RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
KNTC1-212ENST00000541466 RNF25Q96BH1 459 aaPredicted RBP7.97□□□□□ -1.13
KNTC1-212ENST00000541466 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
KNTC1-212ENST00000541466 PHF8Q9UPP1 1060 aa7.94□□□□□ -1.14
KNTC1-212ENST00000541466 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
KNTC1-212ENST00000541466 PKD2Q13563 968 aa7.93□□□□□ -1.14
KNTC1-212ENST00000541466 STK24Q9Y6E0 443 aa7.93□□□□□ -1.14
KNTC1-212ENST00000541466 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
KNTC1-212ENST00000541466 MICALL2Q8IY33 904 aa7.92□□□□□ -1.14
KNTC1-212ENST00000541466 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
KNTC1-212ENST00000541466 NLRP6P59044 892 aa7.91□□□□□ -1.14
KNTC1-212ENST00000541466 ANKRD13DQ6ZTN6 518 aa7.9□□□□□ -1.14
KNTC1-212ENST00000541466 STK25O00506 426 aa7.89□□□□□ -1.15
KNTC1-212ENST00000541466 DCAF8L2P0C7V8 631 aa7.89□□□□□ -1.15
KNTC1-212ENST00000541466 MS4A4AQ96JQ5 239 aa7.89□□□□□ -1.15
KNTC1-212ENST00000541466 TMEM92Q6UXU6 159 aa7.86□□□□□ -1.15
KNTC1-212ENST00000541466 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
KNTC1-212ENST00000541466 ZSWIM6Q9HCJ5 1215 aa7.85□□□□□ -1.15
KNTC1-212ENST00000541466 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
KNTC1-212ENST00000541466 FBXO22Q8NEZ5 403 aa7.82□□□□□ -1.16
KNTC1-212ENST00000541466 RGL2O15211 777 aa7.81□□□□□ -1.16
KNTC1-212ENST00000541466 MFRPQ9BY79 579 aa7.81□□□□□ -1.16
KNTC1-212ENST00000541466 HCSTQ9UBK5 93 aa7.81□□□□□ -1.16
KNTC1-212ENST00000541466 ARSIQ5FYB1 569 aa7.78□□□□□ -1.16
KNTC1-212ENST00000541466 C2orf72A6NCS6 295 aa7.74□□□□□ -1.17
KNTC1-212ENST00000541466 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
KNTC1-212ENST00000541466 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
KNTC1-212ENST00000541466 KHSRPQ92945 711 aaKnown RBP eCLIP7.72□□□□□ -1.171e-7■□□□□ 10
KNTC1-212ENST00000541466 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
KNTC1-212ENST00000541466 IRX2Q9BZI1 471 aaPredicted RBP7.7□□□□□ -1.18
KNTC1-212ENST00000541466 KIF3CO14782 793 aa7.69□□□□□ -1.18
KNTC1-212ENST00000541466 CHGAP10645 457 aaKnown RBP7.69□□□□□ -1.18
KNTC1-212ENST00000541466 PPP1R37O75864 691 aa7.68□□□□□ -1.18
KNTC1-212ENST00000541466 RGS20O76081 388 aa7.68□□□□□ -1.18
KNTC1-212ENST00000541466 NUDT7P0C024 238 aa7.68□□□□□ -1.18
KNTC1-212ENST00000541466 PBX2P40425 430 aa7.68□□□□□ -1.18
KNTC1-212ENST00000541466 HS6ST3Q8IZP7 471 aa7.65□□□□□ -1.18
KNTC1-212ENST00000541466 AXIN2Q9Y2T1 843 aa7.65□□□□□ -1.18
KNTC1-212ENST00000541466 PCDHGA4Q9Y5G9 962 aa7.65□□□□□ -1.18
KNTC1-212ENST00000541466 SLC34A2O95436 690 aa7.64□□□□□ -1.19
KNTC1-212ENST00000541466 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.63□□□□□ -1.19
KNTC1-212ENST00000541466 LHX6Q9UPM6 363 aa7.63□□□□□ -1.19
KNTC1-212ENST00000541466 BBXQ8WY36 941 aaPredicted RBP7.62□□□□□ -1.19
KNTC1-212ENST00000541466 ADGRD1Q6QNK2 874 aa7.6□□□□□ -1.19
KNTC1-212ENST00000541466 TBC1D12O60347 775 aa7.59□□□□□ -1.19
KNTC1-212ENST00000541466 PLPP6Q8IY26 295 aa7.59□□□□□ -1.19
KNTC1-212ENST00000541466 GPHNQ9NQX3 736 aaPredicted RBP7.58□□□□□ -1.2
KNTC1-212ENST00000541466 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
KNTC1-212ENST00000541466 PSDA5PKW4 1024 aaPredicted RBP7.57□□□□□ -1.2
KNTC1-212ENST00000541466 FOXK1P85037 733 aa7.57□□□□□ -1.2
KNTC1-212ENST00000541466 IFFO2Q5TF58 517 aa7.57□□□□□ -1.2
KNTC1-212ENST00000541466 PLCB2Q00722 1185 aa7.56□□□□□ -1.2
KNTC1-212ENST00000541466 PTCD2Q8WV60 388 aaKnown RBP7.56□□□□□ -1.2
KNTC1-212ENST00000541466 HRO43593 1189 aa7.55□□□□□ -1.2
KNTC1-212ENST00000541466 SLC24A1O60721 1099 aa7.55□□□□□ -1.2
KNTC1-212ENST00000541466 DSG2Q14126 1118 aa7.55□□□□□ -1.2
KNTC1-212ENST00000541466 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
KNTC1-212ENST00000541466 ARHGAP33O14559 1287 aa7.54□□□□□ -1.2
KNTC1-212ENST00000541466 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
KNTC1-212ENST00000541466 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
KNTC1-212ENST00000541466 DNAJC5Q9H3Z4 198 aa7.53□□□□□ -1.2
KNTC1-212ENST00000541466 A0A0G2JS52 829 aa7.52□□□□□ -1.21
KNTC1-212ENST00000541466 TK2O00142 265 aa7.52□□□□□ -1.21
KNTC1-212ENST00000541466 NKX1-1Q15270 411 aaPredicted RBP7.52□□□□□ -1.21
KNTC1-212ENST00000541466 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
KNTC1-212ENST00000541466 PPP4R3BQ5MIZ7 849 aa7.51□□□□□ -1.21
KNTC1-212ENST00000541466 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
KNTC1-212ENST00000541466 PDE4AP27815 886 aa7.5□□□□□ -1.21
KNTC1-212ENST00000541466 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
KNTC1-212ENST00000541466 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
KNTC1-212ENST00000541466 KCNH8Q96L42 1107 aa7.5□□□□□ -1.21
KNTC1-212ENST00000541466 Q6ZNB5 142 aa7.49□□□□□ -1.21
KNTC1-212ENST00000541466 PSEN2P49810 448 aa7.48□□□□□ -1.21
KNTC1-212ENST00000541466 KDM4FA0A1W2PPD8 638 aa7.47□□□□□ -1.21
KNTC1-212ENST00000541466 DMRTA1Q5VZB9 504 aa7.47□□□□□ -1.21
KNTC1-212ENST00000541466 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.22
KNTC1-212ENST00000541466 PTPN5P54829 565 aa7.45□□□□□ -1.22
KNTC1-212ENST00000541466 OXER1Q8TDS5 423 aa7.45□□□□□ -1.22
KNTC1-212ENST00000541466 CRISPLD2Q9H0B8 497 aa7.45□□□□□ -1.22
KNTC1-212ENST00000541466 GTPBP6O43824 516 aaPredicted RBP7.44□□□□□ -1.22
KNTC1-212ENST00000541466 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
KNTC1-212ENST00000541466 KCNK17Q96T54 332 aa7.44□□□□□ -1.22
KNTC1-212ENST00000541466 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
KNTC1-212ENST00000541466 LCE2BO14633 110 aa7.41□□□□□ -1.22
KNTC1-212ENST00000541466 MAP3K9P80192 1104 aa7.41□□□□□ -1.22
KNTC1-212ENST00000541466 DDX27Q96GQ7 796 aaKnown RBP7.4□□□□□ -1.22
KNTC1-212ENST00000541466 NCKAP5LQ9HCH0 1330 aa7.4□□□□□ -1.22
KNTC1-212ENST00000541466 EVI5O60447 810 aa7.38□□□□□ -1.23
KNTC1-212ENST00000541466 PTPREP23469 700 aa7.38□□□□□ -1.23
KNTC1-212ENST00000541466 GOLGA8CPA6NN73 597 aa7.37□□□□□ -1.23
KNTC1-212ENST00000541466 FOSBP53539 338 aa7.37□□□□□ -1.23
KNTC1-212ENST00000541466 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
KNTC1-212ENST00000541466 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
KNTC1-212ENST00000541466 VPS9D1Q9Y2B5 631 aa7.37□□□□□ -1.23
KNTC1-212ENST00000541466 ANO8Q9HCE9 1232 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-212ENST00000541466 ZDHHC16Q969W1 377 aa7.35□□□□□ -1.23
KNTC1-212ENST00000541466 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
KNTC1-212ENST00000541466 JPH4Q96JJ6 628 aa7.34□□□□□ -1.23
KNTC1-212ENST00000541466 TRAF7Q6Q0C0 670 aa7.33□□□□□ -1.24
KNTC1-212ENST00000541466 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms