RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
AC078880.1-201ENST00000546696 PPP1R37O75864 691 aa16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 ZNF710Q8N1W2 664 aa16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 POTEB3A0JP26 581 aa16.72■□□□□ 0.27
AC078880.1-201ENST00000546696 POTEBQ6S5H4 581 aa16.72■□□□□ 0.27
AC078880.1-201ENST00000546696 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
AC078880.1-201ENST00000546696 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
AC078880.1-201ENST00000546696 RYDENQ9NUL5 291 aaKnown RBP16.7■□□□□ 0.26
AC078880.1-201ENST00000546696 HS3ST6Q96QI5 342 aa16.67■□□□□ 0.26
AC078880.1-201ENST00000546696 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
AC078880.1-201ENST00000546696 HOXB1P14653 301 aaPredicted RBP16.63■□□□□ 0.25
AC078880.1-201ENST00000546696 C2orf72A6NCS6 295 aa16.62■□□□□ 0.25
AC078880.1-201ENST00000546696 KIF3CO14782 793 aa16.61■□□□□ 0.25
AC078880.1-201ENST00000546696 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
AC078880.1-201ENST00000546696 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
AC078880.1-201ENST00000546696 ERBB3P21860 1342 aa16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
AC078880.1-201ENST00000546696 ZSWIM6Q9HCJ5 1215 aa16.53■□□□□ 0.24
AC078880.1-201ENST00000546696 KRTAP3-3Q9BYR6 98 aa16.51■□□□□ 0.23
AC078880.1-201ENST00000546696 KRTAP3-2Q9BYR7 98 aa16.51■□□□□ 0.23
AC078880.1-201ENST00000546696 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
AC078880.1-201ENST00000546696 SPNS2Q8IVW8 549 aa16.46■□□□□ 0.23
AC078880.1-201ENST00000546696 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
AC078880.1-201ENST00000546696 BBXQ8WY36 941 aaPredicted RBP16.42■□□□□ 0.22
AC078880.1-201ENST00000546696 FOXK1P85037 733 aa16.4■□□□□ 0.22
AC078880.1-201ENST00000546696 SLC34A2O95436 690 aa16.39■□□□□ 0.21
AC078880.1-201ENST00000546696 NUDT7P0C024 238 aa16.37■□□□□ 0.21
AC078880.1-201ENST00000546696 MMRN1Q13201 1228 aa16.37■□□□□ 0.21
AC078880.1-201ENST00000546696 DSG2Q14126 1118 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 PLPP6Q8IY26 295 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 PCDHGA4Q9Y5G9 962 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
AC078880.1-201ENST00000546696 PDE4AP27815 886 aa16.29■□□□□ 0.2
AC078880.1-201ENST00000546696 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 ZNF687Q8N1G0 1237 aa16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 LHX6Q9UPM6 363 aa16.26■□□□□ 0.19
AC078880.1-201ENST00000546696 PTCD2Q8WV60 388 aaKnown RBP16.25■□□□□ 0.19
AC078880.1-201ENST00000546696 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
AC078880.1-201ENST00000546696 PPP1R15BQ5SWA1 713 aa16.22■□□□□ 0.19
AC078880.1-201ENST00000546696 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
AC078880.1-201ENST00000546696 TBC1D12O60347 775 aa16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 MFSD10Q14728 455 aa16.15■□□□□ 0.18
AC078880.1-201ENST00000546696 UPF1Q92900 1129 aaKnown RBP eCLIP16.14■□□□□ 0.17
AC078880.1-201ENST00000546696 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
AC078880.1-201ENST00000546696 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
AC078880.1-201ENST00000546696 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
AC078880.1-201ENST00000546696 POTEEQ6S8J3 1075 aa16.12■□□□□ 0.17
AC078880.1-201ENST00000546696 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
AC078880.1-201ENST00000546696 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
AC078880.1-201ENST00000546696 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
AC078880.1-201ENST00000546696 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
AC078880.1-201ENST00000546696 LSM11P83369 360 aaKnown RBP eCLIP16.05■□□□□ 0.16
AC078880.1-201ENST00000546696 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
AC078880.1-201ENST00000546696 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
AC078880.1-201ENST00000546696 PBX2P40425 430 aa15.98■□□□□ 0.15
AC078880.1-201ENST00000546696 EMILIN3Q9NT22 766 aa15.96■□□□□ 0.15
AC078880.1-201ENST00000546696 PSEN2P49810 448 aa15.95■□□□□ 0.14
AC078880.1-201ENST00000546696 MAP3K9P80192 1104 aa15.95■□□□□ 0.14
AC078880.1-201ENST00000546696 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
AC078880.1-201ENST00000546696 CAMK2BQ13554 666 aa15.93■□□□□ 0.14
AC078880.1-201ENST00000546696 ARHGAP33O14559 1287 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 EVI5O60447 810 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 DMRTA1Q5VZB9 504 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 ZNF454Q8N9F8 522 aa15.88■□□□□ 0.13
AC078880.1-201ENST00000546696 KCNK17Q96T54 332 aa15.86■□□□□ 0.13
AC078880.1-201ENST00000546696 ADGRD1Q6QNK2 874 aa15.85■□□□□ 0.13
AC078880.1-201ENST00000546696 PTGER2P43116 358 aa15.83■□□□□ 0.12
AC078880.1-201ENST00000546696 FOSBP53539 338 aa15.83■□□□□ 0.12
AC078880.1-201ENST00000546696 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
AC078880.1-201ENST00000546696 WDR70Q9NW82 654 aa15.81■□□□□ 0.12
AC078880.1-201ENST00000546696 DPYSL4O14531 572 aa15.8■□□□□ 0.12
AC078880.1-201ENST00000546696 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
AC078880.1-201ENST00000546696 E2F4Q16254 413 aa15.77■□□□□ 0.12
AC078880.1-201ENST00000546696 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
AC078880.1-201ENST00000546696 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
AC078880.1-201ENST00000546696 ZDHHC16Q969W1 377 aa15.74■□□□□ 0.11
AC078880.1-201ENST00000546696 TK2O00142 265 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 HRO43593 1189 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 ADAM33Q9BZ11 813 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 PCDHGA10Q9Y5H3 936 aa15.7■□□□□ 0.1
AC078880.1-201ENST00000546696 PTPREP23469 700 aa15.69■□□□□ 0.1
AC078880.1-201ENST00000546696 PHF14O94880 888 aa15.68■□□□□ 0.1
AC078880.1-201ENST00000546696 ARIH1Q9Y4X5 557 aaPredicted RBP15.68■□□□□ 0.1
AC078880.1-201ENST00000546696 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
AC078880.1-201ENST00000546696 PDIA6Q15084 440 aa15.66■□□□□ 0.1
AC078880.1-201ENST00000546696 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
AC078880.1-201ENST00000546696 SPDYE16A6NNV3 312 aaPredicted RBP15.65■□□□□ 0.1
AC078880.1-201ENST00000546696 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
AC078880.1-201ENST00000546696 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
AC078880.1-201ENST00000546696 EPAS1Q99814 870 aa15.63■□□□□ 0.09
AC078880.1-201ENST00000546696 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms