RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
DDB1-209ENST00000537877 KCNH8Q96L42 1107 aa18.66■□□□□ 0.58
DDB1-209ENST00000537877 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
DDB1-209ENST00000537877 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
DDB1-209ENST00000537877 PLCH2O75038 1416 aa18.64■□□□□ 0.57
DDB1-209ENST00000537877 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
DDB1-209ENST00000537877 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
DDB1-209ENST00000537877 GLI2P10070 1586 aa18.6■□□□□ 0.57
DDB1-209ENST00000537877 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
DDB1-209ENST00000537877 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
DDB1-209ENST00000537877 DAPK1P53355 1430 aa18.59■□□□□ 0.57
DDB1-209ENST00000537877 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.56
DDB1-209ENST00000537877 ITGAEP38570 1179 aa18.57■□□□□ 0.56
DDB1-209ENST00000537877 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
DDB1-209ENST00000537877 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
DDB1-209ENST00000537877 AKNAQ7Z591 1439 aa18.56■□□□□ 0.56
DDB1-209ENST00000537877 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
DDB1-209ENST00000537877 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
DDB1-209ENST00000537877 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
DDB1-209ENST00000537877 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
DDB1-209ENST00000537877 ABCC1P33527 1531 aa18.55■□□□□ 0.56
DDB1-209ENST00000537877 ABCC5O15440 1437 aa18.55■□□□□ 0.56
DDB1-209ENST00000537877 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
DDB1-209ENST00000537877 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
DDB1-209ENST00000537877 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
DDB1-209ENST00000537877 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
DDB1-209ENST00000537877 FANCAO15360 1455 aa18.54■□□□□ 0.56
DDB1-209ENST00000537877 CD109Q6YHK3 1445 aa18.53■□□□□ 0.56
DDB1-209ENST00000537877 MBD5Q9P267 1494 aa18.53■□□□□ 0.56
DDB1-209ENST00000537877 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
DDB1-209ENST00000537877 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
DDB1-209ENST00000537877 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
DDB1-209ENST00000537877 HFM1A2PYH4 1435 aa18.52■□□□□ 0.55
DDB1-209ENST00000537877 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
DDB1-209ENST00000537877 ADGRL2O95490 1459 aa18.5■□□□□ 0.55
DDB1-209ENST00000537877 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
DDB1-209ENST00000537877 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
DDB1-209ENST00000537877 MAST1Q9Y2H9 1570 aa18.49■□□□□ 0.55
DDB1-209ENST00000537877 NEO1Q92859 1461 aa18.47■□□□□ 0.55
DDB1-209ENST00000537877 ARHGEF12Q9NZN5 1544 aa18.47■□□□□ 0.55
DDB1-209ENST00000537877 NAIPQ13075 1403 aa18.46■□□□□ 0.55
DDB1-209ENST00000537877 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
DDB1-209ENST00000537877 ADGRL1O94910 1474 aa18.45■□□□□ 0.54
DDB1-209ENST00000537877 KIF13AQ9H1H9 1805 aa18.45■□□□□ 0.54
DDB1-209ENST00000537877 HNRNPMP52272 730 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDB1-209ENST00000537877 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
DDB1-209ENST00000537877 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
DDB1-209ENST00000537877 HRCP23327 699 aa18.42■□□□□ 0.54
DDB1-209ENST00000537877 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
DDB1-209ENST00000537877 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
DDB1-209ENST00000537877 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
DDB1-209ENST00000537877 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
DDB1-209ENST00000537877 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
DDB1-209ENST00000537877 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
DDB1-209ENST00000537877 TEX14Q8IWB6 1497 aa18.4■□□□□ 0.54
DDB1-209ENST00000537877 PPRC1Q5VV67 1664 aaKnown RBP18.4■□□□□ 0.54
DDB1-209ENST00000537877 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.54
DDB1-209ENST00000537877 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.54
DDB1-209ENST00000537877 ZNF518AQ6AHZ1 1483 aa18.38■□□□□ 0.53
DDB1-209ENST00000537877 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
DDB1-209ENST00000537877 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
DDB1-209ENST00000537877 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
DDB1-209ENST00000537877 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
DDB1-209ENST00000537877 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
DDB1-209ENST00000537877 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
DDB1-209ENST00000537877 KDM5CP41229 1560 aa18.35■□□□□ 0.53
DDB1-209ENST00000537877 TSPOAP1O95153 1857 aa18.34■□□□□ 0.53
DDB1-209ENST00000537877 ATP7AQ04656 1500 aa18.33■□□□□ 0.53
DDB1-209ENST00000537877 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
DDB1-209ENST00000537877 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.53
DDB1-209ENST00000537877 KDM6BO15054 1643 aa18.33■□□□□ 0.52
DDB1-209ENST00000537877 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
DDB1-209ENST00000537877 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
DDB1-209ENST00000537877 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
DDB1-209ENST00000537877 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
DDB1-209ENST00000537877 DUOX2Q9NRD8 1548 aa18.3■□□□□ 0.52
DDB1-209ENST00000537877 ANKRD50Q9ULJ7 1429 aa18.3■□□□□ 0.52
DDB1-209ENST00000537877 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
DDB1-209ENST00000537877 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
DDB1-209ENST00000537877 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
DDB1-209ENST00000537877 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
DDB1-209ENST00000537877 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
DDB1-209ENST00000537877 ZMYM4Q5VZL5 1548 aa18.27■□□□□ 0.51
DDB1-209ENST00000537877 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.51
DDB1-209ENST00000537877 FRMPD1Q5SYB0 1578 aa18.26■□□□□ 0.51
DDB1-209ENST00000537877 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
DDB1-209ENST00000537877 UNC13BO14795 1591 aa18.23■□□□□ 0.51
DDB1-209ENST00000537877 EIF2AK4Q9P2K8 1649 aaKnown RBP18.23■□□□□ 0.51
DDB1-209ENST00000537877 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
DDB1-209ENST00000537877 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
DDB1-209ENST00000537877 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
DDB1-209ENST00000537877 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
DDB1-209ENST00000537877 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
DDB1-209ENST00000537877 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
DDB1-209ENST00000537877 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
DDB1-209ENST00000537877 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
DDB1-209ENST00000537877 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
DDB1-209ENST00000537877 A2MP01023 1474 aa18.16■□□□□ 0.5
DDB1-209ENST00000537877 BCORL1Q5H9F3 1711 aa18.16■□□□□ 0.5
DDB1-209ENST00000537877 PZPP20742 1482 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms