RNA–Protein interactions for RNA: ENST00000537369.2

TRAV8-5-201, Transcript of T cell receptor alpha variable 8-5 (pseudogene), humanhuman

BASIC

Gene TRAV8-5, Length 341 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-5-201ENST00000537369 TROQ12816 1431 aaPredicted RBP7.12□□□□□ -1.27
TRAV8-5-201ENST00000537369 KCNH8Q96L42 1107 aa7.12□□□□□ -1.27
TRAV8-5-201ENST00000537369 TEX14Q8IWB6 1497 aa7.11□□□□□ -1.27
TRAV8-5-201ENST00000537369 ABCC1P33527 1531 aa7.1□□□□□ -1.27
TRAV8-5-201ENST00000537369 ZMYM4Q5VZL5 1548 aa7.1□□□□□ -1.27
TRAV8-5-201ENST00000537369 ARHGEF12Q9NZN5 1544 aa7.1□□□□□ -1.27
TRAV8-5-201ENST00000537369 NEO1Q92859 1461 aa7.1□□□□□ -1.27
TRAV8-5-201ENST00000537369 VPS8Q8N3P4 1428 aa7.1□□□□□ -1.27
TRAV8-5-201ENST00000537369 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
TRAV8-5-201ENST00000537369 KIDINS220Q9ULH0 1771 aa7.09□□□□□ -1.27
TRAV8-5-201ENST00000537369 SUPT6HQ7KZ85 1726 aaKnown RBP7.09□□□□□ -1.27
TRAV8-5-201ENST00000537369 FANCAO15360 1455 aa7.09□□□□□ -1.27
TRAV8-5-201ENST00000537369 PLCH2O75038 1416 aa7.09□□□□□ -1.28
TRAV8-5-201ENST00000537369 ABCA6Q8N139 1617 aa7.09□□□□□ -1.28
TRAV8-5-201ENST00000537369 KDM5CP41229 1560 aa7.08□□□□□ -1.28
TRAV8-5-201ENST00000537369 ARHGEF40Q8TER5 1519 aa7.07□□□□□ -1.28
TRAV8-5-201ENST00000537369 GPATCH8Q9UKJ3 1502 aaKnown RBP7.07□□□□□ -1.28
TRAV8-5-201ENST00000537369 ADGBQ8N7X0 1667 aa7.07□□□□□ -1.28
TRAV8-5-201ENST00000537369 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
TRAV8-5-201ENST00000537369 MAP3K1Q13233 1512 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 ADAMTSL3P82987 1691 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 PLEKHD1A6NEE1 506 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 AKNAQ7Z591 1439 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 INO80Q9ULG1 1556 aaPredicted RBP7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 DIP2CQ9Y2E4 1556 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 ARHGAP5Q13017 1502 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 CROCC2H7BZ55 1655 aa7.06□□□□□ -1.28
TRAV8-5-201ENST00000537369 LRRC9Q6ZRR7 1453 aa7.05□□□□□ -1.28
TRAV8-5-201ENST00000537369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.05□□□□□ -1.28
TRAV8-5-201ENST00000537369 HNRNPUL2Q1KMD3 747 aaKnown RBP7.05□□□□□ -1.28
TRAV8-5-201ENST00000537369 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
TRAV8-5-201ENST00000537369 SYCP2Q9BX26 1530 aa7.05□□□□□ -1.28
TRAV8-5-201ENST00000537369 ADGRL1O94910 1474 aa7.04□□□□□ -1.28
TRAV8-5-201ENST00000537369 HECW2Q9P2P5 1572 aa7.04□□□□□ -1.28
TRAV8-5-201ENST00000537369 POGZQ7Z3K3 1410 aa7.04□□□□□ -1.28
TRAV8-5-201ENST00000537369 YEATS2Q9ULM3 1422 aa7.04□□□□□ -1.28
TRAV8-5-201ENST00000537369 NCOA2Q15596 1464 aa7.04□□□□□ -1.28
TRAV8-5-201ENST00000537369 TRAPPC8Q9Y2L5 1435 aa7.03□□□□□ -1.28
TRAV8-5-201ENST00000537369 MADDQ8WXG6 1647 aa7.03□□□□□ -1.28
TRAV8-5-201ENST00000537369 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
TRAV8-5-201ENST00000537369 DENND4BO75064 1496 aaPredicted RBP7.03□□□□□ -1.28
TRAV8-5-201ENST00000537369 ZFYVE16Q7Z3T8 1539 aa7.02□□□□□ -1.29
TRAV8-5-201ENST00000537369 KDM4FA0A1W2PPD8 638 aa7.02□□□□□ -1.29
TRAV8-5-201ENST00000537369 RAPGEF3O95398 923 aa7.02□□□□□ -1.29
TRAV8-5-201ENST00000537369 RIMS1Q86UR5 1692 aaKnown RBP7.02□□□□□ -1.29
TRAV8-5-201ENST00000537369 FER1L4A9Z1Z3 1794 aa7.02□□□□□ -1.29
TRAV8-5-201ENST00000537369 SCAPERQ9BY12 1400 aa7.01□□□□□ -1.29
TRAV8-5-201ENST00000537369 REREQ9P2R6 1566 aa7.01□□□□□ -1.29
TRAV8-5-201ENST00000537369 MBD5Q9P267 1494 aa7.01□□□□□ -1.29
TRAV8-5-201ENST00000537369 PHLDB1Q86UU1 1377 aa7.01□□□□□ -1.29
TRAV8-5-201ENST00000537369 PLXNC1O60486 1568 aa7□□□□□ -1.29
TRAV8-5-201ENST00000537369 CAMSAP2Q08AD1 1489 aa7□□□□□ -1.29
TRAV8-5-201ENST00000537369 CNKSR2Q8WXI2 1034 aa7□□□□□ -1.29
TRAV8-5-201ENST00000537369 ZNF644Q9H582 1327 aaPredicted RBP7□□□□□ -1.29
TRAV8-5-201ENST00000537369 ARHGEF5Q12774 1597 aa6.99□□□□□ -1.29
TRAV8-5-201ENST00000537369 ZNF518AQ6AHZ1 1483 aa6.99□□□□□ -1.29
TRAV8-5-201ENST00000537369 MTUS2Q5JR59 1369 aa6.99□□□□□ -1.29
TRAV8-5-201ENST00000537369 PTPN23Q9H3S7 1636 aa6.99□□□□□ -1.29
TRAV8-5-201ENST00000537369 ATP7AQ04656 1500 aa6.99□□□□□ -1.29
TRAV8-5-201ENST00000537369 MLH3Q9UHC1 1453 aa6.98□□□□□ -1.29
TRAV8-5-201ENST00000537369 C3P01024 1663 aa6.98□□□□□ -1.29
TRAV8-5-201ENST00000537369 MAST1Q9Y2H9 1570 aa6.98□□□□□ -1.29
TRAV8-5-201ENST00000537369 MAGI2Q86UL8 1455 aa6.98□□□□□ -1.29
TRAV8-5-201ENST00000537369 DNMT1P26358 1616 aaKnown RBP6.98□□□□□ -1.29
TRAV8-5-201ENST00000537369 CDK11AQ9UQ88 783 aaPredicted RBP6.97□□□□□ -1.29
TRAV8-5-201ENST00000537369 KIAA1107Q9UPP5 1409 aa6.96□□□□□ -1.3
TRAV8-5-201ENST00000537369 AFAP1Q8N556 730 aa6.96□□□□□ -1.3
TRAV8-5-201ENST00000537369 MROH1Q8NDA8 1641 aa6.96□□□□□ -1.3
TRAV8-5-201ENST00000537369 TCOF1Q13428 1488 aaKnown RBP6.96□□□□□ -1.3
TRAV8-5-201ENST00000537369 CLTCQ00610 1675 aaKnown RBP6.96□□□□□ -1.3
TRAV8-5-201ENST00000537369 CCNB3Q8WWL7 1395 aa6.95□□□□□ -1.3
TRAV8-5-201ENST00000537369 MYOM3Q5VTT5 1437 aa6.95□□□□□ -1.3
TRAV8-5-201ENST00000537369 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
TRAV8-5-201ENST00000537369 ATP10AO60312 1499 aa6.95□□□□□ -1.3
TRAV8-5-201ENST00000537369 AGLP35573 1532 aa6.95□□□□□ -1.3
TRAV8-5-201ENST00000537369 C9orf84Q5VXU9 1444 aa6.94□□□□□ -1.3
TRAV8-5-201ENST00000537369 MROH2AA6NES4 1674 aa6.94□□□□□ -1.3
TRAV8-5-201ENST00000537369 CEP152O94986 1710 aa6.94□□□□□ -1.3
TRAV8-5-201ENST00000537369 HNRNPMP52272 730 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRAV8-5-201ENST00000537369 PLEKHH2Q8IVE3 1493 aa6.93□□□□□ -1.3
TRAV8-5-201ENST00000537369 RNF17Q9BXT8 1623 aaKnown RBP6.93□□□□□ -1.3
TRAV8-5-201ENST00000537369 FGD6Q6ZV73 1430 aa6.93□□□□□ -1.3
TRAV8-5-201ENST00000537369 PTPRMP28827 1452 aa6.92□□□□□ -1.3
TRAV8-5-201ENST00000537369 CCDC141Q6ZP82 1450 aa6.92□□□□□ -1.3
TRAV8-5-201ENST00000537369 DEPDC5O75140 1603 aa6.92□□□□□ -1.3
TRAV8-5-201ENST00000537369 EIF2AK4Q9P2K8 1649 aaKnown RBP6.92□□□□□ -1.3
TRAV8-5-201ENST00000537369 MIA2Q96PC5 1412 aa6.92□□□□□ -1.3
TRAV8-5-201ENST00000537369 CFDP1Q9UEE9 299 aaPredicted RBP6.91□□□□□ -1.3
TRAV8-5-201ENST00000537369 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
TRAV8-5-201ENST00000537369 ABCC5O15440 1437 aa6.91□□□□□ -1.3
TRAV8-5-201ENST00000537369 PTPRKQ15262 1439 aa6.91□□□□□ -1.3
TRAV8-5-201ENST00000537369 PREX1Q8TCU6 1659 aa6.9□□□□□ -1.3
TRAV8-5-201ENST00000537369 RTEL1-TNFRSF6BF6WH68 1400 aa6.9□□□□□ -1.31
TRAV8-5-201ENST00000537369 A2MP01023 1474 aa6.9□□□□□ -1.31
TRAV8-5-201ENST00000537369 STRCQ7RTU9 1775 aa6.9□□□□□ -1.31
TRAV8-5-201ENST00000537369 CFAP65Q6ZU64 1925 aaKnown RBP6.89□□□□□ -1.31
TRAV8-5-201ENST00000537369 MAPK8IP2Q13387 824 aaPredicted RBP6.89□□□□□ -1.31
TRAV8-5-201ENST00000537369 FOXD4L1Q9NU39 408 aa6.89□□□□□ -1.31
TRAV8-5-201ENST00000537369 SCAF1Q9H7N4 1312 aaKnown RBP6.89□□□□□ -1.31
TRAV8-5-201ENST00000537369 DAPK1P53355 1430 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms