RNA–Protein interactions for RNA: ENST00000546442.5

FGD4-213, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5 BASIC

Gene FGD4, Length 3,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-213ENST00000546442 TROQ12816 1431 aaPredicted RBP7.3□□□□□ -1.24
FGD4-213ENST00000546442 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
FGD4-213ENST00000546442 DEPDC5O75140 1603 aa7.29□□□□□ -1.24
FGD4-213ENST00000546442 FBLN2P98095 1184 aa7.29□□□□□ -1.24
FGD4-213ENST00000546442 PLCH2O75038 1416 aa7.29□□□□□ -1.24
FGD4-213ENST00000546442 CEP162Q5TB80 1403 aa7.29□□□□□ -1.24
FGD4-213ENST00000546442 RNF17Q9BXT8 1623 aaKnown RBP7.29□□□□□ -1.24
FGD4-213ENST00000546442 HECW2Q9P2P5 1572 aa7.28□□□□□ -1.24
FGD4-213ENST00000546442 ARHGEF12Q9NZN5 1544 aa7.28□□□□□ -1.24
FGD4-213ENST00000546442 SUPT6HQ7KZ85 1726 aaKnown RBP7.28□□□□□ -1.24
FGD4-213ENST00000546442 EIF2AK4Q9P2K8 1649 aaKnown RBP7.28□□□□□ -1.24
FGD4-213ENST00000546442 ZFYVE16Q7Z3T8 1539 aa7.27□□□□□ -1.25
FGD4-213ENST00000546442 TCOF1Q13428 1488 aaKnown RBP7.27□□□□□ -1.25
FGD4-213ENST00000546442 POGZQ7Z3K3 1410 aa7.27□□□□□ -1.25
FGD4-213ENST00000546442 MLH3Q9UHC1 1453 aa7.26□□□□□ -1.25
FGD4-213ENST00000546442 MROH1Q8NDA8 1641 aa7.26□□□□□ -1.25
FGD4-213ENST00000546442 MBD5Q9P267 1494 aa7.26□□□□□ -1.25
FGD4-213ENST00000546442 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
FGD4-213ENST00000546442 KIAA1107Q9UPP5 1409 aa7.25□□□□□ -1.25
FGD4-213ENST00000546442 GPATCH8Q9UKJ3 1502 aaKnown RBP7.25□□□□□ -1.25
FGD4-213ENST00000546442 VPS8Q8N3P4 1428 aa7.25□□□□□ -1.25
FGD4-213ENST00000546442 VWDEQ8N2E2 1590 aa7.24□□□□□ -1.25
FGD4-213ENST00000546442 CLIP1P30622 1438 aa7.24□□□□□ -1.25
FGD4-213ENST00000546442 TTBK1Q5TCY1 1321 aaPredicted RBP7.24□□□□□ -1.25
FGD4-213ENST00000546442 FER1L4A9Z1Z3 1794 aa7.24□□□□□ -1.25
FGD4-213ENST00000546442 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
FGD4-213ENST00000546442 ZC3H13Q5T200 1668 aaKnown RBP7.23□□□□□ -1.25
FGD4-213ENST00000546442 CD109Q6YHK3 1445 aa7.23□□□□□ -1.25
FGD4-213ENST00000546442 KDM5DQ9BY66 1539 aa7.22□□□□□ -1.25
FGD4-213ENST00000546442 DNMT1P26358 1616 aaKnown RBP7.22□□□□□ -1.25
FGD4-213ENST00000546442 RANGAP1P46060 587 aaPredicted RBP7.22□□□□□ -1.25
FGD4-213ENST00000546442 LRRC9Q6ZRR7 1453 aa7.22□□□□□ -1.25
FGD4-213ENST00000546442 SHANK2Q9UPX8 1470 aa7.22□□□□□ -1.25
FGD4-213ENST00000546442 KDM5AP29375 1690 aaKnown RBP7.22□□□□□ -1.25
FGD4-213ENST00000546442 FANCAO15360 1455 aa7.21□□□□□ -1.25
FGD4-213ENST00000546442 CAMSAP2Q08AD1 1489 aa7.2□□□□□ -1.26
FGD4-213ENST00000546442 PLPPR3Q6T4P5 718 aa7.2□□□□□ -1.26
FGD4-213ENST00000546442 AKNAQ7Z591 1439 aa7.2□□□□□ -1.26
FGD4-213ENST00000546442 ZNF518AQ6AHZ1 1483 aa7.19□□□□□ -1.26
FGD4-213ENST00000546442 RTEL1-TNFRSF6BF6WH68 1400 aa7.19□□□□□ -1.26
FGD4-213ENST00000546442 C3P01024 1663 aa7.18□□□□□ -1.26
FGD4-213ENST00000546442 MADDQ8WXG6 1647 aa7.18□□□□□ -1.26
FGD4-213ENST00000546442 ADGRL2O95490 1459 aa7.18□□□□□ -1.26
FGD4-213ENST00000546442 PRDM15P57071 1507 aaPredicted RBP7.18□□□□□ -1.26
FGD4-213ENST00000546442 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 ATP7AQ04656 1500 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 SYCP2Q9BX26 1530 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 MIA2Q96PC5 1412 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 UNC13BO14795 1591 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 PREX1Q8TCU6 1659 aa7.17□□□□□ -1.26
FGD4-213ENST00000546442 NCOA2Q15596 1464 aa7.16□□□□□ -1.26
FGD4-213ENST00000546442 LMTK2Q8IWU2 1503 aa7.16□□□□□ -1.26
FGD4-213ENST00000546442 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
FGD4-213ENST00000546442 ADGRL1O94910 1474 aa7.16□□□□□ -1.26
FGD4-213ENST00000546442 PTPN23Q9H3S7 1636 aa7.15□□□□□ -1.26
FGD4-213ENST00000546442 GCC2Q8IWJ2 1684 aa7.15□□□□□ -1.27
FGD4-213ENST00000546442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.27
FGD4-213ENST00000546442 C9orf84Q5VXU9 1444 aa7.14□□□□□ -1.27
FGD4-213ENST00000546442 PIK3C2BO00750 1634 aa7.13□□□□□ -1.27
FGD4-213ENST00000546442 STRCQ7RTU9 1775 aa7.13□□□□□ -1.27
FGD4-213ENST00000546442 FAM69CQ0P6D2 419 aa7.13□□□□□ -1.27
FGD4-213ENST00000546442 ATP10AO60312 1499 aa7.13□□□□□ -1.27
FGD4-213ENST00000546442 ARHGAP5Q13017 1502 aa7.12□□□□□ -1.27
FGD4-213ENST00000546442 TRAPPC8Q9Y2L5 1435 aa7.12□□□□□ -1.27
FGD4-213ENST00000546442 RIMS1Q86UR5 1692 aaKnown RBP7.12□□□□□ -1.27
FGD4-213ENST00000546442 MYO3AQ8NEV4 1616 aa7.11□□□□□ -1.27
FGD4-213ENST00000546442 YEATS2Q9ULM3 1422 aa7.11□□□□□ -1.27
FGD4-213ENST00000546442 SPATA31D1Q6ZQQ2 1576 aa7.1□□□□□ -1.27
FGD4-213ENST00000546442 CAMSAP1Q5T5Y3 1602 aa7.1□□□□□ -1.27
FGD4-213ENST00000546442 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
FGD4-213ENST00000546442 IQGAP3Q86VI3 1631 aa7.1□□□□□ -1.27
FGD4-213ENST00000546442 CCDC141Q6ZP82 1450 aa7.09□□□□□ -1.27
FGD4-213ENST00000546442 NEURL4Q96JN8 1562 aa7.09□□□□□ -1.27
FGD4-213ENST00000546442 LMTK3Q96Q04 1460 aa7.09□□□□□ -1.27
FGD4-213ENST00000546442 KDM4FA0A1W2PPD8 638 aa7.09□□□□□ -1.28
FGD4-213ENST00000546442 CLTCQ00610 1675 aaKnown RBP7.08□□□□□ -1.28
FGD4-213ENST00000546442 RRBP1Q9P2E9 1410 aaKnown RBP7.08□□□□□ -1.28
FGD4-213ENST00000546442 PTPRMP28827 1452 aa7.08□□□□□ -1.28
FGD4-213ENST00000546442 POLR1AO95602 1720 aaPredicted RBP7.07□□□□□ -1.28
FGD4-213ENST00000546442 MSH5O43196 834 aa7.07□□□□□ -1.28
FGD4-213ENST00000546442 DUOX2Q9NRD8 1548 aa7.07□□□□□ -1.28
FGD4-213ENST00000546442 NPATQ14207 1427 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 SCAPERQ9BY12 1400 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 CEP152O94986 1710 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 ERBINQ96RT1 1412 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 TET3O43151 1660 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 ABCC3O15438 1527 aa7.06□□□□□ -1.28
FGD4-213ENST00000546442 NPM1P06748 294 aaKnown RBP eCLIP7.05□□□□□ -1.28
FGD4-213ENST00000546442 UBR1Q8IWV7 1749 aa7.05□□□□□ -1.28
FGD4-213ENST00000546442 ARHGAP31Q2M1Z3 1444 aa7.05□□□□□ -1.28
FGD4-213ENST00000546442 ABCC5O15440 1437 aa7.05□□□□□ -1.28
FGD4-213ENST00000546442 FGD6Q6ZV73 1430 aa7.05□□□□□ -1.28
FGD4-213ENST00000546442 IFT172Q9UG01 1749 aa7.04□□□□□ -1.28
FGD4-213ENST00000546442 SETD1AO15047 1707 aaKnown RBP7.04□□□□□ -1.28
FGD4-213ENST00000546442 EFCAB6Q5THR3 1501 aa7.03□□□□□ -1.28
FGD4-213ENST00000546442 UGGT1Q9NYU2 1555 aa7.03□□□□□ -1.28
FGD4-213ENST00000546442 A2MP01023 1474 aa7.03□□□□□ -1.28
FGD4-213ENST00000546442 DAPK1P53355 1430 aa7.03□□□□□ -1.28
FGD4-213ENST00000546442 SYNMO15061 1565 aa7.03□□□□□ -1.28
FGD4-213ENST00000546442 E9PCH4 1651 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms