RNA–Protein interactions for RNA: ENST00000547500.1

NCKAP1L-203, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-203ENST00000547500 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
NCKAP1L-203ENST00000547500 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
NCKAP1L-203ENST00000547500 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
NCKAP1L-203ENST00000547500 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
NCKAP1L-203ENST00000547500 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
NCKAP1L-203ENST00000547500 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
NCKAP1L-203ENST00000547500 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.48
NCKAP1L-203ENST00000547500 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
NCKAP1L-203ENST00000547500 ARSIQ5FYB1 569 aa12.05□□□□□ -0.48
NCKAP1L-203ENST00000547500 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
NCKAP1L-203ENST00000547500 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
NCKAP1L-203ENST00000547500 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
NCKAP1L-203ENST00000547500 NLRP6P59044 892 aa12.02□□□□□ -0.49
NCKAP1L-203ENST00000547500 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
NCKAP1L-203ENST00000547500 KIF3CO14782 793 aa11.98□□□□□ -0.49
NCKAP1L-203ENST00000547500 RGL2O15211 777 aa11.98□□□□□ -0.49
NCKAP1L-203ENST00000547500 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
NCKAP1L-203ENST00000547500 STK25O00506 426 aa11.95□□□□□ -0.5
NCKAP1L-203ENST00000547500 RNF166Q96A37 237 aaPredicted RBP11.95□□□□□ -0.5
NCKAP1L-203ENST00000547500 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
NCKAP1L-203ENST00000547500 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
NCKAP1L-203ENST00000547500 PPP1R37O75864 691 aa11.89□□□□□ -0.51
NCKAP1L-203ENST00000547500 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
NCKAP1L-203ENST00000547500 NUDT7P0C024 238 aa11.88□□□□□ -0.51
NCKAP1L-203ENST00000547500 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
NCKAP1L-203ENST00000547500 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
NCKAP1L-203ENST00000547500 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
NCKAP1L-203ENST00000547500 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
NCKAP1L-203ENST00000547500 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
NCKAP1L-203ENST00000547500 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.52
NCKAP1L-203ENST00000547500 AXIN2Q9Y2T1 843 aa11.81□□□□□ -0.52
NCKAP1L-203ENST00000547500 SLC34A2O95436 690 aa11.78□□□□□ -0.52
NCKAP1L-203ENST00000547500 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
NCKAP1L-203ENST00000547500 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
NCKAP1L-203ENST00000547500 TMC2Q8TDI7 906 aa11.74□□□□□ -0.53
NCKAP1L-203ENST00000547500 PTGER2P43116 358 aa11.72□□□□□ -0.53
NCKAP1L-203ENST00000547500 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
NCKAP1L-203ENST00000547500 PBX2P40425 430 aa11.68□□□□□ -0.54
NCKAP1L-203ENST00000547500 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
NCKAP1L-203ENST00000547500 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
NCKAP1L-203ENST00000547500 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
NCKAP1L-203ENST00000547500 FOXK1P85037 733 aa11.63□□□□□ -0.55
NCKAP1L-203ENST00000547500 DSG2Q14126 1118 aa11.63□□□□□ -0.55
NCKAP1L-203ENST00000547500 PSEN2P49810 448 aa11.62□□□□□ -0.55
NCKAP1L-203ENST00000547500 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
NCKAP1L-203ENST00000547500 ARHGAP33O14559 1287 aa11.6□□□□□ -0.55
NCKAP1L-203ENST00000547500 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
NCKAP1L-203ENST00000547500 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
NCKAP1L-203ENST00000547500 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
NCKAP1L-203ENST00000547500 HRO43593 1189 aa11.57□□□□□ -0.56
NCKAP1L-203ENST00000547500 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
NCKAP1L-203ENST00000547500 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
NCKAP1L-203ENST00000547500 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
NCKAP1L-203ENST00000547500 TK2O00142 265 aa11.49□□□□□ -0.57
NCKAP1L-203ENST00000547500 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
NCKAP1L-203ENST00000547500 UPF1Q92900 1129 aaKnown RBP eCLIP11.48□□□□□ -0.57
NCKAP1L-203ENST00000547500 HCSTQ9UBK5 93 aa11.48□□□□□ -0.57
NCKAP1L-203ENST00000547500 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
NCKAP1L-203ENST00000547500 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
NCKAP1L-203ENST00000547500 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
NCKAP1L-203ENST00000547500 KCNK17Q96T54 332 aa11.46□□□□□ -0.57
NCKAP1L-203ENST00000547500 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
NCKAP1L-203ENST00000547500 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
NCKAP1L-203ENST00000547500 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
NCKAP1L-203ENST00000547500 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
NCKAP1L-203ENST00000547500 TBC1D12O60347 775 aa11.42□□□□□ -0.58
NCKAP1L-203ENST00000547500 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
NCKAP1L-203ENST00000547500 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.58
NCKAP1L-203ENST00000547500 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
NCKAP1L-203ENST00000547500 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
NCKAP1L-203ENST00000547500 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
NCKAP1L-203ENST00000547500 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
NCKAP1L-203ENST00000547500 FOSBP53539 338 aa11.36□□□□□ -0.59
NCKAP1L-203ENST00000547500 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
NCKAP1L-203ENST00000547500 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
NCKAP1L-203ENST00000547500 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
NCKAP1L-203ENST00000547500 PTPN5P54829 565 aa11.31□□□□□ -0.6
NCKAP1L-203ENST00000547500 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
NCKAP1L-203ENST00000547500 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
NCKAP1L-203ENST00000547500 EVI5O60447 810 aa11.29□□□□□ -0.6
NCKAP1L-203ENST00000547500 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
NCKAP1L-203ENST00000547500 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
NCKAP1L-203ENST00000547500 PDE4AP27815 886 aa11.28□□□□□ -0.6
NCKAP1L-203ENST00000547500 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
NCKAP1L-203ENST00000547500 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
NCKAP1L-203ENST00000547500 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
NCKAP1L-203ENST00000547500 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
NCKAP1L-203ENST00000547500 PTPREP23469 700 aa11.25□□□□□ -0.61
NCKAP1L-203ENST00000547500 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
NCKAP1L-203ENST00000547500 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
NCKAP1L-203ENST00000547500 MFSD10Q14728 455 aa11.24□□□□□ -0.61
NCKAP1L-203ENST00000547500 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
NCKAP1L-203ENST00000547500 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
NCKAP1L-203ENST00000547500 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
NCKAP1L-203ENST00000547500 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
NCKAP1L-203ENST00000547500 COL9A1P20849 921 aa11.19□□□□□ -0.62
NCKAP1L-203ENST00000547500 PROX2Q3B8N5 592 aa11.19□□□□□ -0.62
NCKAP1L-203ENST00000547500 WNT2BQ93097 391 aa11.19□□□□□ -0.62
NCKAP1L-203ENST00000547500 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
NCKAP1L-203ENST00000547500 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms