RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 TMEM92Q6UXU6 159 aa13.28□□□□□ -0.28
LINC02404-201ENST00000546710 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
LINC02404-201ENST00000546710 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
LINC02404-201ENST00000546710 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
LINC02404-201ENST00000546710 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
LINC02404-201ENST00000546710 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
LINC02404-201ENST00000546710 EMP3P54852 163 aa13.15□□□□□ -0.3
LINC02404-201ENST00000546710 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
LINC02404-201ENST00000546710 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
LINC02404-201ENST00000546710 KIF3CO14782 793 aa13.11□□□□□ -0.31
LINC02404-201ENST00000546710 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
LINC02404-201ENST00000546710 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
LINC02404-201ENST00000546710 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
LINC02404-201ENST00000546710 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
LINC02404-201ENST00000546710 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
LINC02404-201ENST00000546710 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
LINC02404-201ENST00000546710 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
LINC02404-201ENST00000546710 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
LINC02404-201ENST00000546710 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
LINC02404-201ENST00000546710 KRTAP3-3Q9BYR6 98 aa12.97□□□□□ -0.33
LINC02404-201ENST00000546710 KRTAP3-2Q9BYR7 98 aa12.97□□□□□ -0.33
LINC02404-201ENST00000546710 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
LINC02404-201ENST00000546710 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
LINC02404-201ENST00000546710 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
LINC02404-201ENST00000546710 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
LINC02404-201ENST00000546710 FOXK1P85037 733 aa12.94□□□□□ -0.34
LINC02404-201ENST00000546710 DSG2Q14126 1118 aa12.94□□□□□ -0.34
LINC02404-201ENST00000546710 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
LINC02404-201ENST00000546710 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
LINC02404-201ENST00000546710 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
LINC02404-201ENST00000546710 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
LINC02404-201ENST00000546710 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
LINC02404-201ENST00000546710 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
LINC02404-201ENST00000546710 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC02404-201ENST00000546710 SLC34A2O95436 690 aa12.9□□□□□ -0.34
LINC02404-201ENST00000546710 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
LINC02404-201ENST00000546710 PDE4AP27815 886 aa12.88□□□□□ -0.35
LINC02404-201ENST00000546710 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
LINC02404-201ENST00000546710 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
LINC02404-201ENST00000546710 ERBB3P21860 1342 aa12.87□□□□□ -0.35
LINC02404-201ENST00000546710 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
LINC02404-201ENST00000546710 PPP1R15BQ5SWA1 713 aa12.85□□□□□ -0.35
LINC02404-201ENST00000546710 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
LINC02404-201ENST00000546710 NUDT7P0C024 238 aa12.83□□□□□ -0.36
LINC02404-201ENST00000546710 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
LINC02404-201ENST00000546710 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
LINC02404-201ENST00000546710 DDX27Q96GQ7 796 aaKnown RBP12.8□□□□□ -0.36
LINC02404-201ENST00000546710 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
LINC02404-201ENST00000546710 MFSD10Q14728 455 aa12.78□□□□□ -0.36
LINC02404-201ENST00000546710 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.373e-8■□□□□ 9.4
LINC02404-201ENST00000546710 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
LINC02404-201ENST00000546710 TBC1D12O60347 775 aa12.74□□□□□ -0.37
LINC02404-201ENST00000546710 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
LINC02404-201ENST00000546710 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
LINC02404-201ENST00000546710 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
LINC02404-201ENST00000546710 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
LINC02404-201ENST00000546710 EMILIN3Q9NT22 766 aa12.66□□□□□ -0.38
LINC02404-201ENST00000546710 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
LINC02404-201ENST00000546710 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
LINC02404-201ENST00000546710 CAMK2BQ13554 666 aa12.61□□□□□ -0.39
LINC02404-201ENST00000546710 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
LINC02404-201ENST00000546710 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
LINC02404-201ENST00000546710 EVI5O60447 810 aa12.59□□□□□ -0.39
LINC02404-201ENST00000546710 PTGER2P43116 358 aa12.59□□□□□ -0.39
LINC02404-201ENST00000546710 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
LINC02404-201ENST00000546710 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
LINC02404-201ENST00000546710 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
LINC02404-201ENST00000546710 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
LINC02404-201ENST00000546710 DPYSL4O14531 572 aa12.54□□□□□ -0.4
LINC02404-201ENST00000546710 PBX2P40425 430 aa12.54□□□□□ -0.4
LINC02404-201ENST00000546710 WDR70Q9NW82 654 aa12.54□□□□□ -0.4
LINC02404-201ENST00000546710 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
LINC02404-201ENST00000546710 LSM11P83369 360 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC02404-201ENST00000546710 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
LINC02404-201ENST00000546710 E2F4Q16254 413 aa12.51□□□□□ -0.41
LINC02404-201ENST00000546710 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
LINC02404-201ENST00000546710 FOSBP53539 338 aa12.5□□□□□ -0.41
LINC02404-201ENST00000546710 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
LINC02404-201ENST00000546710 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
LINC02404-201ENST00000546710 PSEN2P49810 448 aa12.46□□□□□ -0.41
LINC02404-201ENST00000546710 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
LINC02404-201ENST00000546710 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
LINC02404-201ENST00000546710 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
LINC02404-201ENST00000546710 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
LINC02404-201ENST00000546710 PCDHGA10Q9Y5H3 936 aa12.42□□□□□ -0.42
LINC02404-201ENST00000546710 PDIA6Q15084 440 aa12.41□□□□□ -0.42
LINC02404-201ENST00000546710 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
LINC02404-201ENST00000546710 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
LINC02404-201ENST00000546710 PHF14O94880 888 aa12.39□□□□□ -0.43
LINC02404-201ENST00000546710 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
LINC02404-201ENST00000546710 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
LINC02404-201ENST00000546710 DDX12PQ92771 950 aa12.38□□□□□ -0.43
LINC02404-201ENST00000546710 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
LINC02404-201ENST00000546710 PTPREP23469 700 aa12.37□□□□□ -0.43
LINC02404-201ENST00000546710 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
LINC02404-201ENST00000546710 TK2O00142 265 aa12.34□□□□□ -0.43
LINC02404-201ENST00000546710 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
LINC02404-201ENST00000546710 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
LINC02404-201ENST00000546710 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
LINC02404-201ENST00000546710 EPAS1Q99814 870 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms