RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
UBC-204ENST00000536661 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
UBC-204ENST00000536661 SCAPERQ9BY12 1400 aa24.17■■□□□ 1.46
UBC-204ENST00000536661 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
UBC-204ENST00000536661 ADAMTSL3P82987 1691 aa24.16■■□□□ 1.46
UBC-204ENST00000536661 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
UBC-204ENST00000536661 ZFYVE16Q7Z3T8 1539 aa24.15■■□□□ 1.46
UBC-204ENST00000536661 EFCAB2Q5VUJ9 269 aa24.14■■□□□ 1.45
UBC-204ENST00000536661 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
UBC-204ENST00000536661 YEATS2Q9ULM3 1422 aa24.11■■□□□ 1.45
UBC-204ENST00000536661 MAGI2Q86UL8 1455 aa24.1■■□□□ 1.45
UBC-204ENST00000536661 HECW2Q9P2P5 1572 aa24.08■■□□□ 1.45
UBC-204ENST00000536661 MADDQ8WXG6 1647 aa24.08■■□□□ 1.45
UBC-204ENST00000536661 ITSN2Q9NZM3 1697 aa24.08■■□□□ 1.44
UBC-204ENST00000536661 ABCC1P33527 1531 aa24.07■■□□□ 1.44
UBC-204ENST00000536661 KDM5CP41229 1560 aa24.07■■□□□ 1.44
UBC-204ENST00000536661 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
UBC-204ENST00000536661 ARID4BQ4LE39 1312 aaPredicted RBP24.04■■□□□ 1.44
UBC-204ENST00000536661 PTPRMP28827 1452 aa24.03■■□□□ 1.44
UBC-204ENST00000536661 LOC105371045A0A1W2PR82 267 aa24.02■■□□□ 1.44
UBC-204ENST00000536661 ARHGEF12Q9NZN5 1544 aa24.01■■□□□ 1.43
UBC-204ENST00000536661 RIMS1Q86UR5 1692 aaKnown RBP24.01■■□□□ 1.43
UBC-204ENST00000536661 EHBP1L1Q8N3D4 1523 aa24■■□□□ 1.43
UBC-204ENST00000536661 SAMD9LQ8IVG5 1584 aa24■■□□□ 1.43
UBC-204ENST00000536661 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
UBC-204ENST00000536661 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
UBC-204ENST00000536661 ATP10AO60312 1499 aa23.97■■□□□ 1.43
UBC-204ENST00000536661 C9orf84Q5VXU9 1444 aa23.97■■□□□ 1.43
UBC-204ENST00000536661 ABCA6Q8N139 1617 aa23.97■■□□□ 1.43
UBC-204ENST00000536661 AFAP1Q8N556 730 aa23.97■■□□□ 1.43
UBC-204ENST00000536661 DIP2CQ9Y2E4 1556 aa23.97■■□□□ 1.43
UBC-204ENST00000536661 TRAPPC8Q9Y2L5 1435 aa23.96■■□□□ 1.43
UBC-204ENST00000536661 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
UBC-204ENST00000536661 TIAM1Q13009 1591 aa23.95■■□□□ 1.42
UBC-204ENST00000536661 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
UBC-204ENST00000536661 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
UBC-204ENST00000536661 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
UBC-204ENST00000536661 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
UBC-204ENST00000536661 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
UBC-204ENST00000536661 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
UBC-204ENST00000536661 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.41
UBC-204ENST00000536661 SUPT6HQ7KZ85 1726 aaKnown RBP23.88■■□□□ 1.41
UBC-204ENST00000536661 MLECQ14165 292 aa23.86■■□□□ 1.41
UBC-204ENST00000536661 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
UBC-204ENST00000536661 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
UBC-204ENST00000536661 PLEKHH2Q8IVE3 1493 aa23.84■■□□□ 1.41
UBC-204ENST00000536661 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
UBC-204ENST00000536661 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
UBC-204ENST00000536661 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
UBC-204ENST00000536661 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.45e-20■■■□□ 15.9
UBC-204ENST00000536661 AGLP35573 1532 aa23.79■■□□□ 1.4
UBC-204ENST00000536661 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
UBC-204ENST00000536661 LMTK3Q96Q04 1460 aa23.79■■□□□ 1.4
UBC-204ENST00000536661 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
UBC-204ENST00000536661 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
UBC-204ENST00000536661 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
UBC-204ENST00000536661 ZNF644Q9H582 1327 aaPredicted RBP23.76■■□□□ 1.39
UBC-204ENST00000536661 ILDR1Q86SU0 546 aaPredicted RBP23.75■■□□□ 1.39
UBC-204ENST00000536661 SPAG9O60271 1321 aaKnown RBP23.75■■□□□ 1.39
UBC-204ENST00000536661 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
UBC-204ENST00000536661 PLXNC1O60486 1568 aa23.72■■□□□ 1.39
UBC-204ENST00000536661 ADGBQ8N7X0 1667 aa23.71■■□□□ 1.39
UBC-204ENST00000536661 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
UBC-204ENST00000536661 C3P01024 1663 aa23.7■■□□□ 1.38
UBC-204ENST00000536661 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
UBC-204ENST00000536661 CEBPAP49715 358 aaPredicted RBP23.67■■□□□ 1.38
UBC-204ENST00000536661 HSPA2P54652 639 aa23.67■■□□□ 1.38
UBC-204ENST00000536661 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
UBC-204ENST00000536661 A2MP01023 1474 aa23.66■■□□□ 1.38
UBC-204ENST00000536661 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
UBC-204ENST00000536661 ARHGEF5Q12774 1597 aa23.63■■□□□ 1.37
UBC-204ENST00000536661 MROH2AA6NES4 1674 aa23.62■■□□□ 1.37
UBC-204ENST00000536661 RTEL1-TNFRSF6BF6WH68 1400 aa23.61■■□□□ 1.37
UBC-204ENST00000536661 CLTCQ00610 1675 aaKnown RBP23.59■■□□□ 1.37
UBC-204ENST00000536661 SETD1BQ9UPS6 1966 aaKnown RBP23.58■■□□□ 1.37
UBC-204ENST00000536661 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
UBC-204ENST00000536661 CNTLNQ9NXG0 1405 aa23.58■■□□□ 1.36
UBC-204ENST00000536661 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
UBC-204ENST00000536661 MIA2Q96PC5 1412 aa23.54■■□□□ 1.36
UBC-204ENST00000536661 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
UBC-204ENST00000536661 APLP2Q06481 763 aa23.52■■□□□ 1.36
UBC-204ENST00000536661 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
UBC-204ENST00000536661 UHRF1BP1Q6BDS2 1440 aa23.51■■□□□ 1.35
UBC-204ENST00000536661 DHX29Q7Z478 1369 aaKnown RBP23.5■■□□□ 1.35
UBC-204ENST00000536661 PTPN23Q9H3S7 1636 aa23.48■■□□□ 1.35
UBC-204ENST00000536661 CROCC2H7BZ55 1655 aa23.48■■□□□ 1.35
UBC-204ENST00000536661 GGT6Q6P531 493 aa23.47■■□□□ 1.35
UBC-204ENST00000536661 ZMYM3Q14202 1370 aa23.46■■□□□ 1.35
UBC-204ENST00000536661 STRCQ7RTU9 1775 aa23.45■■□□□ 1.34
UBC-204ENST00000536661 NPATQ14207 1427 aa23.44■■□□□ 1.34
UBC-204ENST00000536661 TSPY4P0CV99 314 aa23.44■■□□□ 1.34
UBC-204ENST00000536661 TSPY10P0CW01 314 aa23.44■■□□□ 1.34
UBC-204ENST00000536661 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
UBC-204ENST00000536661 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
UBC-204ENST00000536661 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
UBC-204ENST00000536661 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
UBC-204ENST00000536661 KIF3BO15066 747 aa23.4■■□□□ 1.34
UBC-204ENST00000536661 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
UBC-204ENST00000536661 DNMT1P26358 1616 aaKnown RBP23.4■■□□□ 1.34
UBC-204ENST00000536661 RNF17Q9BXT8 1623 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms