RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
SNHG1-218ENST00000541615 TTLL13PA6NNM8 815 aa7.1□□□□□ -1.27
SNHG1-218ENST00000541615 A0A0U1RQG5 324 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-218ENST00000541615 POTEFA5A3E0 1075 aa7.09□□□□□ -1.27
SNHG1-218ENST00000541615 POTEMA6NI47 508 aa7.09□□□□□ -1.27
SNHG1-218ENST00000541615 FAM212AQ96EL1 285 aa7.09□□□□□ -1.27
SNHG1-218ENST00000541615 ARID3AQ99856 593 aa7.09□□□□□ -1.27
SNHG1-218ENST00000541615 PCDHB13Q9Y5F0 798 aa7.09□□□□□ -1.27
SNHG1-218ENST00000541615 IER5LQ5T953 404 aa7.08□□□□□ -1.28
SNHG1-218ENST00000541615 C14orf37Q86TY3 774 aa7.08□□□□□ -1.28
SNHG1-218ENST00000541615 FAM43AQ8N2R8 423 aa7.08□□□□□ -1.28
SNHG1-218ENST00000541615 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-218ENST00000541615 CHMP4AQ9BY43 222 aa7.07□□□□□ -1.28
SNHG1-218ENST00000541615 NOP58Q9Y2X3 529 aaKnown RBP7.07□□□□□ -1.28
SNHG1-218ENST00000541615 POTEGQ6S5H5 508 aa7.06□□□□□ -1.28
SNHG1-218ENST00000541615 IPO4Q8TEX9 1081 aaKnown RBP7.06□□□□□ -1.28
SNHG1-218ENST00000541615 TRIM35Q9UPQ4 493 aa7.06□□□□□ -1.28
SNHG1-218ENST00000541615 CENPJQ9HC77 1338 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-218ENST00000541615 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
SNHG1-218ENST00000541615 SEC24BO95487 1268 aa7.05□□□□□ -1.28
SNHG1-218ENST00000541615 IL27Q8NEV9 243 aa7.05□□□□□ -1.28
SNHG1-218ENST00000541615 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
SNHG1-218ENST00000541615 PCDH10Q9P2E7 1040 aa7.05□□□□□ -1.28
SNHG1-218ENST00000541615 ARID4BQ4LE39 1312 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-218ENST00000541615 CALD1Q05682 793 aaKnown RBP7.04□□□□□ -1.28
SNHG1-218ENST00000541615 CNGB1Q14028 1251 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-218ENST00000541615 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
SNHG1-218ENST00000541615 TAOK2Q9UL54 1235 aa7.04□□□□□ -1.28
SNHG1-218ENST00000541615 COLQQ9Y215 455 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-218ENST00000541615 WASHC2AQ641Q2 1341 aa7.02□□□□□ -1.28
SNHG1-218ENST00000541615 HSP90AA1P07900 732 aaKnown RBP7.02□□□□□ -1.29
SNHG1-218ENST00000541615 NAP1L2Q9ULW6 460 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-218ENST00000541615 VGFO15240 615 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-218ENST00000541615 PPM1GO15355 546 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-218ENST00000541615 ANP32BQ92688 251 aaKnown RBP7.01□□□□□ -1.29
SNHG1-218ENST00000541615 BCANQ96GW7 911 aa7.01□□□□□ -1.29
SNHG1-218ENST00000541615 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
SNHG1-218ENST00000541615 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
SNHG1-218ENST00000541615 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
SNHG1-218ENST00000541615 TMEM106CQ9BVX2 250 aa7□□□□□ -1.29
SNHG1-218ENST00000541615 DCAF8Q5TAQ9 597 aa6.98□□□□□ -1.29
SNHG1-218ENST00000541615 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
SNHG1-218ENST00000541615 FAM163AQ96GL9 167 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-218ENST00000541615 ANP32AP39687 249 aaKnown RBP6.97□□□□□ -1.29
SNHG1-218ENST00000541615 PYGBP11216 843 aa6.96□□□□□ -1.3
SNHG1-218ENST00000541615 PLCG2P16885 1265 aa6.96□□□□□ -1.3
SNHG1-218ENST00000541615 PTMSP20962 102 aa6.96□□□□□ -1.3
SNHG1-218ENST00000541615 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-218ENST00000541615 CHRM1P11229 460 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-218ENST00000541615 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-218ENST00000541615 PAXIP1Q6ZW49 1069 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-218ENST00000541615 BBXQ8WY36 941 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-218ENST00000541615 PDCL3Q9H2J4 239 aa6.95□□□□□ -1.3
SNHG1-218ENST00000541615 NEFMP07197 916 aa6.94□□□□□ -1.3
SNHG1-218ENST00000541615 GSE1Q14687 1217 aa6.94□□□□□ -1.3
SNHG1-218ENST00000541615 DHX37Q8IY37 1157 aaKnown RBP6.94□□□□□ -1.3
SNHG1-218ENST00000541615 MAP7D2Q96T17 732 aa6.94□□□□□ -1.3
SNHG1-218ENST00000541615 NBR1Q14596 966 aa6.93□□□□□ -1.3
SNHG1-218ENST00000541615 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
SNHG1-218ENST00000541615 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
SNHG1-218ENST00000541615 HAP1P54257 671 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-218ENST00000541615 TAF3Q5VWG9 929 aa6.92□□□□□ -1.3
SNHG1-218ENST00000541615 PTMAP06454 111 aaKnown RBP6.91□□□□□ -1.3
SNHG1-218ENST00000541615 ZNF467Q7Z7K2 595 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-218ENST00000541615 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
SNHG1-218ENST00000541615 PCDHB8Q9UN66 801 aa6.91□□□□□ -1.3
SNHG1-218ENST00000541615 TNNT2P45379 298 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-218ENST00000541615 CLGNO14967 610 aa6.89□□□□□ -1.31
SNHG1-218ENST00000541615 TPM2P07951 284 aa6.89□□□□□ -1.31
SNHG1-218ENST00000541615 AXDND1Q5T1B0 1012 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-218ENST00000541615 MTERF4Q7Z6M4 381 aaKnown RBP6.89□□□□□ -1.31
SNHG1-218ENST00000541615 PRDM4Q9UKN5 801 aa6.89□□□□□ -1.31
SNHG1-218ENST00000541615 SUPT5HO00267 1087 aaKnown RBP6.88□□□□□ -1.31
SNHG1-218ENST00000541615 TPRNQ4KMQ1 711 aa6.88□□□□□ -1.31
SNHG1-218ENST00000541615 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-218ENST00000541615 SMAP1Q8IYB5 467 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-218ENST00000541615 CCDC9Q9Y3X0 531 aaKnown RBP6.87□□□□□ -1.31
SNHG1-218ENST00000541615 LAS1LQ9Y4W2 734 aaKnown RBP6.87□□□□□ -1.31
SNHG1-218ENST00000541615 SHROOM4Q9ULL8 1493 aa6.86□□□□□ -1.31
SNHG1-218ENST00000541615 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
SNHG1-218ENST00000541615 CLSTN1O94985 981 aa6.86□□□□□ -1.31
SNHG1-218ENST00000541615 UTP14CQ5TAP6 766 aaKnown RBP6.86□□□□□ -1.31
SNHG1-218ENST00000541615 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-218ENST00000541615 STAC3Q96MF2 364 aa6.86□□□□□ -1.31
SNHG1-218ENST00000541615 ST18O60284 1047 aa6.85□□□□□ -1.31
SNHG1-218ENST00000541615 TICAM2Q86XR7 235 aa6.85□□□□□ -1.31
SNHG1-218ENST00000541615 TRIM44Q96DX7 344 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-218ENST00000541615 POLR3GLQ9BT43 218 aa6.85□□□□□ -1.31
SNHG1-218ENST00000541615 PNNQ9H307 717 aaKnown RBP6.85□□□□□ -1.31
SNHG1-218ENST00000541615 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.85□□□□□ -1.31
SNHG1-218ENST00000541615 SNPHO15079 494 aa6.84□□□□□ -1.31
SNHG1-218ENST00000541615 MCCP23508 829 aa6.84□□□□□ -1.31
SNHG1-218ENST00000541615 GOLGA2Q08379 1002 aa6.84□□□□□ -1.31
SNHG1-218ENST00000541615 MKRN3Q13064 507 aaKnown RBP6.84□□□□□ -1.31
SNHG1-218ENST00000541615 L1TD1Q5T7N2 865 aaKnown RBP6.84□□□□□ -1.31
SNHG1-218ENST00000541615 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.31
SNHG1-218ENST00000541615 TMEM121BQ9BXQ6 578 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-218ENST00000541615 CHMP4BQ9H444 224 aaKnown RBP6.84□□□□□ -1.31
SNHG1-218ENST00000541615 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
SNHG1-218ENST00000541615 CDAN1Q8IWY9 1227 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms