RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 MFRPQ9BY79 579 aa10.09□□□□□ -0.79
RAB3IP-209ENST00000547055 FBXO22Q8NEZ5 403 aa10.08□□□□□ -0.8
RAB3IP-209ENST00000547055 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
RAB3IP-209ENST00000547055 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
RAB3IP-209ENST00000547055 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
RAB3IP-209ENST00000547055 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
RAB3IP-209ENST00000547055 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
RAB3IP-209ENST00000547055 TMEM92Q6UXU6 159 aa9.97□□□□□ -0.81
RAB3IP-209ENST00000547055 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
RAB3IP-209ENST00000547055 PPP1R37O75864 691 aa9.93□□□□□ -0.82
RAB3IP-209ENST00000547055 HOXB1P14653 301 aaPredicted RBP9.93□□□□□ -0.82
RAB3IP-209ENST00000547055 DOK7Q18PE1 504 aa9.92□□□□□ -0.82
RAB3IP-209ENST00000547055 ERBB3P21860 1342 aa9.91□□□□□ -0.82
RAB3IP-209ENST00000547055 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
RAB3IP-209ENST00000547055 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
RAB3IP-209ENST00000547055 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
RAB3IP-209ENST00000547055 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
RAB3IP-209ENST00000547055 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
RAB3IP-209ENST00000547055 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
RAB3IP-209ENST00000547055 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
RAB3IP-209ENST00000547055 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
RAB3IP-209ENST00000547055 KIF3CO14782 793 aa9.84□□□□□ -0.83
RAB3IP-209ENST00000547055 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
RAB3IP-209ENST00000547055 PTGER2P43116 358 aa9.83□□□□□ -0.84
RAB3IP-209ENST00000547055 ZSWIM6Q9HCJ5 1215 aa9.82□□□□□ -0.84
RAB3IP-209ENST00000547055 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
RAB3IP-209ENST00000547055 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
RAB3IP-209ENST00000547055 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
RAB3IP-209ENST00000547055 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
RAB3IP-209ENST00000547055 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
RAB3IP-209ENST00000547055 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-209ENST00000547055 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
RAB3IP-209ENST00000547055 FOXK1P85037 733 aa9.72□□□□□ -0.85
RAB3IP-209ENST00000547055 SLC34A2O95436 690 aa9.71□□□□□ -0.86
RAB3IP-209ENST00000547055 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
RAB3IP-209ENST00000547055 PLPP6Q8IY26 295 aa9.7□□□□□ -0.86
RAB3IP-209ENST00000547055 DSG2Q14126 1118 aa9.69□□□□□ -0.86
RAB3IP-209ENST00000547055 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
RAB3IP-209ENST00000547055 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
RAB3IP-209ENST00000547055 BBXQ8WY36 941 aaPredicted RBP9.68□□□□□ -0.86
RAB3IP-209ENST00000547055 NUDT7P0C024 238 aa9.67□□□□□ -0.86
RAB3IP-209ENST00000547055 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
RAB3IP-209ENST00000547055 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
RAB3IP-209ENST00000547055 PDE4AP27815 886 aa9.65□□□□□ -0.86
RAB3IP-209ENST00000547055 NCKAP5LQ9HCH0 1330 aa9.64□□□□□ -0.87
RAB3IP-209ENST00000547055 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
RAB3IP-209ENST00000547055 PTCD2Q8WV60 388 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-209ENST00000547055 TBC1D12O60347 775 aa9.61□□□□□ -0.87
RAB3IP-209ENST00000547055 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB3IP-209ENST00000547055 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-209ENST00000547055 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-209ENST00000547055 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
RAB3IP-209ENST00000547055 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
RAB3IP-209ENST00000547055 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-209ENST00000547055 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
RAB3IP-209ENST00000547055 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB3IP-209ENST00000547055 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
RAB3IP-209ENST00000547055 OXER1Q8TDS5 423 aa9.56□□□□□ -0.88
RAB3IP-209ENST00000547055 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
RAB3IP-209ENST00000547055 PSDA5PKW4 1024 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-209ENST00000547055 MFSD10Q14728 455 aa9.54□□□□□ -0.88
RAB3IP-209ENST00000547055 PAXIP1Q6ZW49 1069 aaPredicted RBP9.53□□□□□ -0.88
RAB3IP-209ENST00000547055 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
RAB3IP-209ENST00000547055 PBX2P40425 430 aa9.5□□□□□ -0.89
RAB3IP-209ENST00000547055 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
RAB3IP-209ENST00000547055 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
RAB3IP-209ENST00000547055 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
RAB3IP-209ENST00000547055 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
RAB3IP-209ENST00000547055 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
RAB3IP-209ENST00000547055 EVI5O60447 810 aa9.45□□□□□ -0.9
RAB3IP-209ENST00000547055 ARHGAP33O14559 1287 aa9.44□□□□□ -0.9
RAB3IP-209ENST00000547055 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-209ENST00000547055 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
RAB3IP-209ENST00000547055 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-209ENST00000547055 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
RAB3IP-209ENST00000547055 PSEN2P49810 448 aa9.4□□□□□ -0.9
RAB3IP-209ENST00000547055 RGS20O76081 388 aa9.39□□□□□ -0.91
RAB3IP-209ENST00000547055 FOSBP53539 338 aa9.39□□□□□ -0.91
RAB3IP-209ENST00000547055 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
RAB3IP-209ENST00000547055 DPYSL4O14531 572 aa9.38□□□□□ -0.91
RAB3IP-209ENST00000547055 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
RAB3IP-209ENST00000547055 KCNK17Q96T54 332 aa9.38□□□□□ -0.91
RAB3IP-209ENST00000547055 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
RAB3IP-209ENST00000547055 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
RAB3IP-209ENST00000547055 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
RAB3IP-209ENST00000547055 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
RAB3IP-209ENST00000547055 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
RAB3IP-209ENST00000547055 PTPREP23469 700 aa9.34□□□□□ -0.91
RAB3IP-209ENST00000547055 TK2O00142 265 aa9.33□□□□□ -0.92
RAB3IP-209ENST00000547055 E2F4Q16254 413 aa9.33□□□□□ -0.92
RAB3IP-209ENST00000547055 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
RAB3IP-209ENST00000547055 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
RAB3IP-209ENST00000547055 PHF14O94880 888 aa9.3□□□□□ -0.92
RAB3IP-209ENST00000547055 TSHZ2Q9NRE2 1034 aa9.3□□□□□ -0.92
RAB3IP-209ENST00000547055 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
RAB3IP-209ENST00000547055 HRO43593 1189 aa9.28□□□□□ -0.92
RAB3IP-209ENST00000547055 FBXW7Q969H0 707 aa9.28□□□□□ -0.92
RAB3IP-209ENST00000547055 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
RAB3IP-209ENST00000547055 VPS9D1Q9Y2B5 631 aa9.28□□□□□ -0.92
RAB3IP-209ENST00000547055 IFFO2Q5TF58 517 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms