54-203ENST00000548364 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
C12orf54-203ENST00000548364 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
C12orf54-203ENST00000548364 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
C12orf54-203ENST00000548364 A2MP01023 1474 aa18.03■□□□□ 0.48
C12orf54-203ENST00000548364 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
C12orf54-203ENST00000548364 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
C12orf54-203ENST00000548364 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
C12orf54-203ENST00000548364 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
C12orf54-203ENST00000548364 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
C12orf54-203ENST00000548364 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
C12orf54-203ENST00000548364 SHANK2Q9UPX8 1470 aa17.99■□□□□ 0.47
C12orf54-203ENST00000548364 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
C12orf54-203ENST00000548364 PREX1Q8TCU6 1659 aa17.98■□□□□ 0.47
C12orf54-203ENST00000548364 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
C12orf54-203ENST00000548364 ESF1Q9H501 851 aaKnown RBP17.97■□□□□ 0.47
C12orf54-203ENST00000548364 MLECQ14165 292 aa17.96■□□□□ 0.47
C12orf54-203ENST00000548364 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
C12orf54-203ENST00000548364 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
C12orf54-203ENST00000548364 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
C12orf54-203ENST00000548364 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
C12orf54-203ENST00000548364 C3P01024 1663 aa17.95■□□□□ 0.46
C12orf54-203ENST00000548364 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
C12orf54-203ENST00000548364 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
C12orf54-203ENST00000548364 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
C12orf54-203ENST00000548364 LMTK3Q96Q04 1460 aa17.91■□□□□ 0.46
C12orf54-203ENST00000548364 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
C12orf54-203ENST00000548364 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
C12orf54-203ENST00000548364 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
C12orf54-203ENST00000548364 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
C12orf54-203ENST00000548364 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
C12orf54-203ENST00000548364 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
C12orf54-203ENST00000548364 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
C12orf54-203ENST00000548364 NPATQ14207 1427 aa17.88■□□□□ 0.45
C12orf54-203ENST00000548364 DAPK1P53355 1430 aa17.87■□□□□ 0.45
C12orf54-203ENST00000548364 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
C12orf54-203ENST00000548364 ERBINQ96RT1 1412 aa17.85■□□□□ 0.45
C12orf54-203ENST00000548364 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
C12orf54-203ENST00000548364 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms