RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 C7P10643 843 aa13.65□□□□□ -0.22
VPS26B-205ENST00000530402 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
VPS26B-205ENST00000530402 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
VPS26B-205ENST00000530402 MFSD10Q14728 455 aa13.62□□□□□ -0.23
VPS26B-205ENST00000530402 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
VPS26B-205ENST00000530402 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
VPS26B-205ENST00000530402 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
VPS26B-205ENST00000530402 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
VPS26B-205ENST00000530402 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
VPS26B-205ENST00000530402 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
VPS26B-205ENST00000530402 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
VPS26B-205ENST00000530402 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
VPS26B-205ENST00000530402 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
VPS26B-205ENST00000530402 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
VPS26B-205ENST00000530402 DSG2Q14126 1118 aa13.52□□□□□ -0.25
VPS26B-205ENST00000530402 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
VPS26B-205ENST00000530402 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
VPS26B-205ENST00000530402 FOXK1P85037 733 aa13.48□□□□□ -0.25
VPS26B-205ENST00000530402 CAMK2BQ13554 666 aa13.48□□□□□ -0.25
VPS26B-205ENST00000530402 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
VPS26B-205ENST00000530402 PLPP6Q8IY26 295 aa13.46□□□□□ -0.25
VPS26B-205ENST00000530402 KIF3CO14782 793 aa13.43□□□□□ -0.26
VPS26B-205ENST00000530402 SEMA3EO15041 775 aa13.42□□□□□ -0.26
VPS26B-205ENST00000530402 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
VPS26B-205ENST00000530402 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
VPS26B-205ENST00000530402 DPYSL4O14531 572 aa13.38□□□□□ -0.27
VPS26B-205ENST00000530402 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
VPS26B-205ENST00000530402 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
VPS26B-205ENST00000530402 SMYD5Q6GMV2 418 aa13.35□□□□□ -0.27
VPS26B-205ENST00000530402 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
VPS26B-205ENST00000530402 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
VPS26B-205ENST00000530402 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
VPS26B-205ENST00000530402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
VPS26B-205ENST00000530402 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
VPS26B-205ENST00000530402 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
VPS26B-205ENST00000530402 PDIA6Q15084 440 aa13.26□□□□□ -0.29
VPS26B-205ENST00000530402 TBC1D12O60347 775 aa13.24□□□□□ -0.29
VPS26B-205ENST00000530402 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
VPS26B-205ENST00000530402 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
VPS26B-205ENST00000530402 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
VPS26B-205ENST00000530402 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
VPS26B-205ENST00000530402 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
VPS26B-205ENST00000530402 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
VPS26B-205ENST00000530402 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
VPS26B-205ENST00000530402 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
VPS26B-205ENST00000530402 EVI5O60447 810 aa13.17□□□□□ -0.3
VPS26B-205ENST00000530402 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
VPS26B-205ENST00000530402 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
VPS26B-205ENST00000530402 SLC34A2O95436 690 aa13.16□□□□□ -0.3
VPS26B-205ENST00000530402 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
VPS26B-205ENST00000530402 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
VPS26B-205ENST00000530402 DDX12PQ92771 950 aa13.13□□□□□ -0.31
VPS26B-205ENST00000530402 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
VPS26B-205ENST00000530402 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
VPS26B-205ENST00000530402 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
VPS26B-205ENST00000530402 PTGER2P43116 358 aa13.07□□□□□ -0.32
VPS26B-205ENST00000530402 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
VPS26B-205ENST00000530402 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
VPS26B-205ENST00000530402 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
VPS26B-205ENST00000530402 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
VPS26B-205ENST00000530402 OSBPP22059 807 aa13.02□□□□□ -0.33
VPS26B-205ENST00000530402 ZMYND10O75800 440 aa13.01□□□□□ -0.33
VPS26B-205ENST00000530402 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
VPS26B-205ENST00000530402 ARSIQ5FYB1 569 aa13□□□□□ -0.33
VPS26B-205ENST00000530402 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
VPS26B-205ENST00000530402 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
VPS26B-205ENST00000530402 SNPHO15079 494 aa12.97□□□□□ -0.33
VPS26B-205ENST00000530402 PHF14O94880 888 aa12.97□□□□□ -0.33
VPS26B-205ENST00000530402 NUDT7P0C024 238 aa12.97□□□□□ -0.33
VPS26B-205ENST00000530402 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS26B-205ENST00000530402 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
VPS26B-205ENST00000530402 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
VPS26B-205ENST00000530402 EPAS1Q99814 870 aa12.96□□□□□ -0.33
VPS26B-205ENST00000530402 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
VPS26B-205ENST00000530402 MAP3K7O43318 606 aa12.93□□□□□ -0.34
VPS26B-205ENST00000530402 LHX8Q68G74 356 aa12.92□□□□□ -0.34
VPS26B-205ENST00000530402 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
VPS26B-205ENST00000530402 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
VPS26B-205ENST00000530402 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
VPS26B-205ENST00000530402 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
VPS26B-205ENST00000530402 FCHSD2O94868 740 aa12.91□□□□□ -0.34
VPS26B-205ENST00000530402 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
VPS26B-205ENST00000530402 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
VPS26B-205ENST00000530402 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
VPS26B-205ENST00000530402 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
VPS26B-205ENST00000530402 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
VPS26B-205ENST00000530402 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
VPS26B-205ENST00000530402 GPR37O15354 613 aa12.87□□□□□ -0.35
VPS26B-205ENST00000530402 FOSBP53539 338 aa12.87□□□□□ -0.35
VPS26B-205ENST00000530402 HIC1Q14526 733 aa12.87□□□□□ -0.35
VPS26B-205ENST00000530402 AK7Q96M32 723 aa12.87□□□□□ -0.35
VPS26B-205ENST00000530402 GNPATO15228 680 aa12.86□□□□□ -0.35
VPS26B-205ENST00000530402 ZDHHC16Q969W1 377 aa12.85□□□□□ -0.35
VPS26B-205ENST00000530402 PTGDRQ13258 359 aa12.84□□□□□ -0.35
VPS26B-205ENST00000530402 CDHR5Q9HBB8 845 aa12.84□□□□□ -0.35
VPS26B-205ENST00000530402 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
VPS26B-205ENST00000530402 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
VPS26B-205ENST00000530402 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
VPS26B-205ENST00000530402 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
VPS26B-205ENST00000530402 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms