RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
CAPRIN1-208ENST00000530008 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
CAPRIN1-208ENST00000530008 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-208ENST00000530008 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-208ENST00000530008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.426e-8■■□□□ 14.3
CAPRIN1-208ENST00000530008 DPYSL4O14531 572 aa12.43□□□□□ -0.42
CAPRIN1-208ENST00000530008 TIE1P35590 1138 aa12.42□□□□□ -0.42
CAPRIN1-208ENST00000530008 EMILIN3Q9NT22 766 aa12.42□□□□□ -0.42
CAPRIN1-208ENST00000530008 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-208ENST00000530008 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-208ENST00000530008 TTLL13PA6NNM8 815 aa12.4□□□□□ -0.42
CAPRIN1-208ENST00000530008 PDIA6Q15084 440 aa12.4□□□□□ -0.42
CAPRIN1-208ENST00000530008 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-208ENST00000530008 DSG2Q14126 1118 aa12.38□□□□□ -0.43
CAPRIN1-208ENST00000530008 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
CAPRIN1-208ENST00000530008 TRIM66O15016 1216 aa12.36□□□□□ -0.43
CAPRIN1-208ENST00000530008 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
CAPRIN1-208ENST00000530008 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
CAPRIN1-208ENST00000530008 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-208ENST00000530008 PDE4DQ08499 809 aa12.34□□□□□ -0.43
CAPRIN1-208ENST00000530008 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
CAPRIN1-208ENST00000530008 FOXK1P85037 733 aa12.33□□□□□ -0.44
CAPRIN1-208ENST00000530008 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
CAPRIN1-208ENST00000530008 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
CAPRIN1-208ENST00000530008 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
CAPRIN1-208ENST00000530008 GPR37O15354 613 aa12.3□□□□□ -0.44
CAPRIN1-208ENST00000530008 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
CAPRIN1-208ENST00000530008 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
CAPRIN1-208ENST00000530008 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-208ENST00000530008 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
CAPRIN1-208ENST00000530008 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
CAPRIN1-208ENST00000530008 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-208ENST00000530008 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-208ENST00000530008 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
CAPRIN1-208ENST00000530008 KIF3CO14782 793 aa12.21□□□□□ -0.45
CAPRIN1-208ENST00000530008 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
CAPRIN1-208ENST00000530008 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
CAPRIN1-208ENST00000530008 ZMYND15Q9H091 742 aa12.2□□□□□ -0.46
CAPRIN1-208ENST00000530008 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
CAPRIN1-208ENST00000530008 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
CAPRIN1-208ENST00000530008 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
CAPRIN1-208ENST00000530008 IRF6O14896 467 aa12.17□□□□□ -0.46
CAPRIN1-208ENST00000530008 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-208ENST00000530008 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-208ENST00000530008 OSBPP22059 807 aa12.16□□□□□ -0.46
CAPRIN1-208ENST00000530008 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
CAPRIN1-208ENST00000530008 G3V3G9 751 aa12.15□□□□□ -0.46
CAPRIN1-208ENST00000530008 GNPATO15228 680 aa12.15□□□□□ -0.46
CAPRIN1-208ENST00000530008 AMHR2Q16671 573 aa12.15□□□□□ -0.46
CAPRIN1-208ENST00000530008 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
CAPRIN1-208ENST00000530008 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-208ENST00000530008 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
CAPRIN1-208ENST00000530008 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
CAPRIN1-208ENST00000530008 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPRIN1-208ENST00000530008 FCHSD2O94868 740 aa12.12□□□□□ -0.47
CAPRIN1-208ENST00000530008 PTGER2P43116 358 aa12.12□□□□□ -0.47
CAPRIN1-208ENST00000530008 HIC1Q14526 733 aa12.12□□□□□ -0.47
CAPRIN1-208ENST00000530008 IER5LQ5T953 404 aa12.12□□□□□ -0.47
CAPRIN1-208ENST00000530008 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
CAPRIN1-208ENST00000530008 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
CAPRIN1-208ENST00000530008 CLCN6P51797 869 aa12.1□□□□□ -0.47
CAPRIN1-208ENST00000530008 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
CAPRIN1-208ENST00000530008 FECHP22830 423 aa12.09□□□□□ -0.47
CAPRIN1-208ENST00000530008 DDX12PQ92771 950 aa12.09□□□□□ -0.47
CAPRIN1-208ENST00000530008 PLCG2P16885 1265 aa12.06□□□□□ -0.48
CAPRIN1-208ENST00000530008 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-208ENST00000530008 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
CAPRIN1-208ENST00000530008 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
CAPRIN1-208ENST00000530008 TBC1D12O60347 775 aa12.04□□□□□ -0.48
CAPRIN1-208ENST00000530008 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
CAPRIN1-208ENST00000530008 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-208ENST00000530008 EVI5O60447 810 aa12.02□□□□□ -0.49
CAPRIN1-208ENST00000530008 PTGDRQ13258 359 aa12.02□□□□□ -0.49
CAPRIN1-208ENST00000530008 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-208ENST00000530008 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
CAPRIN1-208ENST00000530008 FLIIQ13045 1269 aa11.99□□□□□ -0.49
CAPRIN1-208ENST00000530008 HAX1O00165 279 aa11.97□□□□□ -0.49
CAPRIN1-208ENST00000530008 EVX2Q03828 476 aa11.97□□□□□ -0.49
CAPRIN1-208ENST00000530008 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
CAPRIN1-208ENST00000530008 MS4A1P11836 297 aa11.95□□□□□ -0.5
CAPRIN1-208ENST00000530008 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
CAPRIN1-208ENST00000530008 C1orf115Q9H7X2 142 aa11.93□□□□□ -0.5
CAPRIN1-208ENST00000530008 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-208ENST00000530008 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-208ENST00000530008 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-208ENST00000530008 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-208ENST00000530008 SEC24BO95487 1268 aa11.91□□□□□ -0.5
CAPRIN1-208ENST00000530008 CDHR5Q9HBB8 845 aa11.91□□□□□ -0.5
CAPRIN1-208ENST00000530008 ARID3AQ99856 593 aa11.9□□□□□ -0.5
CAPRIN1-208ENST00000530008 NPDC1Q9NQX5 325 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-208ENST00000530008 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-208ENST00000530008 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-208ENST00000530008 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
CAPRIN1-208ENST00000530008 EPAS1Q99814 870 aa11.88□□□□□ -0.51
CAPRIN1-208ENST00000530008 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
CAPRIN1-208ENST00000530008 PHF14O94880 888 aa11.87□□□□□ -0.51
CAPRIN1-208ENST00000530008 CLCN1P35523 988 aa11.87□□□□□ -0.51
CAPRIN1-208ENST00000530008 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
CAPRIN1-208ENST00000530008 APBB1O00213 710 aa11.86□□□□□ -0.51
CAPRIN1-208ENST00000530008 SLC34A2O95436 690 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms