RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
MDM2-227ENST00000540709 ST18O60284 1047 aa10.37□□□□□ -0.75
MDM2-227ENST00000540709 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
MDM2-227ENST00000540709 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
MDM2-227ENST00000540709 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
MDM2-227ENST00000540709 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
MDM2-227ENST00000540709 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
MDM2-227ENST00000540709 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
MDM2-227ENST00000540709 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
MDM2-227ENST00000540709 CFAP44Q96MT7 982 aa10.31□□□□□ -0.76
MDM2-227ENST00000540709 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
MDM2-227ENST00000540709 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
MDM2-227ENST00000540709 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
MDM2-227ENST00000540709 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
MDM2-227ENST00000540709 KIF3CO14782 793 aa10.26□□□□□ -0.77
MDM2-227ENST00000540709 EMP3P54852 163 aa10.24□□□□□ -0.77
MDM2-227ENST00000540709 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
MDM2-227ENST00000540709 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
MDM2-227ENST00000540709 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
MDM2-227ENST00000540709 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
MDM2-227ENST00000540709 PDE4AP27815 886 aa10.2□□□□□ -0.78
MDM2-227ENST00000540709 DSG2Q14126 1118 aa10.2□□□□□ -0.78
MDM2-227ENST00000540709 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
MDM2-227ENST00000540709 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
MDM2-227ENST00000540709 FOXK1P85037 733 aa10.18□□□□□ -0.78
MDM2-227ENST00000540709 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
MDM2-227ENST00000540709 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
MDM2-227ENST00000540709 ERBB3P21860 1342 aa10.16□□□□□ -0.78
MDM2-227ENST00000540709 NCKAP5LQ9HCH0 1330 aa10.16□□□□□ -0.78
MDM2-227ENST00000540709 CRISPLD2Q9H0B8 497 aa10.16□□□□□ -0.78
MDM2-227ENST00000540709 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
MDM2-227ENST00000540709 PPP1R15BQ5SWA1 713 aa10.15□□□□□ -0.78
MDM2-227ENST00000540709 GPR153Q6NV75 609 aa10.15□□□□□ -0.78
MDM2-227ENST00000540709 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
MDM2-227ENST00000540709 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.792e-9■■□□□ 12.5
MDM2-227ENST00000540709 NUDT7P0C024 238 aa10.13□□□□□ -0.79
MDM2-227ENST00000540709 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
MDM2-227ENST00000540709 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
MDM2-227ENST00000540709 PCDHGA4Q9Y5G9 962 aa10.13□□□□□ -0.79
MDM2-227ENST00000540709 SLC34A2O95436 690 aa10.1□□□□□ -0.79
MDM2-227ENST00000540709 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
MDM2-227ENST00000540709 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
MDM2-227ENST00000540709 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
MDM2-227ENST00000540709 TBC1D12O60347 775 aa10.08□□□□□ -0.8
MDM2-227ENST00000540709 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
MDM2-227ENST00000540709 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
MDM2-227ENST00000540709 MFSD10Q14728 455 aa10.03□□□□□ -0.8
MDM2-227ENST00000540709 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
MDM2-227ENST00000540709 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
MDM2-227ENST00000540709 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
MDM2-227ENST00000540709 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
MDM2-227ENST00000540709 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
MDM2-227ENST00000540709 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
MDM2-227ENST00000540709 PLCB2Q00722 1185 aa9.96□□□□□ -0.82
MDM2-227ENST00000540709 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
MDM2-227ENST00000540709 EVI5O60447 810 aa9.95□□□□□ -0.82
MDM2-227ENST00000540709 DPYSL4O14531 572 aa9.93□□□□□ -0.82
MDM2-227ENST00000540709 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
MDM2-227ENST00000540709 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
MDM2-227ENST00000540709 AXIN2Q9Y2T1 843 aa9.93□□□□□ -0.82
MDM2-227ENST00000540709 KDM4FA0A1W2PPD8 638 aa9.92□□□□□ -0.82
MDM2-227ENST00000540709 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
MDM2-227ENST00000540709 E2F4Q16254 413 aa9.92□□□□□ -0.82
MDM2-227ENST00000540709 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
MDM2-227ENST00000540709 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
MDM2-227ENST00000540709 ANKRD13DQ6ZTN6 518 aa9.91□□□□□ -0.82
MDM2-227ENST00000540709 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
MDM2-227ENST00000540709 PPP4R3BQ5MIZ7 849 aa9.9□□□□□ -0.82
MDM2-227ENST00000540709 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
MDM2-227ENST00000540709 SPNS2Q8IVW8 549 aa9.87□□□□□ -0.83
MDM2-227ENST00000540709 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
MDM2-227ENST00000540709 PSEN2P49810 448 aa9.84□□□□□ -0.83
MDM2-227ENST00000540709 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
MDM2-227ENST00000540709 KCNK17Q96T54 332 aa9.84□□□□□ -0.83
MDM2-227ENST00000540709 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
MDM2-227ENST00000540709 PBX2P40425 430 aa9.83□□□□□ -0.84
MDM2-227ENST00000540709 FOSBP53539 338 aa9.83□□□□□ -0.84
MDM2-227ENST00000540709 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
MDM2-227ENST00000540709 DDX12PQ92771 950 aa9.83□□□□□ -0.84
MDM2-227ENST00000540709 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
MDM2-227ENST00000540709 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
MDM2-227ENST00000540709 JPH4Q96JJ6 628 aa9.81□□□□□ -0.84
MDM2-227ENST00000540709 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
MDM2-227ENST00000540709 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
MDM2-227ENST00000540709 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
MDM2-227ENST00000540709 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
MDM2-227ENST00000540709 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
MDM2-227ENST00000540709 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
MDM2-227ENST00000540709 PTPREP23469 700 aa9.77□□□□□ -0.85
MDM2-227ENST00000540709 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
MDM2-227ENST00000540709 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
MDM2-227ENST00000540709 PHF14O94880 888 aa9.76□□□□□ -0.85
MDM2-227ENST00000540709 PDIA6Q15084 440 aa9.76□□□□□ -0.85
MDM2-227ENST00000540709 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
MDM2-227ENST00000540709 NBR1Q14596 966 aa9.74□□□□□ -0.85
MDM2-227ENST00000540709 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
MDM2-227ENST00000540709 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
MDM2-227ENST00000540709 ADGRD1Q6QNK2 874 aa9.73□□□□□ -0.85
MDM2-227ENST00000540709 EPAS1Q99814 870 aa9.73□□□□□ -0.85
MDM2-227ENST00000540709 MYT1LQ9UL68 1186 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms