RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
MDH1-215ENST00000539945 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
MDH1-215ENST00000539945 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
MDH1-215ENST00000539945 NUP160Q12769 1436 aa14.87□□□□□ -0.03
MDH1-215ENST00000539945 CASKIN1Q8WXD9 1431 aa14.87□□□□□ -0.03
MDH1-215ENST00000539945 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
MDH1-215ENST00000539945 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
MDH1-215ENST00000539945 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
MDH1-215ENST00000539945 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
MDH1-215ENST00000539945 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
MDH1-215ENST00000539945 TIAM1Q13009 1591 aa14.83□□□□□ -0.03
MDH1-215ENST00000539945 KANK4Q5T7N3 995 aaPredicted RBP14.83□□□□□ -0.04
MDH1-215ENST00000539945 DISP1Q96F81 1524 aa14.8□□□□□ -0.04
MDH1-215ENST00000539945 CFAP43Q8NDM7 1665 aa14.79□□□□□ -0.04
MDH1-215ENST00000539945 KIAA0556O60303 1618 aa14.78□□□□□ -0.04
MDH1-215ENST00000539945 CHD1O14646 1710 aa14.77□□□□□ -0.05
MDH1-215ENST00000539945 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
MDH1-215ENST00000539945 MNX1P50219 401 aaPredicted RBP14.75□□□□□ -0.05
MDH1-215ENST00000539945 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
MDH1-215ENST00000539945 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
MDH1-215ENST00000539945 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
MDH1-215ENST00000539945 SLC39A7Q92504 469 aa14.74□□□□□ -0.05
MDH1-215ENST00000539945 CARMIL2Q6F5E8 1435 aa14.73□□□□□ -0.05
MDH1-215ENST00000539945 POTEMA6NI47 508 aa14.72□□□□□ -0.05
MDH1-215ENST00000539945 C7P10643 843 aa14.72□□□□□ -0.05
MDH1-215ENST00000539945 HECW1Q76N89 1606 aa14.71□□□□□ -0.05
MDH1-215ENST00000539945 ASTLQ6HA08 431 aaPredicted RBP14.71□□□□□ -0.05
MDH1-215ENST00000539945 MAMSTRQ6ZN01 415 aa14.71□□□□□ -0.05
MDH1-215ENST00000539945 METRNQ9UJH8 293 aa14.71□□□□□ -0.05
MDH1-215ENST00000539945 LRRIQ1Q96JM4 1722 aa14.71□□□□□ -0.05
MDH1-215ENST00000539945 CCDC18Q5T9S5 1454 aa14.7□□□□□ -0.06
MDH1-215ENST00000539945 HRCP23327 699 aa14.69□□□□□ -0.06
MDH1-215ENST00000539945 MS4A3Q96HJ5 214 aa14.69□□□□□ -0.06
MDH1-215ENST00000539945 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
MDH1-215ENST00000539945 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
MDH1-215ENST00000539945 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
MDH1-215ENST00000539945 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
MDH1-215ENST00000539945 POTEGQ6S5H5 508 aa14.66□□□□□ -0.06
MDH1-215ENST00000539945 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
MDH1-215ENST00000539945 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
MDH1-215ENST00000539945 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
MDH1-215ENST00000539945 PCDH10Q9P2E7 1040 aa14.65□□□□□ -0.06
MDH1-215ENST00000539945 MTUS2Q5JR59 1369 aa14.64□□□□□ -0.07
MDH1-215ENST00000539945 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
MDH1-215ENST00000539945 CLASP1Q7Z460 1538 aa14.62□□□□□ -0.07
MDH1-215ENST00000539945 EHBP1L1Q8N3D4 1523 aa14.62□□□□□ -0.07
MDH1-215ENST00000539945 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
MDH1-215ENST00000539945 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
MDH1-215ENST00000539945 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
MDH1-215ENST00000539945 TSPYL2Q9H2G4 693 aaPredicted RBP14.59□□□□□ -0.07
MDH1-215ENST00000539945 ABCA8O94911 1581 aa14.59□□□□□ -0.07
MDH1-215ENST00000539945 CDK13Q14004 1512 aaKnown RBP14.59□□□□□ -0.07
MDH1-215ENST00000539945 MAGI3Q5TCQ9 1506 aa14.59□□□□□ -0.07
MDH1-215ENST00000539945 PLEKHG5O94827 1062 aa14.58□□□□□ -0.07
MDH1-215ENST00000539945 SCUBE2Q9NQ36 999 aa14.58□□□□□ -0.07
MDH1-215ENST00000539945 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.08
MDH1-215ENST00000539945 PTPRGP23470 1445 aa14.57□□□□□ -0.08
MDH1-215ENST00000539945 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
MDH1-215ENST00000539945 NCOA2Q15596 1464 aa14.56□□□□□ -0.08
MDH1-215ENST00000539945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.56□□□□□ -0.08
MDH1-215ENST00000539945 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
MDH1-215ENST00000539945 CDK11AQ9UQ88 783 aaPredicted RBP14.54□□□□□ -0.08
MDH1-215ENST00000539945 MYOM3Q5VTT5 1437 aa14.52□□□□□ -0.08
MDH1-215ENST00000539945 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
MDH1-215ENST00000539945 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.08
MDH1-215ENST00000539945 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.09
MDH1-215ENST00000539945 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
MDH1-215ENST00000539945 PROM2Q8N271 834 aa14.49□□□□□ -0.09
MDH1-215ENST00000539945 ATP10BO94823 1461 aa14.49□□□□□ -0.09
MDH1-215ENST00000539945 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
MDH1-215ENST00000539945 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
MDH1-215ENST00000539945 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
MDH1-215ENST00000539945 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
MDH1-215ENST00000539945 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
MDH1-215ENST00000539945 KIF12Q96FN5 646 aa14.47□□□□□ -0.09
MDH1-215ENST00000539945 MIA2Q96PC5 1412 aa14.46□□□□□ -0.09
MDH1-215ENST00000539945 ADCY10Q96PN6 1610 aa14.45□□□□□ -0.1
MDH1-215ENST00000539945 ABCC2Q92887 1545 aa14.45□□□□□ -0.1
MDH1-215ENST00000539945 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
MDH1-215ENST00000539945 TCOF1Q13428 1488 aaKnown RBP14.44□□□□□ -0.1
MDH1-215ENST00000539945 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
MDH1-215ENST00000539945 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
MDH1-215ENST00000539945 ITGAEP38570 1179 aa14.43□□□□□ -0.1
MDH1-215ENST00000539945 UHRF1BP1LA0JNW5 1464 aa14.43□□□□□ -0.1
MDH1-215ENST00000539945 TIE1P35590 1138 aa14.42□□□□□ -0.1
MDH1-215ENST00000539945 FAM163AQ96GL9 167 aaPredicted RBP14.41□□□□□ -0.1
MDH1-215ENST00000539945 BMP2KQ9NSY1 1161 aaPredicted RBP14.4□□□□□ -0.1
MDH1-215ENST00000539945 KIF14Q15058 1648 aa14.39□□□□□ -0.11
MDH1-215ENST00000539945 MIER1Q8N108 512 aa14.39□□□□□ -0.11
MDH1-215ENST00000539945 SETD5Q9C0A6 1442 aa14.39□□□□□ -0.11
MDH1-215ENST00000539945 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
MDH1-215ENST00000539945 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
MDH1-215ENST00000539945 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
MDH1-215ENST00000539945 ABCC10Q5T3U5 1492 aa14.36□□□□□ -0.11
MDH1-215ENST00000539945 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
MDH1-215ENST00000539945 RAB3GAP2Q9H2M9 1393 aa14.35□□□□□ -0.11
MDH1-215ENST00000539945 SEC24BO95487 1268 aa14.35□□□□□ -0.11
MDH1-215ENST00000539945 MAP3K13O43283 966 aa14.34□□□□□ -0.11
MDH1-215ENST00000539945 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.12
MDH1-215ENST00000539945 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms